RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 HEPN1Q6WQI6 88 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 OR10G4Q8NGN3 311 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 RAB39BQ96DA2 213 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 VSIRQ9H7M9 311 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 TEX15Q9BXT5 2789 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 FAM90A27PA6NNH2 459 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 C17orf112F2Z3M2 114 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 M0R036 132 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 SOX15O60248 233 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 IFNA1P01562 189 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 MDKP21741 143 aaPredicted RBP12.22□□□□□ -0.45
GABPB1-202ENST00000359031 RTL8BQ17RB0 113 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 CCL17Q92583 94 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 NEUROG1Q92886 237 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 AIFM2Q9BRQ8 373 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 GGACTQ9BVM4 153 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 CISD1Q9NZ45 108 aaKnown RBP12.22□□□□□ -0.45
GABPB1-202ENST00000359031 KAAG1Q9UBP8 84 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 TCF19Q9Y242 345 aa12.22□□□□□ -0.45
GABPB1-202ENST00000359031 DIDO1Q9BTC0 2240 aaKnown RBP12.22□□□□□ -0.45
GABPB1-202ENST00000359031 LRRK2Q5S007 2527 aa12.21□□□□□ -0.45
GABPB1-202ENST00000359031 C7orf77A4D0Y5 90 aa12.21□□□□□ -0.46
GABPB1-202ENST00000359031 MAP1LC3B2A6NCE7 125 aa12.21□□□□□ -0.46
GABPB1-202ENST00000359031 H7C2Y5 167 aa12.21□□□□□ -0.46
GABPB1-202ENST00000359031 CCL21O00585 134 aa12.21□□□□□ -0.46
GABPB1-202ENST00000359031 NDUFA2O43678 99 aa12.21□□□□□ -0.46
GABPB1-202ENST00000359031 BCL2P10415 239 aa12.21□□□□□ -0.46
GABPB1-202ENST00000359031 PMS2P11Q13670 270 aa12.21□□□□□ -0.46
GABPB1-202ENST00000359031 OR4A47Q6IF82 309 aa12.21□□□□□ -0.46
GABPB1-202ENST00000359031 FAM71F2Q6NXP2 309 aa12.21□□□□□ -0.46
GABPB1-202ENST00000359031 ZNF833PQ6ZTB9 187 aa12.21□□□□□ -0.46
GABPB1-202ENST00000359031 VKORC1L1Q8N0U8 176 aa12.21□□□□□ -0.46
GABPB1-202ENST00000359031 C15orf54Q8N8G6 183 aa12.21□□□□□ -0.46
GABPB1-202ENST00000359031 ZNF709Q8N972 641 aa12.21□□□□□ -0.46
GABPB1-202ENST00000359031 RXFP4Q8TDU9 374 aa12.21□□□□□ -0.46
GABPB1-202ENST00000359031 RHOVQ96L33 236 aa12.21□□□□□ -0.46
GABPB1-202ENST00000359031 NPCDR1Q9BY65 106 aa12.21□□□□□ -0.46
GABPB1-202ENST00000359031 MAP1LC3BQ9GZQ8 125 aa12.21□□□□□ -0.46
GABPB1-202ENST00000359031 RPS10P5Q9NQ39 176 aa12.21□□□□□ -0.46
GABPB1-202ENST00000359031 HEYLQ9NQ87 328 aaPredicted RBP12.21□□□□□ -0.46
GABPB1-202ENST00000359031 IGHV1-69-2A0A0G2JMI3 117 aa12.2□□□□□ -0.46
GABPB1-202ENST00000359031 HOXA1P49639 335 aaPredicted RBP12.2□□□□□ -0.46
GABPB1-202ENST00000359031 FLI1Q01543 452 aaPredicted RBP12.2□□□□□ -0.46
GABPB1-202ENST00000359031 TFF3Q07654 80 aa12.2□□□□□ -0.46
GABPB1-202ENST00000359031 ACSM6Q6P461 480 aa12.2□□□□□ -0.46
GABPB1-202ENST00000359031 LCN15Q6UWW0 184 aa12.2□□□□□ -0.46
GABPB1-202ENST00000359031 C8orf31Q8N9H6 132 aa12.2□□□□□ -0.46
GABPB1-202ENST00000359031 TUBA4BQ9H853 241 aa12.2□□□□□ -0.46
GABPB1-202ENST00000359031 SLC35D1Q9NTN3 355 aa12.2□□□□□ -0.46
GABPB1-202ENST00000359031 TMEM14BQ9NUH8 114 aa12.2□□□□□ -0.46
GABPB1-202ENST00000359031 GNG13Q9P2W3 67 aa12.2□□□□□ -0.46
GABPB1-202ENST00000359031 WDR83OSQ9Y284 106 aa12.2□□□□□ -0.46
GABPB1-202ENST00000359031 TRAV3A0A0B4J244 114 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 CTXND1A0A1B0GTU2 59 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 MPDU1O75352 247 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 FCN3O75636 299 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 IFNA10P01566 189 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 SNRNP70P08621 437 aaKnown RBP12.19□□□□□ -0.46
GABPB1-202ENST00000359031 CT45A6P0DMU7 189 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 CT45A5P0DMU8 189 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 CT45A7P0DMV0 189 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 RAB11AP62491 216 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 DLK1P80370 383 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 AKIRIN2Q53H80 203 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 TMEM200BQ69YZ2 307 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 SSX7Q7RTT5 188 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 PRNDQ9UKY0 176 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 TET2Q6N021 2002 aaPredicted RBP12.19□□□□□ -0.46
GABPB1-202ENST00000359031 CCL3L1P16619 93 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 HSPE1P61604 102 aaKnown RBP12.19□□□□□ -0.46
GABPB1-202ENST00000359031 FFAR4Q5NUL3 377 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 LYPD2Q6UXB3 125 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 ETV3LQ6ZN32 361 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 LINC00311Q8N616 119 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 CYB561D1Q8N8Q1 229 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 ZNF596Q8TC21 504 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 H1FXQ92522 213 aaKnown RBP12.19□□□□□ -0.46
GABPB1-202ENST00000359031 P2RX4Q99571 388 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 ENY2Q9NPA8 101 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 SLC39A9Q9NUM3 307 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 CTSZQ9UBR2 303 aa12.19□□□□□ -0.46
GABPB1-202ENST00000359031 RELNP78509 3460 aa12.18□□□□□ -0.46
GABPB1-202ENST00000359031 PRSS46E5RG02 174 aa12.18□□□□□ -0.46
GABPB1-202ENST00000359031 DVL1O14640 695 aa12.18□□□□□ -0.46
GABPB1-202ENST00000359031 IGKV1D-33P01593 117 aa12.18□□□□□ -0.46
GABPB1-202ENST00000359031 IGKV1-33P01594 117 aa12.18□□□□□ -0.46
GABPB1-202ENST00000359031 APOA2P02652 100 aa12.18□□□□□ -0.46
GABPB1-202ENST00000359031 IL6RP08887 468 aaPredicted RBP12.18□□□□□ -0.46
GABPB1-202ENST00000359031 LOXP28300 417 aaPredicted RBP12.18□□□□□ -0.46
GABPB1-202ENST00000359031 CD1BP29016 333 aa12.18□□□□□ -0.46
GABPB1-202ENST00000359031 TAGLN2P37802 199 aaKnown RBP12.18□□□□□ -0.46
GABPB1-202ENST00000359031 UQCRFS1P47985 274 aa12.18□□□□□ -0.46
GABPB1-202ENST00000359031 RPS16P62249 146 aaKnown RBP12.18□□□□□ -0.46
GABPB1-202ENST00000359031 FAM122CQ6P4D5 195 aa12.18□□□□□ -0.46
GABPB1-202ENST00000359031 RPP25LQ8N5L8 163 aaKnown RBP12.18□□□□□ -0.46
GABPB1-202ENST00000359031 OR10G9Q8NGN4 311 aa12.18□□□□□ -0.46
GABPB1-202ENST00000359031 OR10G7Q8NGN6 311 aa12.18□□□□□ -0.46
GABPB1-202ENST00000359031 OR13D1Q8NGV5 346 aa12.18□□□□□ -0.46
GABPB1-202ENST00000359031 LINC01560Q8TB33 94 aa12.18□□□□□ -0.46
GABPB1-202ENST00000359031 ACTR3CQ9C0K3 210 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms