RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 SDF2L1Q9HCN8 221 aa11.81□□□□□ -0.52
NIPAL3-203ENST00000358028 MANBALQ9NQG1 85 aa11.81□□□□□ -0.52
NIPAL3-203ENST00000358028 CEBPZOSA8MTT3 80 aa11.8□□□□□ -0.52
NIPAL3-203ENST00000358028 TMEM250H0YL14 139 aa11.8□□□□□ -0.52
NIPAL3-203ENST00000358028 CLDN34H7C241 214 aa11.8□□□□□ -0.52
NIPAL3-203ENST00000358028 F2RL2O00254 374 aa11.8□□□□□ -0.52
NIPAL3-203ENST00000358028 NQO2P16083 231 aa11.8□□□□□ -0.52
NIPAL3-203ENST00000358028 CD40P25942 277 aa11.8□□□□□ -0.52
NIPAL3-203ENST00000358028 ELLP55199 621 aaPredicted RBP11.8□□□□□ -0.52
NIPAL3-203ENST00000358028 C22orf34Q6ZV56 151 aa11.8□□□□□ -0.52
NIPAL3-203ENST00000358028 RPP25LQ8N5L8 163 aaKnown RBP11.8□□□□□ -0.52
NIPAL3-203ENST00000358028 ZNRF1Q8ND25 227 aa11.8□□□□□ -0.52
NIPAL3-203ENST00000358028 RNASE6Q93091 150 aaKnown RBP11.8□□□□□ -0.52
NIPAL3-203ENST00000358028 NCOR1P1Q9H4R4 102 aa11.8□□□□□ -0.52
NIPAL3-203ENST00000358028 RNF7Q9UBF6 113 aa11.8□□□□□ -0.52
NIPAL3-203ENST00000358028 CLN8Q9UBY8 286 aa11.8□□□□□ -0.52
NIPAL3-203ENST00000358028 C17orf112F2Z3M2 114 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 RBFOX2O43251 390 aaKnown RBP eCLIP11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 IGHV1-46P01743 117 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 HOXA5P20719 270 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 MDKP21741 143 aaPredicted RBP11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 CCKARP32238 428 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 DUTP33316 252 aaKnown RBP11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 FGF8P55075 233 aaPredicted RBP11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 EDDM3BP56851 147 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 LINC00205P59089 165 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 ERVFRD-1P60508 538 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 B2MP61769 119 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 TNFAIP6P98066 277 aaPredicted RBP11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 NCR3LG1Q68D85 454 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 C1orf87Q8N0U7 546 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 ZNF709Q8N972 641 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 ACTR3CQ9C0K3 210 aaPredicted RBP11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 CALYQ9NYX4 217 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 OR6C3Q9NZP0 311 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 CREBBPQ92793 2442 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 OPN1MWP04001 364 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 CXCL1P09341 107 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 OPN1MW2P0DN77 364 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 OPN1MW3P0DN78 364 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 FGF7P21781 194 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 PSMB3P49720 205 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 LOXL3P58215 753 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 RPP30P78346 268 aaKnown RBP11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 MEF2BQ02080 365 aaPredicted RBP11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 ZNF674Q2M3X9 581 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 FAM201AQ5SY85 155 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 CYP2G1PQ6ZSU1 146 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 R3HDM4Q96D70 268 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 RAB9BQ9NP90 201 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 IL19Q9UHD0 177 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 NAT8Q9UHE5 227 aa11.79□□□□□ -0.52
NIPAL3-203ENST00000358028 MARCH11A6NNE9 402 aa11.78□□□□□ -0.52
NIPAL3-203ENST00000358028 ITGB1BP1O14713 200 aa11.78□□□□□ -0.52
NIPAL3-203ENST00000358028 PROP1O75360 226 aa11.78□□□□□ -0.52
NIPAL3-203ENST00000358028 HPRT1P00492 218 aa11.78□□□□□ -0.52
NIPAL3-203ENST00000358028 KIR2DS2P43631 304 aa11.78□□□□□ -0.52
NIPAL3-203ENST00000358028 WDR25Q64LD2 544 aaPredicted RBP11.78□□□□□ -0.52
NIPAL3-203ENST00000358028 ZNF343Q6P1L6 599 aa11.78□□□□□ -0.52
NIPAL3-203ENST00000358028 ACSM6Q6P461 480 aa11.78□□□□□ -0.52
NIPAL3-203ENST00000358028 NUP37Q8NFH4 326 aa11.78□□□□□ -0.52
NIPAL3-203ENST00000358028 OR10G9Q8NGN4 311 aa11.78□□□□□ -0.52
NIPAL3-203ENST00000358028 OR10G7Q8NGN6 311 aa11.78□□□□□ -0.52
NIPAL3-203ENST00000358028 OR52E5Q8NH55 327 aa11.78□□□□□ -0.52
NIPAL3-203ENST00000358028 PLPPR2Q96GM1 343 aa11.78□□□□□ -0.52
NIPAL3-203ENST00000358028 DIRC2Q96SL1 478 aa11.78□□□□□ -0.52
NIPAL3-203ENST00000358028 GCM1Q9NP62 436 aa11.78□□□□□ -0.52
NIPAL3-203ENST00000358028 CSMD2Q7Z408 3487 aa11.78□□□□□ -0.52
NIPAL3-203ENST00000358028 TRBV24-1A0A075B6N3 115 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 M0R1X1 148 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 FCGR3BO75015 233 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 CLN5O75503 358 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 KBTBD11O94819 623 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 IGKV1D-33P01593 117 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 IGKV1-33P01594 117 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 CGB3P0DN86 165 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 CGB7P0DN87 165 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 SELLP14151 372 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 TNFSF4P23510 183 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 CDX1P47902 265 aaPredicted RBP11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 TMEM249Q2WGJ8 235 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 PDLIM3Q53GG5 364 aaPredicted RBP11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 FFAR4Q5NUL3 377 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 STUMQ69YW2 141 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 DMRTC2Q8IXT2 367 aaPredicted RBP11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 NANPQ8TBE9 248 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 ZDHHC16Q969W1 377 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 SDSLQ96GA7 329 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 NPCDR1Q9BY65 106 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 IFI27L2Q9H2X8 130 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 ELOVL5Q9NYP7 299 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 GAB2Q9UQC2 676 aa11.77□□□□□ -0.52
NIPAL3-203ENST00000358028 RAI1Q7Z5J4 1906 aaPredicted RBP11.77□□□□□ -0.53
NIPAL3-203ENST00000358028 TGIF2-C20orf24A0A0A6YYL0 155 aa11.77□□□□□ -0.53
NIPAL3-203ENST00000358028 CYB5BO43169 146 aa11.77□□□□□ -0.53
NIPAL3-203ENST00000358028 MPDU1O75352 247 aa11.77□□□□□ -0.53
NIPAL3-203ENST00000358028 RBMXL2O75526 392 aaKnown RBP11.77□□□□□ -0.53
NIPAL3-203ENST00000358028 COX6B1P14854 86 aa11.77□□□□□ -0.53
NIPAL3-203ENST00000358028 CD81P60033 236 aa11.77□□□□□ -0.53
NIPAL3-203ENST00000358028 SPCS3P61009 180 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms