RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 REG1BP48304 166 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 SLC25A47Q6Q0C1 308 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 TMEM186Q96B77 213 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 ST20Q9HBF5 79 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 DDX60Q8IY21 1712 aaKnown RBP10.98□□□□□ -0.65
SMC4-202ENST00000357388 TRBV7-9A0A0J9YWB2 115 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 HOXA3O43365 443 aaPredicted RBP10.98□□□□□ -0.65
SMC4-202ENST00000357388 APELAP0DMC3 54 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 COX5BP10606 129 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 CNTFRP26992 372 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 ASIPP42127 132 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 FUT5Q11128 374 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 LDLRAD2Q5SZI1 272 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 CCL13Q99616 98 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 DCTN5Q9BTE1 182 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 SSBP3Q9BWW4 388 aaPredicted RBP10.98□□□□□ -0.65
SMC4-202ENST00000357388 FER1L6Q2WGJ9 1857 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 F5P12259 2224 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 PSG4Q00888 419 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 IMMP2LQ96T52 175 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 hCG_38984A0A1B0GV85 526 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 TMEM14DPA8MWL7 114 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 FOXH1O75593 365 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 NTN1O95631 604 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 DNASE2BQ8WZ79 361 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 RPRMQ9NS64 109 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 DLL3Q9NYJ7 618 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 CALYQ9NYX4 217 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 A0A1W2PPE3 182 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 PEX7O00628 323 aa10.98□□□□□ -0.65
SMC4-202ENST00000357388 PTGDSP41222 190 aa10.97□□□□□ -0.65
SMC4-202ENST00000357388 HCP5Q6MZN7 132 aa10.97□□□□□ -0.65
SMC4-202ENST00000357388 BHLHA9Q7RTU4 235 aa10.97□□□□□ -0.65
SMC4-202ENST00000357388 ZAR1Q86SH2 424 aa10.97□□□□□ -0.65
SMC4-202ENST00000357388 IGLV1-36A0A0B4J1U3 117 aa10.97□□□□□ -0.65
SMC4-202ENST00000357388 FOXA3P55318 350 aaPredicted RBP10.97□□□□□ -0.65
SMC4-202ENST00000357388 VKORC1L1Q8N0U8 176 aa10.97□□□□□ -0.65
SMC4-202ENST00000357388 KCNK17Q96T54 332 aa10.97□□□□□ -0.65
SMC4-202ENST00000357388 MGST2Q99735 147 aa10.97□□□□□ -0.65
SMC4-202ENST00000357388 KNL1Q8NG31 2342 aa10.97□□□□□ -0.65
SMC4-202ENST00000357388 IGHV3OR16-12A0A075B7B8 117 aa10.97□□□□□ -0.65
SMC4-202ENST00000357388 CHCHD1Q96BP2 118 aaKnown RBP10.97□□□□□ -0.65
SMC4-202ENST00000357388 HAX1O00165 279 aa10.97□□□□□ -0.65
SMC4-202ENST00000357388 PAX2Q02962 417 aa10.97□□□□□ -0.65
SMC4-202ENST00000357388 ACSF3Q4G176 576 aaPredicted RBP10.97□□□□□ -0.65
SMC4-202ENST00000357388 GAGE13Q4V321 117 aa10.97□□□□□ -0.65
SMC4-202ENST00000357388 RFLNBQ8N5W9 214 aa10.97□□□□□ -0.65
SMC4-202ENST00000357388 OR9G4Q8NGQ1 327 aa10.97□□□□□ -0.65
SMC4-202ENST00000357388 EEF1AKMT3Q96AZ1 226 aa10.97□□□□□ -0.65
SMC4-202ENST00000357388 FNDC4Q9H6D8 234 aaPredicted RBP10.97□□□□□ -0.65
SMC4-202ENST00000357388 TNFRSF18Q9Y5U5 241 aa10.97□□□□□ -0.65
SMC4-202ENST00000357388 SLC25A20O43772 301 aa10.96□□□□□ -0.65
SMC4-202ENST00000357388 ZNF815PA8K554 130 aa10.96□□□□□ -0.65
SMC4-202ENST00000357388 J3QW42 95 aa10.96□□□□□ -0.65
SMC4-202ENST00000357388 SERF1AO75920 110 aa10.96□□□□□ -0.65
SMC4-202ENST00000357388 NPPCP23582 126 aa10.96□□□□□ -0.65
SMC4-202ENST00000357388 ATP5G2Q06055 141 aa10.96□□□□□ -0.65
SMC4-202ENST00000357388 Q5BKY6 102 aa10.96□□□□□ -0.65
SMC4-202ENST00000357388 ST6GALNAC6Q969X2 333 aa10.96□□□□□ -0.65
SMC4-202ENST00000357388 C18orf15Q96N68 181 aa10.96□□□□□ -0.65
SMC4-202ENST00000357388 DUX5Q96PT3 197 aa10.96□□□□□ -0.65
SMC4-202ENST00000357388 RIPPLY3P57055 190 aa10.96□□□□□ -0.66
SMC4-202ENST00000357388 SNRPD3P62318 126 aaKnown RBP10.96□□□□□ -0.66
SMC4-202ENST00000357388 ATXN8Q156A1 80 aa10.96□□□□□ -0.66
SMC4-202ENST00000357388 ZNF818PQ6ZRF7 136 aa10.96□□□□□ -0.66
SMC4-202ENST00000357388 NHP2Q9NX24 153 aaKnown RBP10.96□□□□□ -0.66
SMC4-202ENST00000357388 MYO5AQ9Y4I1 1855 aaKnown RBP10.96□□□□□ -0.66
SMC4-202ENST00000357388 TMEM229AB2RXF0 380 aa10.96□□□□□ -0.66
SMC4-202ENST00000357388 NPIPB4C9JG80 1138 aa10.96□□□□□ -0.66
SMC4-202ENST00000357388 LINC00305Q7Z4B0 112 aa10.96□□□□□ -0.66
SMC4-202ENST00000357388 CENPVQ7Z7K6 275 aaPredicted RBP10.96□□□□□ -0.66
SMC4-202ENST00000357388 C9orf40Q8IXQ3 194 aa10.96□□□□□ -0.66
SMC4-202ENST00000357388 KIR3DL3Q8N743 410 aa10.96□□□□□ -0.66
SMC4-202ENST00000357388 ZNF721Q8TF20 911 aa10.96□□□□□ -0.66
SMC4-202ENST00000357388 SMPXQ9UHP9 88 aa10.96□□□□□ -0.66
SMC4-202ENST00000357388 A0A1W2PPV9 198 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 TNFSF13O75888 250 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 DPM2O94777 84 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 NUTF2P61970 127 aaKnown RBP10.95□□□□□ -0.66
SMC4-202ENST00000357388 WISP3O95389 354 aaPredicted RBP10.95□□□□□ -0.66
SMC4-202ENST00000357388 IGHMP01871 453 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 ZP1P60852 638 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 ST6GALNAC3Q8NDV1 305 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 COLQQ9Y215 455 aaPredicted RBP10.95□□□□□ -0.66
SMC4-202ENST00000357388 RGPD1P0DJD0 1748 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 NPIPB11E5RHQ5 1161 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 SRSF6Q13247 344 aaKnown RBP10.95□□□□□ -0.66
SMC4-202ENST00000357388 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.95□□□□□ -0.66
SMC4-202ENST00000357388 ZNF501Q96CX3 271 aaPredicted RBP10.95□□□□□ -0.66
SMC4-202ENST00000357388 ZNF479Q96JC4 524 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 ZNF385AQ96PM9 386 aaKnown RBP10.95□□□□□ -0.66
SMC4-202ENST00000357388 CCL19Q99731 98 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 PIN1P1O15428 100 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 DLEU1O43261 78 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 PAX1P15863 534 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 ZNF585BQ52M93 769 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 ITLN1Q8WWA0 313 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 SLC25A15Q9Y619 301 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 NRXN3Q9Y4C0 1643 aa10.95□□□□□ -0.66
SMC4-202ENST00000357388 NRAPQ86VF7 1730 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms