RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 CX3CL1P78423 397 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 PRSS8Q16651 343 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 HSPB9Q9BQS6 159 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 GON7Q9BXV9 100 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 OR51J1Q9H342 316 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 TPSG1Q9NRR2 321 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 SERTAD4Q9NUC0 356 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 NUDT15Q9NV35 164 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 FLVCR2Q9UPI3 526 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 NUBP2Q9Y5Y2 271 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 CNIH1O95406 144 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 IGF1P05019 195 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 MAS1LP35410 378 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 G6PCP35575 357 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 SUPT4H1P63272 117 aaKnown RBP12.29□□□□□ -0.44
TRIM13-201ENST00000356017 ZNF695Q8IW36 515 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 DUSP18Q8NEJ0 188 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 IL22RA2Q969J5 263 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 SEC22AQ96IW7 307 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 TMEM56Q96MV1 263 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 ZNF430Q9H8G1 570 aaPredicted RBP12.29□□□□□ -0.44
TRIM13-201ENST00000356017 TMEM140Q9NV12 185 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 ZNF580Q9UK33 172 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 TMEM56-RWDD3S4R434 201 aa12.29□□□□□ -0.44
TRIM13-201ENST00000356017 IGKV1-39P01597 117 aa12.28□□□□□ -0.44
TRIM13-201ENST00000356017 IGKV1D-39P04432 117 aa12.28□□□□□ -0.44
TRIM13-201ENST00000356017 IL6RP08887 468 aaPredicted RBP12.28□□□□□ -0.44
TRIM13-201ENST00000356017 AKR1C2P52895 323 aa12.28□□□□□ -0.44
TRIM13-201ENST00000356017 RPL8P62917 257 aaKnown RBP12.28□□□□□ -0.44
TRIM13-201ENST00000356017 PJVKQ0ZLH3 352 aa12.28□□□□□ -0.44
TRIM13-201ENST00000356017 TMEM187Q14656 261 aa12.28□□□□□ -0.44
TRIM13-201ENST00000356017 FXYD3Q14802 87 aa12.28□□□□□ -0.44
TRIM13-201ENST00000356017 AWAT1Q58HT5 328 aa12.28□□□□□ -0.44
TRIM13-201ENST00000356017 H2BFWTQ7Z2G1 175 aa12.28□□□□□ -0.44
TRIM13-201ENST00000356017 CHPT1Q8WUD6 406 aa12.28□□□□□ -0.44
TRIM13-201ENST00000356017 RBPMSQ93062 196 aaKnown RBP12.28□□□□□ -0.44
TRIM13-201ENST00000356017 RRNAD1Q96FB5 475 aaKnown RBP12.28□□□□□ -0.44
TRIM13-201ENST00000356017 SNAPC5O75971 98 aa12.27□□□□□ -0.44
TRIM13-201ENST00000356017 SFT2D2O95562 160 aa12.27□□□□□ -0.44
TRIM13-201ENST00000356017 H2AFB2P0C5Z0 115 aa12.27□□□□□ -0.44
TRIM13-201ENST00000356017 OR4E1P0C645 316 aa12.27□□□□□ -0.44
TRIM13-201ENST00000356017 GNB1P62873 340 aa12.27□□□□□ -0.44
TRIM13-201ENST00000356017 TMEM267Q0VDI3 215 aaPredicted RBP12.27□□□□□ -0.44
TRIM13-201ENST00000356017 PPP1R1AQ13522 171 aa12.27□□□□□ -0.44
TRIM13-201ENST00000356017 ATRQ13535 2644 aa12.27□□□□□ -0.44
TRIM13-201ENST00000356017 TNXAQ16473 311 aa12.27□□□□□ -0.44
TRIM13-201ENST00000356017 C4orf46Q504U0 113 aa12.27□□□□□ -0.44
TRIM13-201ENST00000356017 NRARPQ7Z6K4 114 aa12.27□□□□□ -0.44
TRIM13-201ENST00000356017 FAM219AQ8IW50 185 aa12.27□□□□□ -0.44
TRIM13-201ENST00000356017 LGI3Q8N145 548 aa12.27□□□□□ -0.44
TRIM13-201ENST00000356017 ARPC1AQ92747 370 aa12.27□□□□□ -0.44
TRIM13-201ENST00000356017 PARP11Q9NR21 331 aa12.27□□□□□ -0.44
TRIM13-201ENST00000356017 TRAV6A0A075B6T7 132 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 LINC01548A6NM66 108 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 UPK2O00526 184 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 HLA-AP01891 365 aaKnown RBP12.26□□□□□ -0.45
TRIM13-201ENST00000356017 ANXA7P20073 488 aaKnown RBP12.26□□□□□ -0.45
TRIM13-201ENST00000356017 RAB25P57735 213 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 PROK1P58294 105 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 MRGPRG-AS1Q2M3A8 158 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 TMEM95Q3KNT9 176 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 TMEM268Q5VZI3 342 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 PLET1Q6UQ28 207 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 STPG2Q8N412 459 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 RNASE11Q8TAA1 199 aaKnown RBP12.26□□□□□ -0.45
TRIM13-201ENST00000356017 ABHD5Q8WTS1 349 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 WNT10AQ9GZT5 417 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 FKBP11Q9NYL4 201 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 C9orf170A2RU37 121 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 HAX1O00165 279 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 ATP6V0E1O15342 81 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 HLA-GP17693 338 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 VDAC1P21796 283 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 MECP2P51608 486 aaKnown RBP12.26□□□□□ -0.45
TRIM13-201ENST00000356017 SLC35B1P78383 322 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 C12orf54Q6X4T0 127 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 CENPVQ7Z7K6 275 aaPredicted RBP12.26□□□□□ -0.45
TRIM13-201ENST00000356017 SELENOHQ8IZQ5 122 aaKnown RBP12.26□□□□□ -0.45
TRIM13-201ENST00000356017 SGMS2Q8NHU3 365 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 TMEM68Q96MH6 324 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 COMMD5Q9GZQ3 224 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 PRNDQ9UKY0 176 aa12.26□□□□□ -0.45
TRIM13-201ENST00000356017 FBN1P35555 2871 aaKnown RBP12.25□□□□□ -0.45
TRIM13-201ENST00000356017 A0A0B4J2A0 478 aa12.25□□□□□ -0.45
TRIM13-201ENST00000356017 DUXBA0A1W2PPF3 345 aa12.25□□□□□ -0.45
TRIM13-201ENST00000356017 PTTG1O95997 202 aa12.25□□□□□ -0.45
TRIM13-201ENST00000356017 IGKV1-5P01602 117 aa12.25□□□□□ -0.45
TRIM13-201ENST00000356017 CRIP2P52943 208 aaPredicted RBP12.25□□□□□ -0.45
TRIM13-201ENST00000356017 DHRS2Q13268 280 aa12.25□□□□□ -0.45
TRIM13-201ENST00000356017 LYG2Q86SG7 212 aa12.25□□□□□ -0.45
TRIM13-201ENST00000356017 KLHDC1Q8N7A1 406 aa12.25□□□□□ -0.45
TRIM13-201ENST00000356017 LRTM2Q8N967 370 aa12.25□□□□□ -0.45
TRIM13-201ENST00000356017 OR4A16Q8NH70 328 aa12.25□□□□□ -0.45
TRIM13-201ENST00000356017 GRPEL2Q8TAA5 225 aa12.25□□□□□ -0.45
TRIM13-201ENST00000356017 LHFPL5Q8TAF8 219 aa12.25□□□□□ -0.45
TRIM13-201ENST00000356017 CASTOR1Q8WTX7 329 aa12.25□□□□□ -0.45
TRIM13-201ENST00000356017 SRSF12Q8WXF0 261 aaKnown RBP12.25□□□□□ -0.45
TRIM13-201ENST00000356017 LSM10Q969L4 123 aaKnown RBP12.25□□□□□ -0.45
TRIM13-201ENST00000356017 NOL4LQ96MY1 436 aaPredicted RBP12.25□□□□□ -0.45
TRIM13-201ENST00000356017 MDFIQ99750 246 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms