RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 TRAV3A0A0B4J244 114 aa12.55□□□□□ -0.4
CTSA-202ENST00000354880 RNF222A6NCQ9 220 aa12.55□□□□□ -0.4
CTSA-202ENST00000354880 J3QLI3 93 aa12.55□□□□□ -0.4
CTSA-202ENST00000354880 KCNAB3O43448 404 aa12.55□□□□□ -0.4
CTSA-202ENST00000354880 SYNGR2O43760 224 aa12.55□□□□□ -0.4
CTSA-202ENST00000354880 CHST1O43916 411 aa12.55□□□□□ -0.4
CTSA-202ENST00000354880 IL6RP08887 468 aaPredicted RBP12.55□□□□□ -0.4
CTSA-202ENST00000354880 AP2S1P53680 142 aaPredicted RBP12.55□□□□□ -0.4
CTSA-202ENST00000354880 OR2B8PP59922 312 aa12.55□□□□□ -0.4
CTSA-202ENST00000354880 AARDQ4LEZ3 155 aa12.55□□□□□ -0.4
CTSA-202ENST00000354880 PUSL1Q8N0Z8 303 aaKnown RBP12.55□□□□□ -0.4
CTSA-202ENST00000354880 AJUBAQ96IF1 538 aa12.55□□□□□ -0.4
CTSA-202ENST00000354880 QTRT1Q9BXR0 403 aaKnown RBP12.55□□□□□ -0.4
CTSA-202ENST00000354880 TEX15Q9BXT5 2789 aa12.55□□□□□ -0.4
CTSA-202ENST00000354880 OR2F2O95006 317 aa12.55□□□□□ -0.4
CTSA-202ENST00000354880 VENTXO95231 258 aa12.55□□□□□ -0.4
CTSA-202ENST00000354880 IGLV2-23P01705 113 aa12.55□□□□□ -0.4
CTSA-202ENST00000354880 NUP62P37198 522 aaPredicted RBP12.55□□□□□ -0.4
CTSA-202ENST00000354880 OR2F1Q13607 317 aa12.55□□□□□ -0.4
CTSA-202ENST00000354880 ZNF345Q14585 488 aa12.55□□□□□ -0.4
CTSA-202ENST00000354880 ZNF429Q86V71 674 aa12.55□□□□□ -0.4
CTSA-202ENST00000354880 VSTM2AQ8TAG5 236 aa12.55□□□□□ -0.4
CTSA-202ENST00000354880 RITA1Q96K30 269 aa12.55□□□□□ -0.4
CTSA-202ENST00000354880 ABCA1O95477 2261 aa12.54□□□□□ -0.4
CTSA-202ENST00000354880 TNCP24821 2201 aa12.54□□□□□ -0.4
CTSA-202ENST00000354880 IGHV3OR16-10A0A075B7F0 116 aa12.54□□□□□ -0.4
CTSA-202ENST00000354880 C15orf61A6NNL5 157 aa12.54□□□□□ -0.4
CTSA-202ENST00000354880 KBTBD11O94819 623 aa12.54□□□□□ -0.4
CTSA-202ENST00000354880 AVPP01185 164 aa12.54□□□□□ -0.4
CTSA-202ENST00000354880 IGHV4-38-2P0DP08 117 aa12.54□□□□□ -0.4
CTSA-202ENST00000354880 UBE2KP61086 200 aa12.54□□□□□ -0.4
CTSA-202ENST00000354880 VAMP2P63027 116 aa12.54□□□□□ -0.4
CTSA-202ENST00000354880 VMA21Q3ZAQ7 101 aa12.54□□□□□ -0.4
CTSA-202ENST00000354880 RUSC1-AS1Q66K80 236 aa12.54□□□□□ -0.4
CTSA-202ENST00000354880 RAB40CQ96S21 281 aa12.54□□□□□ -0.4
CTSA-202ENST00000354880 RNF5Q99942 180 aa12.54□□□□□ -0.4
CTSA-202ENST00000354880 C11orf1Q9H5F2 150 aa12.54□□□□□ -0.4
CTSA-202ENST00000354880 CACFD1Q9UGQ2 172 aa12.54□□□□□ -0.4
CTSA-202ENST00000354880 A0A0D9SG52 128 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 MSGN1A6NI15 193 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 UPK2O00526 184 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 MED6O75586 246 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 IFNA17P01571 189 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 IGKV1D-33P01593 117 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 IGKV1-33P01594 117 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 S100A11P31949 105 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 P2RY1P47900 373 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 AQP10Q96PS8 301 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 TSNAXQ99598 290 aaKnown RBP12.53□□□□□ -0.4
CTSA-202ENST00000354880 ARL6Q9H0F7 186 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 RBKSQ9H477 322 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 TMEM14BQ9NUH8 114 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 PRNDQ9UKY0 176 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 FOXA2Q9Y261 457 aaPredicted RBP12.53□□□□□ -0.4
CTSA-202ENST00000354880 SLC25A17O43808 307 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 TMEM50AO95807 157 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 HKR1P10072 659 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 C4BPBP20851 252 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 RPL12P30050 165 aaKnown RBP12.53□□□□□ -0.4
CTSA-202ENST00000354880 CYB5R2Q6BCY4 276 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 BRD3OSQ6XYD6 125 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 TMUB2Q71RG4 321 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 KCNRGQ8N5I3 272 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 OR52E5Q8NH55 327 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 OR4A5Q8NH83 315 aa12.53□□□□□ -0.4
CTSA-202ENST00000354880 TET2Q6N021 2002 aaPredicted RBP12.52□□□□□ -0.4
CTSA-202ENST00000354880 FLNAP21333 2647 aaKnown RBP12.52□□□□□ -0.4
CTSA-202ENST00000354880 CSPG4Q6UVK1 2322 aa12.52□□□□□ -0.41
CTSA-202ENST00000354880 MOSP00540 346 aa12.52□□□□□ -0.41
CTSA-202ENST00000354880 IAPPP10997 89 aa12.52□□□□□ -0.41
CTSA-202ENST00000354880 CD24P25063 80 aa12.52□□□□□ -0.41
CTSA-202ENST00000354880 CNTFRP26992 372 aa12.52□□□□□ -0.41
CTSA-202ENST00000354880 PAX9P55771 341 aa12.52□□□□□ -0.41
CTSA-202ENST00000354880 SPCS3P61009 180 aa12.52□□□□□ -0.41
CTSA-202ENST00000354880 KLF17Q5JT82 389 aaPredicted RBP12.52□□□□□ -0.41
CTSA-202ENST00000354880 OR2C3Q8N628 320 aa12.52□□□□□ -0.41
CTSA-202ENST00000354880 TMEM167AQ8TBQ9 72 aa12.52□□□□□ -0.41
CTSA-202ENST00000354880 LYRM2Q9NU23 88 aaPredicted RBP12.52□□□□□ -0.41
CTSA-202ENST00000354880 WSB1Q9Y6I7 421 aa12.52□□□□□ -0.41
CTSA-202ENST00000354880 NOTCH2Q04721 2471 aa12.51□□□□□ -0.41
CTSA-202ENST00000354880 CEBPZOSA8MTT3 80 aa12.51□□□□□ -0.41
CTSA-202ENST00000354880 SNRNP70P08621 437 aaKnown RBP12.51□□□□□ -0.41
CTSA-202ENST00000354880 BRS3P32247 399 aa12.51□□□□□ -0.41
CTSA-202ENST00000354880 CAV2P51636 162 aa12.51□□□□□ -0.41
CTSA-202ENST00000354880 HSPE1P61604 102 aaKnown RBP12.51□□□□□ -0.41
CTSA-202ENST00000354880 RPL23AP62750 156 aaKnown RBP12.51□□□□□ -0.41
CTSA-202ENST00000354880 RPL8P62917 257 aaKnown RBP12.51□□□□□ -0.41
CTSA-202ENST00000354880 HES1Q14469 280 aa12.51□□□□□ -0.41
CTSA-202ENST00000354880 OPCMLQ14982 345 aa12.51□□□□□ -0.41
CTSA-202ENST00000354880 PSG5Q15238 335 aa12.51□□□□□ -0.41
CTSA-202ENST00000354880 PDLIM3Q53GG5 364 aaPredicted RBP12.51□□□□□ -0.41
CTSA-202ENST00000354880 CIARTQ8N365 385 aaPredicted RBP12.51□□□□□ -0.41
CTSA-202ENST00000354880 TEX45Q8NA69 505 aa12.51□□□□□ -0.41
CTSA-202ENST00000354880 OR2T10Q8NGZ9 312 aa12.51□□□□□ -0.41
CTSA-202ENST00000354880 DTD1Q8TEA8 209 aa12.51□□□□□ -0.41
CTSA-202ENST00000354880 ZDHHC16Q969W1 377 aa12.51□□□□□ -0.41
CTSA-202ENST00000354880 EAF1Q96JC9 268 aaPredicted RBP12.51□□□□□ -0.41
CTSA-202ENST00000354880 ZC4H2Q9NQZ6 224 aa12.51□□□□□ -0.41
CTSA-202ENST00000354880 FKBP11Q9NYL4 201 aa12.51□□□□□ -0.41
CTSA-202ENST00000354880 NUP50Q9UKX7 468 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms