RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 VDAC2P45880 294 aaPredicted RBP12.74□□□□□ -0.37
MBD1-205ENST00000353909 SPCS3P61009 180 aa12.74□□□□□ -0.37
MBD1-205ENST00000353909 Q8N7P7 452 aa12.74□□□□□ -0.37
MBD1-205ENST00000353909 GAB2Q9UQC2 676 aa12.74□□□□□ -0.37
MBD1-205ENST00000353909 COL12A1Q99715 3063 aa12.73□□□□□ -0.37
MBD1-205ENST00000353909 MAP1LC3B2A6NCE7 125 aa12.73□□□□□ -0.37
MBD1-205ENST00000353909 NKX6-3A6NJ46 265 aa12.73□□□□□ -0.37
MBD1-205ENST00000353909 SRRM4A7MD48 611 aaKnown RBP12.73□□□□□ -0.37
MBD1-205ENST00000353909 H3BQ15 152 aa12.73□□□□□ -0.37
MBD1-205ENST00000353909 OPN1MWP04001 364 aa12.73□□□□□ -0.37
MBD1-205ENST00000353909 OPN1MW2P0DN77 364 aa12.73□□□□□ -0.37
MBD1-205ENST00000353909 OPN1MW3P0DN78 364 aa12.73□□□□□ -0.37
MBD1-205ENST00000353909 COL8A2P25067 703 aa12.73□□□□□ -0.37
MBD1-205ENST00000353909 B2MP61769 119 aa12.73□□□□□ -0.37
MBD1-205ENST00000353909 GNB2P62879 340 aa12.73□□□□□ -0.37
MBD1-205ENST00000353909 GCSAMLQ5JQS6 135 aa12.73□□□□□ -0.37
MBD1-205ENST00000353909 ZFP82Q8N141 532 aa12.73□□□□□ -0.37
MBD1-205ENST00000353909 MAP1LC3BQ9GZQ8 125 aa12.73□□□□□ -0.37
MBD1-205ENST00000353909 TCF19Q9Y242 345 aa12.73□□□□□ -0.37
MBD1-205ENST00000353909 PIEZO1Q92508 2521 aa12.73□□□□□ -0.37
MBD1-205ENST00000353909 REG1BP48304 166 aa12.73□□□□□ -0.37
MBD1-205ENST00000353909 CENPVQ7Z7K6 275 aaPredicted RBP12.73□□□□□ -0.37
MBD1-205ENST00000353909 A0A1W2PPH5 198 aa12.72□□□□□ -0.37
MBD1-205ENST00000353909 CCL21O00585 134 aa12.72□□□□□ -0.37
MBD1-205ENST00000353909 TNFRSF13BO14836 293 aaPredicted RBP12.72□□□□□ -0.37
MBD1-205ENST00000353909 HSPB1P04792 205 aaKnown RBP12.72□□□□□ -0.37
MBD1-205ENST00000353909 DIAPH2-AS1Q14236 149 aa12.72□□□□□ -0.37
MBD1-205ENST00000353909 ATP6V1FQ16864 119 aa12.72□□□□□ -0.37
MBD1-205ENST00000353909 VWC2Q2TAL6 325 aa12.72□□□□□ -0.37
MBD1-205ENST00000353909 FFAR4Q5NUL3 377 aa12.72□□□□□ -0.37
MBD1-205ENST00000353909 SMDT1Q9H4I9 107 aa12.72□□□□□ -0.37
MBD1-205ENST00000353909 NGBQ9NPG2 151 aa12.72□□□□□ -0.37
MBD1-205ENST00000353909 MLXQ9UH92 298 aa12.72□□□□□ -0.37
MBD1-205ENST00000353909 BCL2P10415 239 aa12.72□□□□□ -0.37
MBD1-205ENST00000353909 MDKP21741 143 aaPredicted RBP12.72□□□□□ -0.37
MBD1-205ENST00000353909 CA7P43166 264 aa12.72□□□□□ -0.37
MBD1-205ENST00000353909 THBS3P49746 956 aa12.72□□□□□ -0.37
MBD1-205ENST00000353909 FAM216AQ8WUB2 273 aa12.72□□□□□ -0.37
MBD1-205ENST00000353909 RAB9BQ9NP90 201 aa12.72□□□□□ -0.37
MBD1-205ENST00000353909 NAV3Q8IVL0 2385 aa12.72□□□□□ -0.37
MBD1-205ENST00000353909 C15orf61A6NNL5 157 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 ZNF727A8MUV8 499 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 DVL1O14640 695 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 DLX1P56177 255 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 RAB11AP62491 216 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 KHDC3LQ587J8 217 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 ZNF429Q86V71 674 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 C1orf87Q8N0U7 546 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.71□□□□□ -0.37
MBD1-205ENST00000353909 C2CD4CQ8TF44 421 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 GATAD1Q8WUU5 269 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 LHX4Q969G2 390 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 RAB39BQ96DA2 213 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 ZNF714Q96N38 554 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 SLC39A9Q9NUM3 307 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 CSMD1Q96PZ7 3565 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 AKAP6Q13023 2319 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 SMCO3A2RU48 225 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 FAM90A9PA6NNJ1 464 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 CD1BP29016 333 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 PRB3Q04118 309 aaPredicted RBP12.71□□□□□ -0.37
MBD1-205ENST00000353909 OR10G4Q8NGN3 311 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 OR10G9Q8NGN4 311 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 OR10G7Q8NGN6 311 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 HIST1H2BAQ96A08 127 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 HINT2Q9BX68 163 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 CISD1Q9NZ45 108 aaKnown RBP12.71□□□□□ -0.37
MBD1-205ENST00000353909 TIMM9Q9Y5J7 89 aa12.71□□□□□ -0.37
MBD1-205ENST00000353909 KIR2DS2P43631 304 aa12.7□□□□□ -0.38
MBD1-205ENST00000353909 FAM24BQ8N5W8 94 aa12.7□□□□□ -0.38
MBD1-205ENST00000353909 SPTAN1Q13813 2472 aaKnown RBP12.7□□□□□ -0.38
MBD1-205ENST00000353909 ARHGAP32A7KAX9 2087 aa12.7□□□□□ -0.38
MBD1-205ENST00000353909 PRSS46E5RG02 174 aa12.7□□□□□ -0.38
MBD1-205ENST00000353909 CD3EP07766 207 aa12.7□□□□□ -0.38
MBD1-205ENST00000353909 APOBEC3AP31941 199 aaPredicted RBP12.7□□□□□ -0.38
MBD1-205ENST00000353909 HOXA1P49639 335 aaPredicted RBP12.7□□□□□ -0.38
MBD1-205ENST00000353909 FAM90A2PQ658T7 463 aa12.7□□□□□ -0.38
MBD1-205ENST00000353909 HEPN1Q6WQI6 88 aa12.7□□□□□ -0.38
MBD1-205ENST00000353909 OR13D1Q8NGV5 346 aa12.7□□□□□ -0.38
MBD1-205ENST00000353909 OR52E5Q8NH55 327 aa12.7□□□□□ -0.38
MBD1-205ENST00000353909 CA5BP1Q8WTZ4 195 aa12.7□□□□□ -0.38
MBD1-205ENST00000353909 MRPL20Q9BYC9 149 aaKnown RBP12.7□□□□□ -0.38
MBD1-205ENST00000353909 MS4A5Q9H3V2 200 aa12.7□□□□□ -0.38
MBD1-205ENST00000353909 MED13LQ71F56 2210 aa12.7□□□□□ -0.38
MBD1-205ENST00000353909 VSTM5A8MXK1 200 aa12.7□□□□□ -0.38
MBD1-205ENST00000353909 LOXP28300 417 aaPredicted RBP12.7□□□□□ -0.38
MBD1-205ENST00000353909 GAL3ST2Q9H3Q3 398 aa12.7□□□□□ -0.38
MBD1-205ENST00000353909 SLC35D1Q9NTN3 355 aa12.7□□□□□ -0.38
MBD1-205ENST00000353909 TMEM14BQ9NUH8 114 aa12.7□□□□□ -0.38
MBD1-205ENST00000353909 hCG_1809904A0A1W2PP81 198 aa12.69□□□□□ -0.38
MBD1-205ENST00000353909 A0A1W2PR64 198 aa12.69□□□□□ -0.38
MBD1-205ENST00000353909 A0A1W2PRV1 198 aa12.69□□□□□ -0.38
MBD1-205ENST00000353909 NDUFB3O43676 98 aa12.69□□□□□ -0.38
MBD1-205ENST00000353909 PDLIM3Q53GG5 364 aaPredicted RBP12.69□□□□□ -0.38
MBD1-205ENST00000353909 TREML4Q6UXN2 200 aa12.69□□□□□ -0.38
MBD1-205ENST00000353909 WDR83OSQ9Y284 106 aa12.69□□□□□ -0.38
MBD1-205ENST00000353909 IGHV1-69-2A0A0G2JMI3 117 aa12.69□□□□□ -0.38
MBD1-205ENST00000353909 NDUFA2O43678 99 aa12.69□□□□□ -0.38
MBD1-205ENST00000353909 DLK1P80370 383 aa12.69□□□□□ -0.38
MBD1-205ENST00000353909 ADORA2A-AS1P86434 159 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms