RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 ARHGEF17Q96PE2 2063 aaPredicted RBP8.94□□□□□ -0.98
CAPN3-203ENST00000349748 MT-ATP6P00846 226 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 MT-ND6P03923 174 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 HIST1H1EP10412 219 aaKnown RBP8.93□□□□□ -0.98
CAPN3-203ENST00000349748 CEBPDP49716 269 aaPredicted RBP8.93□□□□□ -0.98
CAPN3-203ENST00000349748 CX3CL1P78423 397 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 TMEM97Q5BJF2 176 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 PET117Q6UWS5 81 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 ACP7Q6ZNF0 438 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 WDR5BQ86VZ2 330 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 TMEM45BQ96B21 275 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 FER1L6-AS2Q96M78 137 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 RNASE7Q9H1E1 156 aaKnown RBP8.93□□□□□ -0.98
CAPN3-203ENST00000349748 FGF22Q9HCT0 170 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 PHPT1Q9NRX4 125 aaPredicted RBP8.93□□□□□ -0.98
CAPN3-203ENST00000349748 TMED7-TICAM2A0A0A6YYA0 188 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 CD300LBA8K4G0 201 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 MS4A18H0YCH9 400 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 NEURL1O76050 574 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 FTH1P19P0C7X4 201 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 COL9A1P20849 921 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 RPL8P62917 257 aaKnown RBP8.93□□□□□ -0.98
CAPN3-203ENST00000349748 MS4A18Q3C1V0 323 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 CCL4L1Q8NHW4 92 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 FLVCR1-AS1Q8TAF5 88 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 STRADBQ9C0K7 418 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 NXF5Q9H1B4 397 aaKnown RBP8.93□□□□□ -0.98
CAPN3-203ENST00000349748 ZNF442Q9H7R0 627 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 ASCC3Q8N3C0 2202 aaKnown RBP8.93□□□□□ -0.98
CAPN3-203ENST00000349748 WDFY4Q6ZS81 3184 aa8.93□□□□□ -0.98
CAPN3-203ENST00000349748 LOC102723996A0A087X1L8 192 aa8.92□□□□□ -0.98
CAPN3-203ENST00000349748 ISLRO14498 428 aa8.92□□□□□ -0.98
CAPN3-203ENST00000349748 IGHMP01871 453 aa8.92□□□□□ -0.98
CAPN3-203ENST00000349748 SCTP09683 121 aa8.92□□□□□ -0.98
CAPN3-203ENST00000349748 GPM6AP51674 278 aa8.92□□□□□ -0.98
CAPN3-203ENST00000349748 CST6Q15828 149 aa8.92□□□□□ -0.98
CAPN3-203ENST00000349748 TNFRSF19Q9NS68 423 aa8.92□□□□□ -0.98
CAPN3-203ENST00000349748 PSG8Q9UQ74 426 aa8.92□□□□□ -0.98
CAPN3-203ENST00000349748 SLC17A4Q9Y2C5 497 aa8.92□□□□□ -0.98
CAPN3-203ENST00000349748 TIMM9Q9Y5J7 89 aa8.92□□□□□ -0.98
CAPN3-203ENST00000349748 KLRC4-KLRK1H3BQV0 150 aa8.92□□□□□ -0.98
CAPN3-203ENST00000349748 PGLYRP1O75594 196 aaPredicted RBP8.92□□□□□ -0.98
CAPN3-203ENST00000349748 CNIH1O95406 144 aa8.92□□□□□ -0.98
CAPN3-203ENST00000349748 CCL1P22362 96 aa8.92□□□□□ -0.98
CAPN3-203ENST00000349748 KIR3DS1Q14943 382 aa8.92□□□□□ -0.98
CAPN3-203ENST00000349748 RNPS1Q15287 305 aaKnown RBP8.92□□□□□ -0.98
CAPN3-203ENST00000349748 VSTM2AQ8TAG5 236 aa8.92□□□□□ -0.98
CAPN3-203ENST00000349748 LINC00470Q9BZP3 86 aa8.92□□□□□ -0.98
CAPN3-203ENST00000349748 ATP23Q9Y6H3 246 aa8.92□□□□□ -0.98
CAPN3-203ENST00000349748 TNRC6AQ8NDV7 1962 aaKnown RBP8.92□□□□□ -0.98
CAPN3-203ENST00000349748 F5H5K5 113 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 H3BRM9 83 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 CA1P00915 261 aaPredicted RBP8.91□□□□□ -0.98
CAPN3-203ENST00000349748 RPL31P62899 125 aaKnown RBP8.91□□□□□ -0.98
CAPN3-203ENST00000349748 SEC11AP67812 179 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 TMEM92Q6UXU6 159 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 DOLPP1Q86YN1 238 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 SPACA3Q8IXA5 215 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 RERGQ96A58 199 aaPredicted RBP8.91□□□□□ -0.98
CAPN3-203ENST00000349748 NPCDR1Q9BY65 106 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 C19orf25Q9UFG5 118 aaPredicted RBP8.91□□□□□ -0.98
CAPN3-203ENST00000349748 CACNA1DQ01668 2161 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 RALGAPA1Q6GYQ0 2036 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 IGKV1-27A0A075B6S5 117 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 H0Y980 276 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 IGKV1-39P01597 117 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 IGKV1D-39P04432 117 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 AMY1AP04745 511 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 GP1BBP13224 206 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 TNFRSF4P43489 277 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 CARD17Q5XLA6 110 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 ADAMTSL5Q6ZMM2 481 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 SHISA6Q6ZSJ9 500 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 TMEM251Q8N6I4 163 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 LSM10Q969L4 123 aaKnown RBP8.91□□□□□ -0.98
CAPN3-203ENST00000349748 RNF183Q96D59 192 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 HINT2Q9BX68 163 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 ZDBF2Q9HCK1 2354 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 TRBV7-9A0A0J9YWB2 115 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 A0A1W2PPM0 123 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 ANKRD30BLA7E2S9 258 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 CRYGCP07315 174 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 BPIFA4PQ86YQ2 179 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 OR2D2Q9H210 308 aa8.91□□□□□ -0.98
CAPN3-203ENST00000349748 A0A1W2PQF6 199 aa8.9□□□□□ -0.98
CAPN3-203ENST00000349748 A0A1W2PQU0 124 aa8.9□□□□□ -0.98
CAPN3-203ENST00000349748 SYS1-DBNDD2H3BUS1 97 aa8.9□□□□□ -0.98
CAPN3-203ENST00000349748 ARL14EPLP0DKL9 152 aa8.9□□□□□ -0.98
CAPN3-203ENST00000349748 F2RP25116 425 aa8.9□□□□□ -0.98
CAPN3-203ENST00000349748 TCTAP57738 103 aa8.9□□□□□ -0.98
CAPN3-203ENST00000349748 FUT7Q11130 342 aa8.9□□□□□ -0.98
CAPN3-203ENST00000349748 DEFB110Q30KQ9 67 aa8.9□□□□□ -0.98
CAPN3-203ENST00000349748 SLC35E4Q6ICL7 350 aa8.9□□□□□ -0.98
CAPN3-203ENST00000349748 TPRX1Q8N7U7 411 aa8.9□□□□□ -0.98
CAPN3-203ENST00000349748 OR5A1Q8NGJ0 315 aa8.9□□□□□ -0.98
CAPN3-203ENST00000349748 SPATA25Q9BR10 227 aa8.9□□□□□ -0.98
CAPN3-203ENST00000349748 DEPPQ9NTK1 212 aa8.9□□□□□ -0.98
CAPN3-203ENST00000349748 HIF1ANQ9NWT6 349 aa8.9□□□□□ -0.98
CAPN3-203ENST00000349748 YTHDF2Q9Y5A9 579 aaKnown RBP8.9□□□□□ -0.98
CAPN3-203ENST00000349748 BDP1A6H8Y1 2624 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms