RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 FAM3BP58499 235 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-202ENST00000342494 NABP2Q9BQ15 211 aa12.73□□□□□ -0.37
UBE3B-202ENST00000342494 S4R3C0 116 aa12.73□□□□□ -0.37
UBE3B-202ENST00000342494 IGHV3-66A0A0C4DH42 116 aa12.73□□□□□ -0.37
UBE3B-202ENST00000342494 C9JCJ5 164 aa12.73□□□□□ -0.37
UBE3B-202ENST00000342494 PIN1P1O15428 100 aa12.73□□□□□ -0.37
UBE3B-202ENST00000342494 ATP5IP56385 69 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-202ENST00000342494 C11orf91Q3C1V1 193 aa12.73□□□□□ -0.37
UBE3B-202ENST00000342494 GOLT1AQ6ZVE7 132 aa12.73□□□□□ -0.37
UBE3B-202ENST00000342494 C7orf66A4D0T2 115 aa12.72□□□□□ -0.37
UBE3B-202ENST00000342494 SGK494Q96LW2 274 aa12.72□□□□□ -0.37
UBE3B-202ENST00000342494 ATG101Q9BSB4 218 aa12.72□□□□□ -0.37
UBE3B-202ENST00000342494 CBLN4Q9NTU7 201 aa12.72□□□□□ -0.37
UBE3B-202ENST00000342494 C1QL1O75973 258 aa12.72□□□□□ -0.37
UBE3B-202ENST00000342494 VN1R17PQ8TDU5 208 aa12.72□□□□□ -0.37
UBE3B-202ENST00000342494 MRPL32Q9BYC8 188 aaKnown RBP12.72□□□□□ -0.37
UBE3B-202ENST00000342494 ZIC4Q8N9L1 334 aa12.72□□□□□ -0.37
UBE3B-202ENST00000342494 C12orf77C9JDV5 145 aa12.72□□□□□ -0.37
UBE3B-202ENST00000342494 NPFFO15130 113 aa12.72□□□□□ -0.37
UBE3B-202ENST00000342494 CD300CQ08708 224 aa12.72□□□□□ -0.37
UBE3B-202ENST00000342494 NRN1LQ496H8 165 aa12.72□□□□□ -0.37
UBE3B-202ENST00000342494 CLDND2Q8NHS1 167 aa12.72□□□□□ -0.37
UBE3B-202ENST00000342494 RTTNQ86VV8 2226 aa12.71□□□□□ -0.37
UBE3B-202ENST00000342494 CD69Q07108 199 aa12.71□□□□□ -0.37
UBE3B-202ENST00000342494 PSG7Q13046 419 aa12.71□□□□□ -0.37
UBE3B-202ENST00000342494 POC1AQ8NBT0 407 aa12.71□□□□□ -0.37
UBE3B-202ENST00000342494 KIR2DL4Q99706 377 aa12.71□□□□□ -0.37
UBE3B-202ENST00000342494 METRNQ9UJH8 293 aa12.71□□□□□ -0.37
UBE3B-202ENST00000342494 TMEM14DPA8MWL7 114 aa12.71□□□□□ -0.37
UBE3B-202ENST00000342494 H7C2G1 150 aa12.71□□□□□ -0.37
UBE3B-202ENST00000342494 AMY1AP04745 511 aa12.71□□□□□ -0.37
UBE3B-202ENST00000342494 COX6CP09669 75 aa12.71□□□□□ -0.37
UBE3B-202ENST00000342494 TAS2R60P59551 318 aa12.71□□□□□ -0.37
UBE3B-202ENST00000342494 MEF2CQ06413 473 aaPredicted RBP12.71□□□□□ -0.37
UBE3B-202ENST00000342494 ZXDCQ2QGD7 858 aaPredicted RBP12.71□□□□□ -0.37
UBE3B-202ENST00000342494 MBNL2Q5VZF2 373 aaKnown RBP12.71□□□□□ -0.37
UBE3B-202ENST00000342494 ARPC1AQ92747 370 aa12.71□□□□□ -0.37
UBE3B-202ENST00000342494 ELF5Q9UKW6 265 aaPredicted RBP12.71□□□□□ -0.37
UBE3B-202ENST00000342494 MYO16Q9Y6X6 1858 aa12.71□□□□□ -0.37
UBE3B-202ENST00000342494 CRYBB3P26998 211 aa12.71□□□□□ -0.37
UBE3B-202ENST00000342494 MIA3Q5JRA6 1907 aa12.71□□□□□ -0.37
UBE3B-202ENST00000342494 CA2P00918 260 aa12.71□□□□□ -0.38
UBE3B-202ENST00000342494 MEIG1Q5JSS6 88 aa12.71□□□□□ -0.38
UBE3B-202ENST00000342494 ASPHD2Q6ICH7 369 aa12.71□□□□□ -0.38
UBE3B-202ENST00000342494 SMIM8Q96KF7 97 aa12.71□□□□□ -0.38
UBE3B-202ENST00000342494 GEMIN7Q9H840 131 aaKnown RBP12.71□□□□□ -0.38
UBE3B-202ENST00000342494 DIRC3C9JPN6 131 aa12.71□□□□□ -0.38
UBE3B-202ENST00000342494 HTN3P15516 51 aa12.71□□□□□ -0.38
UBE3B-202ENST00000342494 GPR183P32249 361 aa12.71□□□□□ -0.38
UBE3B-202ENST00000342494 SPSB4Q96A44 273 aa12.71□□□□□ -0.38
UBE3B-202ENST00000342494 CACNA1EQ15878 2313 aa12.71□□□□□ -0.38
UBE3B-202ENST00000342494 KBTBD11-OT1A0A1B0GTJ5 212 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-202ENST00000342494 PRSS2P07478 247 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 UCP3P55916 312 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 SMUG1Q53HV7 270 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 LINC00305Q7Z4B0 112 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 GATAD1Q8WUU5 269 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 NEU1Q99519 415 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 C5orf66Q9H5L9 145 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 MRPS18CQ9Y3D5 142 aaKnown RBP12.7□□□□□ -0.38
UBE3B-202ENST00000342494 PPP1R17O96001 155 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 RNASE1P07998 156 aaKnown RBP12.7□□□□□ -0.38
UBE3B-202ENST00000342494 KLK15Q9H2R5 256 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 C21orf62Q9NYP8 219 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 PEMTQ9UBM1 199 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 E9PLN8 166 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 CIRBPQ14011 172 aaKnown RBP12.7□□□□□ -0.38
UBE3B-202ENST00000342494 TCF24Q7RTU0 167 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 VKORC1Q9BQB6 163 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 FOXA2Q9Y261 457 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-202ENST00000342494 PAM16Q9Y3D7 125 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 TMEM238LA0A1B0GVL6 79 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 A6NJY4 79 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 HLA-DQA1P01909 254 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 UQCRFS1P47985 274 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 SAPCD1Q5SSQ6 148 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 SIGIRRQ6IA17 410 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 PET117Q6UWS5 81 aa12.7□□□□□ -0.38
UBE3B-202ENST00000342494 TGFBR3LH3BV60 316 aa12.69□□□□□ -0.38
UBE3B-202ENST00000342494 MDKP21741 143 aaPredicted RBP12.69□□□□□ -0.38
UBE3B-202ENST00000342494 RPS11P62280 158 aaKnown RBP eCLIP12.69□□□□□ -0.38
UBE3B-202ENST00000342494 DLEC1Q9Y238 1755 aa12.69□□□□□ -0.38
UBE3B-202ENST00000342494 TRAV20A0A0B4J274 112 aa12.69□□□□□ -0.38
UBE3B-202ENST00000342494 HSPB1P04792 205 aaKnown RBP12.69□□□□□ -0.38
UBE3B-202ENST00000342494 CELA3BP08861 270 aa12.69□□□□□ -0.38
UBE3B-202ENST00000342494 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.69□□□□□ -0.38
UBE3B-202ENST00000342494 OR13A1Q8NGR1 328 aa12.69□□□□□ -0.38
UBE3B-202ENST00000342494 IGHV3-11P01762 117 aa12.69□□□□□ -0.38
UBE3B-202ENST00000342494 LGALS3P17931 250 aaKnown RBP12.69□□□□□ -0.38
UBE3B-202ENST00000342494 VDAC2P45880 294 aaPredicted RBP12.69□□□□□ -0.38
UBE3B-202ENST00000342494 SPTBN2O15020 2390 aa12.69□□□□□ -0.38
UBE3B-202ENST00000342494 PSMB11A5LHX3 300 aa12.69□□□□□ -0.38
UBE3B-202ENST00000342494 CLEC19AQ6UXS0 136 aa12.69□□□□□ -0.38
UBE3B-202ENST00000342494 COLCA1Q6ZS62 124 aa12.69□□□□□ -0.38
UBE3B-202ENST00000342494 CYP2G1PQ6ZSU1 146 aa12.69□□□□□ -0.38
UBE3B-202ENST00000342494 DUX3Q96PT4 197 aa12.69□□□□□ -0.38
UBE3B-202ENST00000342494 INTS1Q8N201 2190 aaKnown RBP12.69□□□□□ -0.38
UBE3B-202ENST00000342494 PRSS22Q9GZN4 317 aa12.69□□□□□ -0.38
UBE3B-202ENST00000342494 LINC00312Q9Y6C7 94 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms