RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 ACP7Q6ZNF0 438 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 ANAPC16Q96DE5 110 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 DDA1Q9BW61 102 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 MS4A5Q9H3V2 200 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 GP6Q9HCN6 339 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 ANKRD11Q6UB99 2663 aaPredicted RBP11.99□□□□□ -0.49
CPSF7-201ENST00000340437 UTF1Q5T230 341 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 LINC01551Q86U37 167 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 TMEM170AQ8WVE7 144 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 MS4A10Q96PG2 267 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 FKBP11Q9NYL4 201 aa11.99□□□□□ -0.49
CPSF7-201ENST00000340437 NPIPB11E5RHQ5 1161 aa11.98□□□□□ -0.49
CPSF7-201ENST00000340437 SLC31A2O15432 143 aa11.98□□□□□ -0.49
CPSF7-201ENST00000340437 RBFOX2O43251 390 aaKnown RBP eCLIP11.98□□□□□ -0.494e-7■□□□□ 10.3
CPSF7-201ENST00000340437 WDR82Q6UXN9 313 aa11.98□□□□□ -0.49
CPSF7-201ENST00000340437 PXMP4Q9Y6I8 212 aa11.98□□□□□ -0.49
CPSF7-201ENST00000340437 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.98□□□□□ -0.496e-8■■■■□ 22.6
CPSF7-201ENST00000340437 YLPM1P49750 1951 aaKnown RBP11.98□□□□□ -0.49
CPSF7-201ENST00000340437 PMS2P5A8MQ11 134 aa11.98□□□□□ -0.49
CPSF7-201ENST00000340437 EREGO14944 169 aa11.98□□□□□ -0.49
CPSF7-201ENST00000340437 RAB29O14966 203 aa11.98□□□□□ -0.49
CPSF7-201ENST00000340437 GNG10P50151 68 aa11.98□□□□□ -0.49
CPSF7-201ENST00000340437 TIMM9Q9Y5J7 89 aa11.98□□□□□ -0.49
CPSF7-201ENST00000340437 TCL1AP56279 114 aa11.98□□□□□ -0.49
CPSF7-201ENST00000340437 OR5I1Q13606 314 aa11.98□□□□□ -0.49
CPSF7-201ENST00000340437 FOXH1O75593 365 aa11.97□□□□□ -0.49
CPSF7-201ENST00000340437 PRDX2P32119 198 aa11.97□□□□□ -0.49
CPSF7-201ENST00000340437 SPRY3O43610 288 aa11.97□□□□□ -0.49
CPSF7-201ENST00000340437 GATA2P23769 480 aaPredicted RBP11.97□□□□□ -0.49
CPSF7-201ENST00000340437 CD177Q8N6Q3 437 aa11.97□□□□□ -0.49
CPSF7-201ENST00000340437 OR4P4Q8NGL7 312 aa11.97□□□□□ -0.49
CPSF7-201ENST00000340437 FER1L6-AS2Q96M78 137 aa11.97□□□□□ -0.49
CPSF7-201ENST00000340437 GUCD1Q96NT3 240 aa11.97□□□□□ -0.49
CPSF7-201ENST00000340437 ZPBPQ9BS86 351 aa11.97□□□□□ -0.49
CPSF7-201ENST00000340437 CXXC4Q9H2H0 198 aa11.97□□□□□ -0.49
CPSF7-201ENST00000340437 TNRC18O15417 2968 aaPredicted RBP11.97□□□□□ -0.49
CPSF7-201ENST00000340437 TNRC6AQ8NDV7 1962 aaKnown RBP11.97□□□□□ -0.49
CPSF7-201ENST00000340437 HCFC1P51610 2035 aa11.97□□□□□ -0.49
CPSF7-201ENST00000340437 A8MWP6 167 aa11.97□□□□□ -0.49
CPSF7-201ENST00000340437 FRMD6-AS1P0C7T7 363 aa11.97□□□□□ -0.49
CPSF7-201ENST00000340437 SMIM21Q3B7S5 101 aa11.97□□□□□ -0.49
CPSF7-201ENST00000340437 PRR31Q5SQ13 230 aa11.97□□□□□ -0.49
CPSF7-201ENST00000340437 TOMM20LQ6UXN7 152 aa11.97□□□□□ -0.49
CPSF7-201ENST00000340437 C11orf53Q8IXP5 236 aa11.97□□□□□ -0.49
CPSF7-201ENST00000340437 OCC1Q8TAD7 63 aa11.97□□□□□ -0.49
CPSF7-201ENST00000340437 S1PR3Q99500 378 aa11.97□□□□□ -0.49
CPSF7-201ENST00000340437 KIAA1644Q3SXP7 199 aa11.96□□□□□ -0.49
CPSF7-201ENST00000340437 TEX38Q6PEX7 206 aa11.96□□□□□ -0.49
CPSF7-201ENST00000340437 BAGE3Q86Y29 109 aa11.96□□□□□ -0.49
CPSF7-201ENST00000340437 BAGE2Q86Y30 109 aa11.96□□□□□ -0.49
CPSF7-201ENST00000340437 AGMATQ9BSE5 352 aa11.96□□□□□ -0.49
CPSF7-201ENST00000340437 CREBBPQ92793 2442 aa11.96□□□□□ -0.49
CPSF7-201ENST00000340437 TCAPO15273 167 aa11.96□□□□□ -0.5
CPSF7-201ENST00000340437 ADMP35318 185 aa11.96□□□□□ -0.5
CPSF7-201ENST00000340437 ZNF83P51522 516 aa11.96□□□□□ -0.5
CPSF7-201ENST00000340437 ACTL10Q5JWF8 245 aa11.96□□□□□ -0.5
CPSF7-201ENST00000340437 SLC35E4Q6ICL7 350 aa11.96□□□□□ -0.5
CPSF7-201ENST00000340437 OR5R1Q8NH85 324 aa11.96□□□□□ -0.5
CPSF7-201ENST00000340437 SFRP2Q96HF1 295 aa11.96□□□□□ -0.5
CPSF7-201ENST00000340437 TBX15Q96SF7 602 aa11.96□□□□□ -0.5
CPSF7-201ENST00000340437 SEPSECSQ9HD40 501 aaKnown RBP11.96□□□□□ -0.5
CPSF7-201ENST00000340437 SERTAD4Q9NUC0 356 aa11.96□□□□□ -0.5
CPSF7-201ENST00000340437 RYDENQ9NUL5 291 aaKnown RBP11.96□□□□□ -0.5
CPSF7-201ENST00000340437 IER3P46695 156 aa11.96□□□□□ -0.5
CPSF7-201ENST00000340437 TREML4Q6UXN2 200 aa11.96□□□□□ -0.5
CPSF7-201ENST00000340437 LRFN3Q9BTN0 628 aa11.96□□□□□ -0.5
CPSF7-201ENST00000340437 OPN3Q9H1Y3 402 aaPredicted RBP11.96□□□□□ -0.5
CPSF7-201ENST00000340437 ENY2Q9NPA8 101 aa11.96□□□□□ -0.5
CPSF7-201ENST00000340437 IQCF6A8MYZ5 107 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 CECR9P0C854 216 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 GABRA6Q16445 453 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 HLA-DRB5Q30154 266 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 TGIF2LYQ8IUE0 185 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 CISD2Q8N5K1 135 aaKnown RBP11.95□□□□□ -0.5
CPSF7-201ENST00000340437 ZBTB34Q8NCN2 500 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 OR10G8Q8NGN5 311 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 FAM216AQ8WUB2 273 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 SAMD10Q9BYL1 202 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 TRBV20OR9-2A0A075B6H5 130 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 CASP6P55212 293 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 ZNF718Q3SXZ3 478 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 SPRNQ5BIV9 151 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 MOB3BQ86TA1 216 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 HSD17B10Q99714 261 aaKnown RBP11.95□□□□□ -0.5
CPSF7-201ENST00000340437 TP53TG5Q9Y2B4 290 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 TAS2R60P59551 318 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 ERVFC1-1P60608 527 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 FXYD3Q14802 87 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 IQCJQ1A5X6 159 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 FAM214BQ7L5A3 538 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 MOGAT3Q86VF5 341 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 LYG1Q8N1E2 194 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 ACY3Q96HD9 319 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 GMPPAQ96IJ6 420 aaPredicted RBP11.95□□□□□ -0.5
CPSF7-201ENST00000340437 MGST2Q99735 147 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 PAM16Q9Y3D7 125 aa11.95□□□□□ -0.5
CPSF7-201ENST00000340437 PROP1O75360 226 aa11.94□□□□□ -0.5
CPSF7-201ENST00000340437 OR10J4P0C629 311 aa11.94□□□□□ -0.5
CPSF7-201ENST00000340437 DUTP33316 252 aaKnown RBP11.94□□□□□ -0.5
CPSF7-201ENST00000340437 SRP14P37108 136 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms