RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 CREBL2O60519 120 aaPredicted RBP11.9□□□□□ -0.5
UBE3B-201ENST00000340074 PI3P19957 117 aa11.9□□□□□ -0.5
UBE3B-201ENST00000340074 ETV6P41212 452 aa11.9□□□□□ -0.5
UBE3B-201ENST00000340074 TAS2R31P59538 309 aa11.9□□□□□ -0.5
UBE3B-201ENST00000340074 SPANXN2Q5MJ10 180 aa11.9□□□□□ -0.5
UBE3B-201ENST00000340074 C8orf86Q6ZUL3 223 aa11.9□□□□□ -0.5
UBE3B-201ENST00000340074 Q8N402 240 aa11.9□□□□□ -0.5
UBE3B-201ENST00000340074 MRGPRFQ96AM1 343 aa11.9□□□□□ -0.5
UBE3B-201ENST00000340074 AIFM2Q9BRQ8 373 aa11.9□□□□□ -0.5
UBE3B-201ENST00000340074 MSGN1A6NI15 193 aa11.89□□□□□ -0.51
UBE3B-201ENST00000340074 DISC1C4P0D8 188 aa11.89□□□□□ -0.51
UBE3B-201ENST00000340074 ACTL6BO94805 426 aa11.89□□□□□ -0.51
UBE3B-201ENST00000340074 APELAP0DMC3 54 aa11.89□□□□□ -0.51
UBE3B-201ENST00000340074 NQO2P16083 231 aa11.89□□□□□ -0.51
UBE3B-201ENST00000340074 PTBP1P26599 531 aaKnown RBP eCLIP11.89□□□□□ -0.51
UBE3B-201ENST00000340074 LPAR6P43657 344 aa11.89□□□□□ -0.51
UBE3B-201ENST00000340074 RAB9AP51151 201 aa11.89□□□□□ -0.51
UBE3B-201ENST00000340074 ZNF585BQ52M93 769 aa11.89□□□□□ -0.51
UBE3B-201ENST00000340074 C10orf55Q5SWW7 151 aa11.89□□□□□ -0.51
UBE3B-201ENST00000340074 ASPHD1Q5U4P2 390 aa11.89□□□□□ -0.51
UBE3B-201ENST00000340074 OR4A47Q6IF82 309 aa11.89□□□□□ -0.51
UBE3B-201ENST00000340074 ZNF695Q8IW36 515 aa11.89□□□□□ -0.51
UBE3B-201ENST00000340074 OR5M8Q8NGP6 311 aa11.89□□□□□ -0.51
UBE3B-201ENST00000340074 OR13C8Q8NGS7 320 aa11.89□□□□□ -0.51
UBE3B-201ENST00000340074 TMEM167AQ8TBQ9 72 aa11.89□□□□□ -0.51
UBE3B-201ENST00000340074 MARCH1Q8TCQ1 289 aa11.89□□□□□ -0.51
UBE3B-201ENST00000340074 MYOZ3Q8TDC0 251 aa11.89□□□□□ -0.51
UBE3B-201ENST00000340074 SRSF12Q8WXF0 261 aaKnown RBP11.89□□□□□ -0.51
UBE3B-201ENST00000340074 TRIM63Q969Q1 353 aa11.89□□□□□ -0.51
UBE3B-201ENST00000340074 ZNF486Q96H40 463 aaPredicted RBP11.89□□□□□ -0.51
UBE3B-201ENST00000340074 PHB2Q99623 299 aa11.89□□□□□ -0.51
UBE3B-201ENST00000340074 PF4P02776 101 aa11.88□□□□□ -0.51
UBE3B-201ENST00000340074 RPA2P15927 270 aa11.88□□□□□ -0.51
UBE3B-201ENST00000340074 CDX1P47902 265 aaPredicted RBP11.88□□□□□ -0.51
UBE3B-201ENST00000340074 PIGPP57054 158 aa11.88□□□□□ -0.51
UBE3B-201ENST00000340074 KIAA0141Q14154 515 aaPredicted RBP11.88□□□□□ -0.51
UBE3B-201ENST00000340074 POU2AF1Q16633 256 aa11.88□□□□□ -0.51
UBE3B-201ENST00000340074 DMBX1Q8NFW5 382 aa11.88□□□□□ -0.51
UBE3B-201ENST00000340074 OR5T1Q8NG75 326 aa11.88□□□□□ -0.51
UBE3B-201ENST00000340074 OR51S1Q8NGJ8 323 aa11.88□□□□□ -0.51
UBE3B-201ENST00000340074 ZFAND1Q8TCF1 268 aa11.88□□□□□ -0.51
UBE3B-201ENST00000340074 HRASLSQ9HDD0 168 aa11.88□□□□□ -0.51
UBE3B-201ENST00000340074 BET1LQ9NYM9 111 aa11.88□□□□□ -0.51
UBE3B-201ENST00000340074 COMMD9Q9P000 198 aa11.88□□□□□ -0.51
UBE3B-201ENST00000340074 MPPED1O15442 326 aa11.87□□□□□ -0.51
UBE3B-201ENST00000340074 SLC6A1P30531 599 aa11.87□□□□□ -0.51
UBE3B-201ENST00000340074 RND3P61587 244 aa11.87□□□□□ -0.51
UBE3B-201ENST00000340074 ZNF491Q8N8L2 437 aa11.87□□□□□ -0.51
UBE3B-201ENST00000340074 OR4A5Q8NH83 315 aa11.87□□□□□ -0.51
UBE3B-201ENST00000340074 TMEM68Q96MH6 324 aa11.87□□□□□ -0.51
UBE3B-201ENST00000340074 MS4A10Q96PG2 267 aa11.87□□□□□ -0.51
UBE3B-201ENST00000340074 PRRT1Q99946 306 aa11.87□□□□□ -0.51
UBE3B-201ENST00000340074 SRRQ9GZT4 340 aa11.87□□□□□ -0.51
UBE3B-201ENST00000340074 GNB4Q9HAV0 340 aa11.87□□□□□ -0.51
UBE3B-201ENST00000340074 TMEM140Q9NV12 185 aa11.87□□□□□ -0.51
UBE3B-201ENST00000340074 TRAV3A0A0B4J244 114 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 A6NHS1 94 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 MARCH11A6NNE9 402 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 E7EUB6 86 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 KRASP01116 189 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 IL6RP08887 468 aaPredicted RBP11.86□□□□□ -0.51
UBE3B-201ENST00000340074 MYOD1P15172 320 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 CD40LGP29965 261 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 MAS1LP35410 378 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 G6PCP35575 357 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 ECI1P42126 302 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 ERVK-16P61578 105 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 RPL8P62917 257 aaKnown RBP11.86□□□□□ -0.51
UBE3B-201ENST00000340074 KLF9Q13886 244 aaPredicted RBP11.86□□□□□ -0.51
UBE3B-201ENST00000340074 DEFB136Q30KP8 78 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 ETV3LQ6ZN32 361 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 C4orf3Q8WVX3 66 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 UBE2E2Q96LR5 201 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 DUX3Q96PT4 197 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 SPIN2AQ99865 258 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 SPIN2BQ9BPZ2 258 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 ZNF355PQ9NSJ1 428 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 FAM212BQ9NTI7 297 aaPredicted RBP11.86□□□□□ -0.51
UBE3B-201ENST00000340074 MCUBQ9NWR8 336 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 SLC2A8Q9NY64 477 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 COPZ2Q9P299 210 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 UPK2O00526 184 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 CTSDP07339 412 aaPredicted RBP11.86□□□□□ -0.51
UBE3B-201ENST00000340074 HLA-GP17693 338 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 TPPP2P59282 170 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 TOMM5Q8N4H5 51 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 RAX2Q96IS3 184 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 OR5B12Q96R08 314 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 RTBDNQ9BSG5 229 aaPredicted RBP11.86□□□□□ -0.51
UBE3B-201ENST00000340074 SCP2D1Q9UJQ7 156 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 VSIG4Q9Y279 399 aa11.86□□□□□ -0.51
UBE3B-201ENST00000340074 HMX3A6NHT5 357 aa11.85□□□□□ -0.51
UBE3B-201ENST00000340074 H0Y980 276 aa11.85□□□□□ -0.51
UBE3B-201ENST00000340074 CCL24O00175 119 aa11.85□□□□□ -0.51
UBE3B-201ENST00000340074 IGKV1-39P01597 117 aa11.85□□□□□ -0.51
UBE3B-201ENST00000340074 TRGV3P03979 118 aa11.85□□□□□ -0.51
UBE3B-201ENST00000340074 IGKV1D-39P04432 117 aa11.85□□□□□ -0.51
UBE3B-201ENST00000340074 CD33P20138 364 aa11.85□□□□□ -0.51
UBE3B-201ENST00000340074 RPL27AP46776 148 aaKnown RBP11.85□□□□□ -0.51
UBE3B-201ENST00000340074 AP3S2P59780 193 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms