RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 MALSU1Q96EH3 234 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 TXNDC17Q9BRA2 123 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 MEGF9Q9H1U4 602 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 ELL3Q9HB65 397 aaPredicted RBP4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 TMEM242Q9NWH2 141 aa4.33□□□□□ -1.72
PRPF4B-201ENST00000337659 FXYD6-FXYD2A0A087WZ82 144 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 BUB1B-PAK6H3BSN5 160 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 CLDN1O95832 211 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 FBP1P09467 338 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 ZNF726P1Q15940 193 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 DMRTC1Q5HYR2 192 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 FAM216BQ8N7L0 139 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 ZNRF1Q8ND25 227 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 NINJ1Q92982 152 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 MARC2Q969Z3 335 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 PINX1Q96BK5 328 aaKnown RBP4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 TECRQ9NZ01 308 aaKnown RBP4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 PRR13Q9NZ81 148 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 KIAA1456Q9P272 454 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 A0A1W2PPH5 198 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 HSD17B6O14756 317 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 PLAUP00749 431 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 CAMLGP49069 296 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 LY6DQ14210 128 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 COX8CQ7Z4L0 72 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 SECTM1Q8WVN6 248 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 C11orf52Q96A22 123 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 SLC35E1Q96K37 410 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 UQCC1Q9NVA1 299 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 CISD1Q9NZ45 108 aaKnown RBP4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 COQ3Q9NZJ6 369 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 PRELID1Q9Y255 219 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 AMMECR1Q9Y4X0 333 aaPredicted RBP4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 SETXQ7Z333 2677 aaKnown RBP4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 IGHV2-26A0A0B4J1V2 119 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 EEF1E1-BLOC1S5C9J1V9 151 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 TEX22C9J3V5 150 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 SPRY3O43610 288 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 CHST1O43916 411 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 HSPB1P04792 205 aaKnown RBP4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 PVALBP20472 110 aaPredicted RBP4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 RPL29P47914 159 aaKnown RBP4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 DVL1P1P54792 670 aaPredicted RBP4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 OR2B8PP59922 312 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 LRRC10Q5BKY1 277 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 TOMM40LQ969M1 308 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 R3HDM4Q96D70 268 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 TMEM147Q9BVK8 224 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 CHIAQ9BZP6 476 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 LY96Q9Y6Y9 160 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 NBPF19A0A087WUL8 3843 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 LAMA5O15230 3695 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 IGHV2-70DA0A0C4DH43 119 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 TMEM218A2RU14 115 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 PLATP00750 562 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 GYPAP02724 150 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 SOD3P08294 240 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 USF1P22415 310 aaPredicted RBP4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 NUP62P37198 522 aaPredicted RBP4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 CDKN1AP38936 164 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 RAB13P51153 203 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 HSPE1P61604 102 aaKnown RBP4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 SP6Q3SY56 376 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 PRSS57Q6UWY2 283 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 KRTAP1-3Q8IUG1 177 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 RBMXL1Q96E39 390 aaKnown RBP4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 RAB1BQ9H0U4 201 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 OR14J1Q9UGF5 321 aa4.32□□□□□ -1.72
PRPF4B-201ENST00000337659 SMG1Q96Q15 3661 aaKnown RBP4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 C5orf51A6NDU8 294 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 NPIPB5A8MRT5 1133 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 C19orf84I3L1E1 186 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 COL8A2P25067 703 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 IL2RGP31785 369 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 RPL23AP62750 156 aaKnown RBP4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 TMEM41BQ5BJD5 291 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 OR4A47Q6IF82 309 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 CCDC28AQ8IWP9 274 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 ABHD5Q8WTS1 349 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 CASTOR1Q8WTX7 329 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 CACNG5Q9UF02 275 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 YLPM1P49750 1951 aaKnown RBP4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 BORCS7-ASMTA0A0B4J1R7 106 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 NDUFB3O43676 98 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 HRASP01112 189 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 MBP02144 154 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 HOXB5P09067 269 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 OR8U9P0C7N5 309 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 RNASE2P10153 161 aaKnown RBP4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 IRF2P14316 349 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 MYCNOSP40205 109 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 LDLRAD2Q5SZI1 272 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 WFDC8Q8IUA0 241 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 OR5T2Q8NGG2 359 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 OR10G7Q8NGN6 311 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 OR1S2Q8NGQ3 325 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 OR8U1Q8NH10 309 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 CLDND2Q8NHS1 167 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 VSTM2AQ8TAG5 236 aa4.31□□□□□ -1.72
PRPF4B-201ENST00000337659 OR2S2Q9NQN1 319 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms