RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 RAB24Q969Q5 203 aa17.6■□□□□ 0.41
LIMS2-201ENST00000324938 RHOVQ96L33 236 aa17.6■□□□□ 0.41
LIMS2-201ENST00000324938 TMPRSS5Q9H3S3 457 aa17.6■□□□□ 0.41
LIMS2-201ENST00000324938 SH3BGRL2Q9UJC5 107 aa17.6■□□□□ 0.41
LIMS2-201ENST00000324938 RPUSD1Q9UJJ7 312 aaKnown RBP17.6■□□□□ 0.41
LIMS2-201ENST00000324938 RRHO14718 337 aa17.6■□□□□ 0.41
LIMS2-201ENST00000324938 MPDU1O75352 247 aa17.6■□□□□ 0.41
LIMS2-201ENST00000324938 PSMB3P49720 205 aa17.6■□□□□ 0.41
LIMS2-201ENST00000324938 TMPRSS3P57727 454 aa17.6■□□□□ 0.41
LIMS2-201ENST00000324938 TBR1Q16650 682 aa17.6■□□□□ 0.41
LIMS2-201ENST00000324938 WDR25Q64LD2 544 aaPredicted RBP17.6■□□□□ 0.41
LIMS2-201ENST00000324938 Q8WTZ3 238 aa17.6■□□□□ 0.41
LIMS2-201ENST00000324938 FOXA2Q9Y261 457 aaPredicted RBP17.6■□□□□ 0.41
LIMS2-201ENST00000324938 LINC00312Q9Y6C7 94 aa17.6■□□□□ 0.41
LIMS2-201ENST00000324938 MAP1BP46821 2468 aaKnown RBP17.6■□□□□ 0.41
LIMS2-201ENST00000324938 hADV38S2A0JD32 116 aa17.59■□□□□ 0.41
LIMS2-201ENST00000324938 UBE2CO00762 179 aa17.59■□□□□ 0.41
LIMS2-201ENST00000324938 CYB5BO43169 146 aa17.59■□□□□ 0.41
LIMS2-201ENST00000324938 MMP23AO75900 390 aa17.59■□□□□ 0.41
LIMS2-201ENST00000324938 GNG10P50151 68 aa17.59■□□□□ 0.41
LIMS2-201ENST00000324938 POU2AF1Q16633 256 aa17.59■□□□□ 0.41
LIMS2-201ENST00000324938 OR4A47Q6IF82 309 aa17.59■□□□□ 0.41
LIMS2-201ENST00000324938 ZNF343Q6P1L6 599 aa17.59■□□□□ 0.41
LIMS2-201ENST00000324938 SLC25A48Q6ZT89 311 aaKnown RBP17.59■□□□□ 0.41
LIMS2-201ENST00000324938 ATMQ13315 3056 aa17.59■□□□□ 0.41
LIMS2-201ENST00000324938 FOXC1Q12948 553 aa17.59■□□□□ 0.41
LIMS2-201ENST00000324938 TMEM170AQ8WVE7 144 aa17.59■□□□□ 0.41
LIMS2-201ENST00000324938 SNRNP40Q96DI7 357 aaKnown RBP17.59■□□□□ 0.41
LIMS2-201ENST00000324938 TMEM14BQ9NUH8 114 aa17.59■□□□□ 0.41
LIMS2-201ENST00000324938 TMEM242Q9NWH2 141 aa17.59■□□□□ 0.41
LIMS2-201ENST00000324938 ZNF98A6NK75 572 aa17.58■□□□□ 0.4
LIMS2-201ENST00000324938 SEC14L6B5MCN3 397 aa17.58■□□□□ 0.4
LIMS2-201ENST00000324938 TMEM250H0YL14 139 aa17.58■□□□□ 0.4
LIMS2-201ENST00000324938 TMPRSS2O15393 492 aa17.58■□□□□ 0.4
LIMS2-201ENST00000324938 CDC34P49427 236 aaPredicted RBP17.58■□□□□ 0.4
LIMS2-201ENST00000324938 ERVFRD-1P60508 538 aa17.58■□□□□ 0.4
LIMS2-201ENST00000324938 ZCCHC14Q8WYQ9 949 aaKnown RBP17.58■□□□□ 0.4
LIMS2-201ENST00000324938 TRAV38-1A0A0B4J264 116 aa17.57■□□□□ 0.4
LIMS2-201ENST00000324938 TREML4Q6UXN2 200 aa17.57■□□□□ 0.4
LIMS2-201ENST00000324938 IGHV2-5P01817 119 aa17.57■□□□□ 0.4
LIMS2-201ENST00000324938 CXCL1P09341 107 aa17.57■□□□□ 0.4
LIMS2-201ENST00000324938 NDUFB7P17568 137 aa17.57■□□□□ 0.4
LIMS2-201ENST00000324938 ABHD12Q8N2K0 398 aa17.57■□□□□ 0.4
LIMS2-201ENST00000324938 OR10A7Q8NGE5 316 aa17.57■□□□□ 0.4
LIMS2-201ENST00000324938 METTL1Q9UBP6 276 aaKnown RBP17.57■□□□□ 0.4
LIMS2-201ENST00000324938 PCNX1Q96RV3 2341 aa17.56■□□□□ 0.4
LIMS2-201ENST00000324938 SMCO3A2RU48 225 aa17.56■□□□□ 0.4
LIMS2-201ENST00000324938 K7ENP7 123 aa17.56■□□□□ 0.4
LIMS2-201ENST00000324938 HRASP01112 189 aa17.56■□□□□ 0.4
LIMS2-201ENST00000324938 RPS10P46783 165 aaKnown RBP17.56■□□□□ 0.4
LIMS2-201ENST00000324938 HSPE1P61604 102 aaKnown RBP17.56■□□□□ 0.4
LIMS2-201ENST00000324938 MEF2CQ06413 473 aaPredicted RBP17.56■□□□□ 0.4
LIMS2-201ENST00000324938 CYP2G1PQ6ZSU1 146 aa17.56■□□□□ 0.4
LIMS2-201ENST00000324938 RAB1CQ92928 201 aa17.56■□□□□ 0.4
LIMS2-201ENST00000324938 SMIM7Q9BQ49 75 aa17.56■□□□□ 0.4
LIMS2-201ENST00000324938 SLC25A10Q9UBX3 287 aaPredicted RBP17.56■□□□□ 0.4
LIMS2-201ENST00000324938 NAT8Q9UHE5 227 aa17.56■□□□□ 0.4
LIMS2-201ENST00000324938 KBTBD11O94819 623 aa17.56■□□□□ 0.4
LIMS2-201ENST00000324938 OPRK1P41145 380 aa17.56■□□□□ 0.4
LIMS2-201ENST00000324938 RND2P52198 227 aa17.56■□□□□ 0.4
LIMS2-201ENST00000324938 PRR30Q53SZ7 412 aaPredicted RBP17.56■□□□□ 0.4
LIMS2-201ENST00000324938 ZCCHC24Q8N2G6 241 aaKnown RBP17.56■□□□□ 0.4
LIMS2-201ENST00000324938 GAL3ST2Q9H3Q3 398 aa17.56■□□□□ 0.4
LIMS2-201ENST00000324938 SAP30LQ9HAJ7 183 aa17.56■□□□□ 0.4
LIMS2-201ENST00000324938 URGCP-MRPS24S4R325 110 aa17.56■□□□□ 0.4
LIMS2-201ENST00000324938 DEFA4P12838 97 aa17.55■□□□□ 0.4
LIMS2-201ENST00000324938 TMEM249Q2WGJ8 235 aa17.55■□□□□ 0.4
LIMS2-201ENST00000324938 C1orf87Q8N0U7 546 aa17.55■□□□□ 0.4
LIMS2-201ENST00000324938 GATAD1Q8WUU5 269 aa17.55■□□□□ 0.4
LIMS2-201ENST00000324938 C12orf57Q99622 126 aa17.55■□□□□ 0.4
LIMS2-201ENST00000324938 MS4A5Q9H3V2 200 aa17.55■□□□□ 0.4
LIMS2-201ENST00000324938 CT45A6P0DMU7 189 aa17.54■□□□□ 0.4
LIMS2-201ENST00000324938 CT45A5P0DMU8 189 aa17.54■□□□□ 0.4
LIMS2-201ENST00000324938 CT45A7P0DMV0 189 aa17.54■□□□□ 0.4
LIMS2-201ENST00000324938 MGST2Q99735 147 aa17.54■□□□□ 0.4
LIMS2-201ENST00000324938 TMEM178BH3BS89 294 aa17.54■□□□□ 0.4
LIMS2-201ENST00000324938 CLDN34H7C241 214 aa17.54■□□□□ 0.4
LIMS2-201ENST00000324938 IL6RP08887 468 aaPredicted RBP17.54■□□□□ 0.4
LIMS2-201ENST00000324938 SLC24A4Q8NFF2 622 aa17.54■□□□□ 0.4
LIMS2-201ENST00000324938 GGTLC1Q9BX51 225 aa17.54■□□□□ 0.4
LIMS2-201ENST00000324938 PPIAL4EA0A075B759 164 aa17.53■□□□□ 0.4
LIMS2-201ENST00000324938 TGIF2-C20orf24A0A0A6YYL0 155 aa17.53■□□□□ 0.4
LIMS2-201ENST00000324938 PPIAL4DF5H284 164 aa17.53■□□□□ 0.4
LIMS2-201ENST00000324938 YIF1AO95070 293 aa17.53■□□□□ 0.4
LIMS2-201ENST00000324938 PPIAL4FP0DN26 164 aa17.53■□□□□ 0.4
LIMS2-201ENST00000324938 NPY1RP25929 384 aa17.53■□□□□ 0.4
LIMS2-201ENST00000324938 RPL31P62899 125 aaKnown RBP17.53■□□□□ 0.4
LIMS2-201ENST00000324938 FABP9Q0Z7S8 132 aa17.53■□□□□ 0.4
LIMS2-201ENST00000324938 RTL8BQ17RB0 113 aa17.53■□□□□ 0.4
LIMS2-201ENST00000324938 GCSAMLQ5JQS6 135 aa17.53■□□□□ 0.4
LIMS2-201ENST00000324938 IQCF2Q8IXL9 164 aa17.53■□□□□ 0.4
LIMS2-201ENST00000324938 OR4F5Q8NH21 305 aa17.53■□□□□ 0.4
LIMS2-201ENST00000324938 OR4F4Q96R69 305 aa17.53■□□□□ 0.4
LIMS2-201ENST00000324938 SCNM1Q9BWG6 230 aa17.53■□□□□ 0.4
LIMS2-201ENST00000324938 CTDSP1Q9GZU7 261 aa17.53■□□□□ 0.4
LIMS2-201ENST00000324938 SLC35D1Q9NTN3 355 aa17.53■□□□□ 0.4
LIMS2-201ENST00000324938 PRNDQ9UKY0 176 aa17.53■□□□□ 0.4
LIMS2-201ENST00000324938 PPIAL4AQ9Y536 164 aa17.53■□□□□ 0.4
LIMS2-201ENST00000324938 SPTBN2O15020 2390 aa17.53■□□□□ 0.4
LIMS2-201ENST00000324938 AP4M1O00189 453 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms