RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 TNFSF4P23510 183 aa11.69□□□□□ -0.54
VRK3-201ENST00000316763 MEOX2P50222 304 aa11.69□□□□□ -0.54
VRK3-201ENST00000316763 SPCS3P61009 180 aa11.69□□□□□ -0.54
VRK3-201ENST00000316763 FFAR4Q5NUL3 377 aa11.69□□□□□ -0.54
VRK3-201ENST00000316763 RPP25LQ8N5L8 163 aaKnown RBP11.69□□□□□ -0.54
VRK3-201ENST00000316763 ZNRF1Q8ND25 227 aa11.69□□□□□ -0.54
VRK3-201ENST00000316763 OR10G9Q8NGN4 311 aa11.69□□□□□ -0.54
VRK3-201ENST00000316763 OR10G7Q8NGN6 311 aa11.69□□□□□ -0.54
VRK3-201ENST00000316763 NEUROG1Q92886 237 aa11.69□□□□□ -0.54
VRK3-201ENST00000316763 DIRC2Q96SL1 478 aa11.69□□□□□ -0.54
VRK3-201ENST00000316763 S1PR3Q99500 378 aa11.69□□□□□ -0.54
VRK3-201ENST00000316763 QTRT1Q9BXR0 403 aaKnown RBP11.69□□□□□ -0.54
VRK3-201ENST00000316763 CALYQ9NYX4 217 aa11.69□□□□□ -0.54
VRK3-201ENST00000316763 RNF7Q9UBF6 113 aa11.69□□□□□ -0.54
VRK3-201ENST00000316763 METTL1Q9UBP6 276 aaKnown RBP11.69□□□□□ -0.54
VRK3-201ENST00000316763 DOPEY2Q9Y3R5 2298 aa11.69□□□□□ -0.54
VRK3-201ENST00000316763 UTP20O75691 2785 aaKnown RBP11.69□□□□□ -0.54
VRK3-201ENST00000316763 GCN1Q92616 2671 aaKnown RBP11.69□□□□□ -0.54
VRK3-201ENST00000316763 PLAUP00749 431 aa11.68□□□□□ -0.54
VRK3-201ENST00000316763 APOBEC3AP31941 199 aaPredicted RBP11.68□□□□□ -0.54
VRK3-201ENST00000316763 RPS10P46783 165 aaKnown RBP11.68□□□□□ -0.54
VRK3-201ENST00000316763 PSMB3P49720 205 aa11.68□□□□□ -0.54
VRK3-201ENST00000316763 LOXL3P58215 753 aa11.68□□□□□ -0.54
VRK3-201ENST00000316763 OR2B8PP59922 312 aa11.68□□□□□ -0.54
VRK3-201ENST00000316763 EFNB3Q15768 340 aa11.68□□□□□ -0.54
VRK3-201ENST00000316763 AARDQ4LEZ3 155 aa11.68□□□□□ -0.54
VRK3-201ENST00000316763 ACSM6Q6P461 480 aa11.68□□□□□ -0.54
VRK3-201ENST00000316763 FAM222BQ8WU58 562 aa11.68□□□□□ -0.54
VRK3-201ENST00000316763 GAB2Q9UQC2 676 aa11.68□□□□□ -0.54
VRK3-201ENST00000316763 SOX15O60248 233 aa11.68□□□□□ -0.54
VRK3-201ENST00000316763 NDUFS6O75380 124 aaKnown RBP11.68□□□□□ -0.54
VRK3-201ENST00000316763 S100A9P06702 114 aaKnown RBP11.68□□□□□ -0.54
VRK3-201ENST00000316763 OR9G9P0C7N8 305 aa11.68□□□□□ -0.54
VRK3-201ENST00000316763 LINC00205P59089 165 aa11.68□□□□□ -0.54
VRK3-201ENST00000316763 TNFAIP6P98066 277 aaPredicted RBP11.68□□□□□ -0.54
VRK3-201ENST00000316763 OR52E5Q8NH55 327 aa11.68□□□□□ -0.54
VRK3-201ENST00000316763 SPOCK3Q9BQ16 436 aa11.68□□□□□ -0.54
VRK3-201ENST00000316763 TCEAL7Q9BRU2 100 aa11.68□□□□□ -0.54
VRK3-201ENST00000316763 NPCDR1Q9BY65 106 aa11.68□□□□□ -0.54
VRK3-201ENST00000316763 MANBALQ9NQG1 85 aa11.68□□□□□ -0.54
VRK3-201ENST00000316763 TMEM242Q9NWH2 141 aa11.68□□□□□ -0.54
VRK3-201ENST00000316763 FASNP49327 2511 aaKnown RBP11.68□□□□□ -0.54
VRK3-201ENST00000316763 PKDREJQ9NTG1 2253 aa11.67□□□□□ -0.54
VRK3-201ENST00000316763 PCP4L1A6NKN8 68 aa11.67□□□□□ -0.54
VRK3-201ENST00000316763 C17orf100A8MU93 164 aa11.67□□□□□ -0.54
VRK3-201ENST00000316763 AP4M1O00189 453 aa11.67□□□□□ -0.54
VRK3-201ENST00000316763 CYB5BO43169 146 aa11.67□□□□□ -0.54
VRK3-201ENST00000316763 EIF3GO75821 320 aaKnown RBP eCLIP11.67□□□□□ -0.54
VRK3-201ENST00000316763 NQO2P16083 231 aa11.67□□□□□ -0.54
VRK3-201ENST00000316763 ELOBQ15370 118 aa11.67□□□□□ -0.54
VRK3-201ENST00000316763 ACOT6Q3I5F7 207 aaPredicted RBP11.67□□□□□ -0.54
VRK3-201ENST00000316763 SPINK9Q5DT21 86 aa11.67□□□□□ -0.54
VRK3-201ENST00000316763 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.67□□□□□ -0.54
VRK3-201ENST00000316763 ZNF251Q9BRH9 671 aa11.67□□□□□ -0.54
VRK3-201ENST00000316763 SDF2L1Q9HCN8 221 aa11.67□□□□□ -0.54
VRK3-201ENST00000316763 GCM1Q9NP62 436 aa11.67□□□□□ -0.54
VRK3-201ENST00000316763 ROS1P08922 2347 aa11.67□□□□□ -0.54
VRK3-201ENST00000316763 TRGV10A0A0A0MS01 117 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 C15orf62A8K5M9 175 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 PROP1O75360 226 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 CYB5R3P00387 301 aaPredicted RBP11.66□□□□□ -0.54
VRK3-201ENST00000316763 IGKV1D-33P01593 117 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 IGKV1-33P01594 117 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 MEF2BQ02080 365 aaPredicted RBP11.66□□□□□ -0.54
VRK3-201ENST00000316763 FABP9Q0Z7S8 132 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 ZNF672Q499Z4 452 aaPredicted RBP11.66□□□□□ -0.54
VRK3-201ENST00000316763 RPL39P5Q59GN2 51 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 SSX9Q7RTT3 188 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 IQCF2Q8IXL9 164 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 OR4S2Q8NH73 311 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 Q8TCH9 128 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 Q8WTZ3 238 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 SDSLQ96GA7 329 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 PSMG3-AS1Q96PY0 264 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 IFI27L2Q9H2X8 130 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 SLC25A22Q9H936 323 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 USP9YO00507 2555 aaPredicted RBP11.66□□□□□ -0.54
VRK3-201ENST00000316763 A0A1W2PPE3 182 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 B9A039 149 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 CLDN34H7C241 214 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 IFNA10P01566 189 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 IGHV2-5P01817 119 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 CGB3P0DN86 165 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 CGB7P0DN87 165 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 HNF4GQ14541 408 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 ZNF674Q2M3X9 581 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 GGACTQ9BVM4 153 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 CTDSP1Q9GZU7 261 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 FAM234AQ9H0X4 552 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 HEYLQ9NQ87 328 aaPredicted RBP11.66□□□□□ -0.54
VRK3-201ENST00000316763 GFOD1Q9NXC2 390 aa11.66□□□□□ -0.54
VRK3-201ENST00000316763 ABCA4P78363 2273 aa11.65□□□□□ -0.54
VRK3-201ENST00000316763 KBTBD11-OT1A0A1B0GTJ5 212 aa11.65□□□□□ -0.54
VRK3-201ENST00000316763 TMEM250H0YL14 139 aa11.65□□□□□ -0.54
VRK3-201ENST00000316763 MPDU1O75352 247 aa11.65□□□□□ -0.54
VRK3-201ENST00000316763 IRF2P14316 349 aa11.65□□□□□ -0.54
VRK3-201ENST00000316763 MDKP21741 143 aaPredicted RBP11.65□□□□□ -0.54
VRK3-201ENST00000316763 COL8A1P27658 744 aa11.65□□□□□ -0.54
VRK3-201ENST00000316763 CD1BP29016 333 aa11.65□□□□□ -0.54
VRK3-201ENST00000316763 RPS16P62249 146 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms