RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 J3QW42 95 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 IGKV1-39P01597 117 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 IGKV1D-39P04432 117 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 VDAC1P21796 283 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 F2RP25116 425 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 UBE2G2P60604 165 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 GNB2P62879 340 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 RPL30P62888 115 aaKnown RBP6.31□□□□□ -1.4
TRIM55-202ENST00000315962 ZNF664Q8N3J9 261 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 DRAM1Q8N682 238 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 SCGB1C1Q8TD33 95 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 NINJ1Q92982 152 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 MAP1LC3BQ9GZQ8 125 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 HES4Q9HCC6 221 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 RNF115Q9Y4L5 304 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 USP9XQ93008 2570 aaPredicted RBP6.31□□□□□ -1.4
TRIM55-202ENST00000315962 A0A1B0GU03 582 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 TMEM30CPA0ZSE6 113 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 XKRY2A2RUG3 117 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 RBMXL2O75526 392 aaKnown RBP6.31□□□□□ -1.4
TRIM55-202ENST00000315962 G6PCP35575 357 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 GNG10P50151 68 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 ID3Q02535 119 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 OR51G1Q8NGK1 321 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 LHX4Q969G2 390 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 C5orf30Q96GV9 206 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 SPIN2AQ99865 258 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 SPIN2BQ9BPZ2 258 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 CBLN4Q9NTU7 201 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 PSENENQ9NZ42 101 aa6.31□□□□□ -1.4
TRIM55-202ENST00000315962 YLPM1P49750 1951 aaKnown RBP6.3□□□□□ -1.4
TRIM55-202ENST00000315962 CLDN1O95832 211 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 GZMBP10144 247 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 ZNF134P52741 427 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 PMS2P11Q13670 270 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 RPL39P5Q59GN2 51 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 GCSAMLQ5JQS6 135 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 OR4F5Q8NH21 305 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 GNPNAT1Q96EK6 184 aaPredicted RBP6.3□□□□□ -1.4
TRIM55-202ENST00000315962 TMEM56Q96MV1 263 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 OR4C12Q96R67 309 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 OR4F4Q96R69 305 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 CLN8Q9UBY8 286 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 TMEM56-RWDD3S4R434 201 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 LRRK2Q5S007 2527 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 ZNF462Q96JM2 2506 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 ZNF737O75373 536 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 MMP23AO75900 390 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 IGKV1-5P01602 117 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 UQCRFS1P47985 274 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 SSX2Q16385 188 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 NCR3LG1Q68D85 454 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 ZDHHC16Q969W1 377 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 SDSLQ96GA7 329 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 RIMS4Q9H426 269 aaPredicted RBP6.3□□□□□ -1.4
TRIM55-202ENST00000315962 DSCAMO60469 2012 aa6.3□□□□□ -1.4
TRIM55-202ENST00000315962 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.29□□□□□ -1.4
TRIM55-202ENST00000315962 SRRM5B3KS81 715 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 SLC31A2O15432 143 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 CLDN14O95500 239 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 UCP1P25874 307 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 MAS1LP35410 378 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 UCP3P55916 312 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 CD81P60033 236 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 RBPJQ06330 500 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 TFF3Q07654 80 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 C1orf229Q6ZS94 237 aaPredicted RBP6.29□□□□□ -1.4
TRIM55-202ENST00000315962 REC114Q7Z4M0 266 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 SLC35E3Q7Z769 313 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 LINC00596Q86U02 117 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 DERL1Q9BUN8 251 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 SDF2L1Q9HCN8 221 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 MBNL3Q9NUK0 354 aaKnown RBP6.29□□□□□ -1.4
TRIM55-202ENST00000315962 ZNF835Q9Y2P0 537 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 ABCA1O95477 2261 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 TNCP24821 2201 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 IGLV3-9A0A075B6K5 115 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 ODAMA1E959 279 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 A6NNC1 897 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 LINC00473A8K010 186 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 C17orf98A8MV24 154 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 CTXN2P0C2S0 81 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 MDH2P40926 338 aaKnown RBP6.29□□□□□ -1.4
TRIM55-202ENST00000315962 GALR1P47211 349 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 SPCS3P61009 180 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 PKIAP61925 76 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 ZNF585BQ52M93 769 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 ACSM6Q6P461 480 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 TCF23Q7RTU1 214 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 MRPL41Q8IXM3 137 aaKnown RBP6.29□□□□□ -1.4
TRIM55-202ENST00000315962 RPP25LQ8N5L8 163 aaKnown RBP6.29□□□□□ -1.4
TRIM55-202ENST00000315962 ZNF525Q8N782 197 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 KDF1Q8NAX2 398 aaPredicted RBP6.29□□□□□ -1.4
TRIM55-202ENST00000315962 ZCCHC14Q8WYQ9 949 aaKnown RBP6.29□□□□□ -1.4
TRIM55-202ENST00000315962 SAP30LQ9HAJ7 183 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 USP24Q9UPU5 2620 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 A0A087WWC5 75 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 GRIFINA4D1Z8 144 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 E7EQL1 145 aa6.29□□□□□ -1.4
TRIM55-202ENST00000315962 SYNGR2O43760 224 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms