RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 AIPO00170 330 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 CHEK1O14757 476 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 SH2D1BO14796 132 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 PSPNO60542 156 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 VSIG8P0DPA2 414 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 GATA3P23771 443 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 DUSP1P28562 367 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 SDC2P34741 201 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 OR10A3P58181 314 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 RPS20P60866 119 aaKnown RBP6.73□□□□□ -1.33
CHD6-201ENST00000309279 EWSR1Q01844 656 aaKnown RBP eCLIP6.73□□□□□ -1.33
CHD6-201ENST00000309279 COL10A1Q03692 680 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 ZNF585BQ52M93 769 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 TCTEX1D4Q5JR98 221 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 CD276Q5ZPR3 534 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 LINC00596Q86U02 117 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 CHST4Q8NCG5 386 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 OR4S2Q8NH73 311 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 CST11Q9H112 138 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 MMP26Q9NRE1 261 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 STEAP1Q9UHE8 339 aa6.73□□□□□ -1.33
CHD6-201ENST00000309279 KIR2DS1A0A191URI9 304 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 TMEM14DPA8MWL7 114 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 SEC14L6B5MCN3 397 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 PPP5D1E7EU14 171 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 C15orf65H3BRN8 121 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 H7C2Y5 167 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 J3QL48 77 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 GEMIN2O14893 280 aaKnown RBP6.72□□□□□ -1.33
CHD6-201ENST00000309279 SLC22A5O76082 557 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 GABARAPO95166 117 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 OR2H2O95918 312 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 IGHG4P01861 327 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 C1QBP02746 253 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 ARSBP15848 533 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 MGMTP16455 207 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 PAX9P55771 341 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 RBM11P57052 281 aaKnown RBP6.72□□□□□ -1.33
CHD6-201ENST00000309279 SELENOTP62341 195 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 UNC119Q13432 240 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 SURF2Q15527 256 aaPredicted RBP6.72□□□□□ -1.33
CHD6-201ENST00000309279 CTF1Q16619 201 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 MPV17LQ2QL34 196 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 PIGYQ3MUY2 71 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 CDNFQ49AH0 187 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 ZNF767PQ75MW2 155 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 GLCCI1Q86VQ1 547 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 LY6G5BQ8NDX9 201 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 C8orf46Q8TAG6 207 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 CCDC107Q8WV48 283 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 FAM3DQ96BQ1 224 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 RAB3CQ96E17 227 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 DCTN5Q9BTE1 182 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 QTRT1Q9BXR0 403 aaKnown RBP6.72□□□□□ -1.33
CHD6-201ENST00000309279 BEX1Q9HBH7 125 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 C1RLQ9NZP8 487 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 OR5V1Q9UGF6 321 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 ZNF107Q9UII5 783 aaPredicted RBP6.72□□□□□ -1.33
CHD6-201ENST00000309279 C14orf166Q9Y224 244 aaKnown RBP6.72□□□□□ -1.33
CHD6-201ENST00000309279 INSIG2Q9Y5U4 225 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 KIAA2026Q5HYC2 2103 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 ANK3Q12955 4377 aaKnown RBP6.72□□□□□ -1.33
CHD6-201ENST00000309279 NAV3Q8IVL0 2385 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 TRAV24A0A0B4J272 114 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 IGHV2-70DA0A0C4DH43 119 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 A0A0G2JMP0 313 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 A0A0X1KG70 313 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 DEGS1O15121 323 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 PDE6DO43924 150 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 ARG1P05089 322 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 CSN2P05814 226 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 TGFBR1P36897 503 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 PKIAP61925 76 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 RPS27AP62979 156 aaKnown RBP6.72□□□□□ -1.33
CHD6-201ENST00000309279 PAX8Q06710 450 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 CD300CQ08708 224 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 SFXN4Q6P4A7 337 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 OR4M2Q8NGB6 313 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 FYTTD1Q96QD9 318 aaKnown RBP6.72□□□□□ -1.33
CHD6-201ENST00000309279 CCDC32Q9BV29 185 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 TM2D1Q9BX74 207 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 BANF2Q9H503 90 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 RPUSD1Q9UJJ7 312 aaKnown RBP6.72□□□□□ -1.33
CHD6-201ENST00000309279 JPT1Q9UK76 154 aa6.72□□□□□ -1.33
CHD6-201ENST00000309279 CUBNO60494 3623 aa6.71□□□□□ -1.33
CHD6-201ENST00000309279 FN1P02751 2386 aaKnown RBP6.71□□□□□ -1.33
CHD6-201ENST00000309279 SIRPB1O00241 398 aa6.71□□□□□ -1.34
CHD6-201ENST00000309279 MGST3O14880 152 aa6.71□□□□□ -1.34
CHD6-201ENST00000309279 TCF21O43680 179 aa6.71□□□□□ -1.34
CHD6-201ENST00000309279 ENSAO43768 121 aaKnown RBP6.71□□□□□ -1.34
CHD6-201ENST00000309279 GGCTO75223 188 aaKnown RBP6.71□□□□□ -1.34
CHD6-201ENST00000309279 OR7C1O76099 320 aaPredicted RBP6.71□□□□□ -1.34
CHD6-201ENST00000309279 TYMSP04818 313 aa6.71□□□□□ -1.34
CHD6-201ENST00000309279 P2RY1P47900 373 aa6.71□□□□□ -1.34
CHD6-201ENST00000309279 LOXL3P58215 753 aa6.71□□□□□ -1.34
CHD6-201ENST00000309279 CKS1BP61024 79 aa6.71□□□□□ -1.34
CHD6-201ENST00000309279 RRAS2P62070 204 aaPredicted RBP6.71□□□□□ -1.34
CHD6-201ENST00000309279 NCS1P62166 190 aa6.71□□□□□ -1.34
CHD6-201ENST00000309279 LSM3P62310 102 aaKnown RBP6.71□□□□□ -1.34
CHD6-201ENST00000309279 MXD1Q05195 221 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms