RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 C19orf54Q5BKX5 351 aa17.35■□□□□ 0.37
SNUPN-201ENST00000308588 SGMS2Q8NHU3 365 aa17.35■□□□□ 0.37
SNUPN-201ENST00000308588 SCGB3A2Q96PL1 93 aa17.35■□□□□ 0.37
SNUPN-201ENST00000308588 CITED2Q99967 270 aaPredicted RBP17.35■□□□□ 0.37
SNUPN-201ENST00000308588 BET1LQ9NYM9 111 aa17.35■□□□□ 0.37
SNUPN-201ENST00000308588 TRAV41A0A0B4J266 112 aa17.34■□□□□ 0.37
SNUPN-201ENST00000308588 C3orf85A0A1B0GTC6 90 aa17.34■□□□□ 0.37
SNUPN-201ENST00000308588 CNIH1O95406 144 aa17.34■□□□□ 0.37
SNUPN-201ENST00000308588 IGKV1-39P01597 117 aa17.34■□□□□ 0.37
SNUPN-201ENST00000308588 IGKV1D-39P04432 117 aa17.34■□□□□ 0.37
SNUPN-201ENST00000308588 CD40LGP29965 261 aa17.34■□□□□ 0.37
SNUPN-201ENST00000308588 MMD2Q8IY49 270 aa17.34■□□□□ 0.37
SNUPN-201ENST00000308588 OR4X2Q8NGF9 303 aa17.34■□□□□ 0.37
SNUPN-201ENST00000308588 GRPEL2Q8TAA5 225 aa17.34■□□□□ 0.37
SNUPN-201ENST00000308588 ABHD5Q8WTS1 349 aa17.34■□□□□ 0.37
SNUPN-201ENST00000308588 MARCH11A6NNE9 402 aa17.33■□□□□ 0.37
SNUPN-201ENST00000308588 KRASP01116 189 aa17.33■□□□□ 0.37
SNUPN-201ENST00000308588 RPA2P15927 270 aa17.33■□□□□ 0.37
SNUPN-201ENST00000308588 TNXAQ16473 311 aa17.33■□□□□ 0.37
SNUPN-201ENST00000308588 SP6Q3SY56 376 aa17.33■□□□□ 0.37
SNUPN-201ENST00000308588 MINDY2Q8NBR6 621 aa17.33■□□□□ 0.37
SNUPN-201ENST00000308588 ADAD2Q8NCV1 583 aaKnown RBP17.33■□□□□ 0.37
SNUPN-201ENST00000308588 DMBX1Q8NFW5 382 aa17.33■□□□□ 0.37
SNUPN-201ENST00000308588 TMEM230Q96A57 120 aa17.33■□□□□ 0.37
SNUPN-201ENST00000308588 TMEM140Q9NV12 185 aa17.33■□□□□ 0.37
SNUPN-201ENST00000308588 NAP1L6A6NFF2 107 aa17.32■□□□□ 0.36
SNUPN-201ENST00000308588 PLA2G10O15496 165 aa17.32■□□□□ 0.36
SNUPN-201ENST00000308588 CREBL2O60519 120 aaPredicted RBP17.32■□□□□ 0.36
SNUPN-201ENST00000308588 IGHG4P01861 327 aa17.32■□□□□ 0.36
SNUPN-201ENST00000308588 G6PCP35575 357 aa17.32■□□□□ 0.36
SNUPN-201ENST00000308588 ZNF846Q147U1 533 aa17.32■□□□□ 0.36
SNUPN-201ENST00000308588 ECSCRQ19T08 205 aa17.32■□□□□ 0.36
SNUPN-201ENST00000308588 AKIRIN2Q53H80 203 aa17.32■□□□□ 0.36
SNUPN-201ENST00000308588 TEX38Q6PEX7 206 aa17.32■□□□□ 0.36
SNUPN-201ENST00000308588 LFNGQ8NES3 379 aa17.32■□□□□ 0.36
SNUPN-201ENST00000308588 OR4A5Q8NH83 315 aa17.32■□□□□ 0.36
SNUPN-201ENST00000308588 SLC25A21Q9BQT8 299 aaPredicted RBP17.32■□□□□ 0.36
SNUPN-201ENST00000308588 WDR12Q9GZL7 423 aaKnown RBP17.32■□□□□ 0.36
SNUPN-201ENST00000308588 NAA60Q9H7X0 242 aa17.32■□□□□ 0.36
SNUPN-201ENST00000308588 TRAV3A0A0B4J244 114 aa17.31■□□□□ 0.36
SNUPN-201ENST00000308588 CRYM-AS1A6NIL9 109 aa17.31■□□□□ 0.36
SNUPN-201ENST00000308588 SERPINE2P07093 398 aa17.31■□□□□ 0.36
SNUPN-201ENST00000308588 CCR6P51684 374 aa17.31■□□□□ 0.36
SNUPN-201ENST00000308588 TMEM267Q0VDI3 215 aaPredicted RBP17.31■□□□□ 0.36
SNUPN-201ENST00000308588 C10orf55Q5SWW7 151 aa17.31■□□□□ 0.36
SNUPN-201ENST00000308588 CADM3Q8N126 398 aa17.31■□□□□ 0.36
SNUPN-201ENST00000308588 COMMD1Q8N668 190 aa17.31■□□□□ 0.36
SNUPN-201ENST00000308588 C7orf50Q9BRJ6 194 aaKnown RBP17.31■□□□□ 0.36
SNUPN-201ENST00000308588 TEX13DA0A0J9YY54 714 aaPredicted RBP17.31■□□□□ 0.36
SNUPN-201ENST00000308588 ADARB2-AS1A8MUL3 147 aa17.31■□□□□ 0.36
SNUPN-201ENST00000308588 UPK2O00526 184 aa17.31■□□□□ 0.36
SNUPN-201ENST00000308588 UCP1P25874 307 aa17.31■□□□□ 0.36
SNUPN-201ENST00000308588 BTCP35070 178 aa17.31■□□□□ 0.36
SNUPN-201ENST00000308588 ERVK-16P61578 105 aa17.31■□□□□ 0.36
SNUPN-201ENST00000308588 RPL8P62917 257 aaKnown RBP17.31■□□□□ 0.36
SNUPN-201ENST00000308588 UNQ5815/PRO19632Q6UWF5 114 aa17.31■□□□□ 0.36
SNUPN-201ENST00000308588 SRSF12Q8WXF0 261 aaKnown RBP17.31■□□□□ 0.36
SNUPN-201ENST00000308588 SEC22AQ96IW7 307 aa17.31■□□□□ 0.36
SNUPN-201ENST00000308588 TCRBV4S1A1TA0A5B7 111 aa17.3■□□□□ 0.36
SNUPN-201ENST00000308588 MSGN1A6NI15 193 aa17.3■□□□□ 0.36
SNUPN-201ENST00000308588 CENPXA8MT69 81 aa17.3■□□□□ 0.36
SNUPN-201ENST00000308588 SOX15O60248 233 aa17.3■□□□□ 0.36
SNUPN-201ENST00000308588 B3GALNT1O75752 331 aa17.3■□□□□ 0.36
SNUPN-201ENST00000308588 ACTL6BO94805 426 aa17.3■□□□□ 0.36
SNUPN-201ENST00000308588 IGLV1-40P01703 118 aa17.3■□□□□ 0.36
SNUPN-201ENST00000308588 OR5AC1P0C628 307 aa17.3■□□□□ 0.36
SNUPN-201ENST00000308588 PSMB8P28062 276 aa17.3■□□□□ 0.36
SNUPN-201ENST00000308588 FOXE3Q13461 319 aa17.3■□□□□ 0.36
SNUPN-201ENST00000308588 ASPHD1Q5U4P2 390 aa17.3■□□□□ 0.36
SNUPN-201ENST00000308588 RNF152Q8N8N0 203 aa17.3■□□□□ 0.36
SNUPN-201ENST00000308588 GLYATL2Q8WU03 294 aa17.3■□□□□ 0.36
SNUPN-201ENST00000308588 TET2Q6N021 2002 aaPredicted RBP17.3■□□□□ 0.36
SNUPN-201ENST00000308588 A0A1W2PN81 502 aa17.29■□□□□ 0.36
SNUPN-201ENST00000308588 E7EUB6 86 aa17.29■□□□□ 0.36
SNUPN-201ENST00000308588 ELANEP08246 267 aa17.29■□□□□ 0.36
SNUPN-201ENST00000308588 MYOD1P15172 320 aa17.29■□□□□ 0.36
SNUPN-201ENST00000308588 HLA-GP17693 338 aa17.29■□□□□ 0.36
SNUPN-201ENST00000308588 MAS1LP35410 378 aa17.29■□□□□ 0.36
SNUPN-201ENST00000308588 CHRNA7P36544 502 aa17.29■□□□□ 0.36
SNUPN-201ENST00000308588 RBMS2Q15434 407 aaKnown RBP17.29■□□□□ 0.36
SNUPN-201ENST00000308588 LCNL1Q6ZST4 164 aa17.29■□□□□ 0.36
SNUPN-201ENST00000308588 NDUFA11Q86Y39 141 aa17.29■□□□□ 0.36
SNUPN-201ENST00000308588 TMEM222Q9H0R3 208 aa17.29■□□□□ 0.36
SNUPN-201ENST00000308588 OPN1MWP04001 364 aa17.28■□□□□ 0.36
SNUPN-201ENST00000308588 OPN1MW2P0DN77 364 aa17.28■□□□□ 0.36
SNUPN-201ENST00000308588 OPN1MW3P0DN78 364 aa17.28■□□□□ 0.36
SNUPN-201ENST00000308588 AKR1C4P17516 323 aa17.28■□□□□ 0.36
SNUPN-201ENST00000308588 SUPT4H1P63272 117 aaKnown RBP17.28■□□□□ 0.36
SNUPN-201ENST00000308588 SGPP2Q8IWX5 399 aa17.28■□□□□ 0.36
SNUPN-201ENST00000308588 GALNT14Q96FL9 552 aa17.28■□□□□ 0.36
SNUPN-201ENST00000308588 KLK15Q9H2R5 256 aa17.28■□□□□ 0.36
SNUPN-201ENST00000308588 FOXA2Q9Y261 457 aaPredicted RBP17.28■□□□□ 0.36
SNUPN-201ENST00000308588 TSSC4Q9Y5U2 329 aaPredicted RBP17.28■□□□□ 0.36
SNUPN-201ENST00000308588 TRRAPQ9Y4A5 3859 aa17.28■□□□□ 0.36
SNUPN-201ENST00000308588 A0A1B0GW64 132 aa17.27■□□□□ 0.36
SNUPN-201ENST00000308588 LYRM1O43325 122 aa17.27■□□□□ 0.36
SNUPN-201ENST00000308588 NDUFB6O95139 128 aa17.27■□□□□ 0.36
SNUPN-201ENST00000308588 RPLP1P05386 114 aaKnown RBP17.27■□□□□ 0.36
SNUPN-201ENST00000308588 FGF2P09038 288 aa17.27■□□□□ 0.36
SNUPN-201ENST00000308588 OR9G9P0C7N8 305 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms