RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 WSB1Q9Y6I7 421 aa10.36□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 HIVEP1P15822 2718 aa10.36□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 KANTRA0A1W2PQU2 76 aa10.35□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 SRRM4A7MD48 611 aaKnown RBP10.35□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 TMEM50AO95807 157 aa10.35□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 AP2S1P53680 142 aaPredicted RBP10.35□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 UBE2KP61086 200 aa10.35□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 VAMP2P63027 116 aa10.35□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 TMEM249Q2WGJ8 235 aa10.35□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 LDLRAD2Q5SZI1 272 aa10.35□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 OR4A47Q6IF82 309 aa10.35□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 PUSL1Q8N0Z8 303 aaKnown RBP10.35□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 LINC01356Q8N9X3 169 aa10.35□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 OR4A16Q8NH70 328 aa10.35□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 ARPC5LQ9BPX5 153 aa10.35□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 SLC25A31Q9H0C2 315 aa10.35□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 MAGT1Q9H0U3 335 aa10.35□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 LYRM2Q9NU23 88 aaPredicted RBP10.35□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 TBL2Q9Y4P3 447 aaKnown RBP10.35□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 TRAV20A0A0B4J274 112 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 A0A1W2PPI3 338 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 H7C2Y5 167 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 UPK2O00526 184 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 SHOXO15266 292 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 KCNAB3O43448 404 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 SSSCA1O60232 199 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 SPCS3P61009 180 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 RPL23AP62750 156 aaKnown RBP10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 TEX261Q6UWH6 196 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 ZNF767PQ75MW2 155 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 OR4A5Q8NH83 315 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 VSTM2AQ8TAG5 236 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 TMEM14BQ9NUH8 114 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 FOXA2Q9Y261 457 aaPredicted RBP10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 U3KQ87 197 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 TSC22D2O75157 780 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 GATA3P23771 443 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 CD1BP29016 333 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 PRB3Q04118 309 aaPredicted RBP10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 KLRD1Q13241 179 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 CCDC144NLQ6NUI1 221 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 SSX9Q7RTT3 188 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 VKORC1L1Q8N0U8 176 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 TMEM252Q8N6L7 170 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 ZNF680Q8NEM1 530 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 CIB3Q96Q77 187 aaPredicted RBP10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 MS4A7Q9GZW8 240 aaPredicted RBP10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 RBKSQ9H477 322 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 CYTL1Q9NRR1 136 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 FKBP11Q9NYL4 201 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 PRNDQ9UKY0 176 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 ZNF257Q9Y2Q1 563 aa10.34□□□□□ -0.75
SHANK2-AS3-201ENST00000307548 ZANQ9Y493 2812 aa10.33□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 C15orf61A6NNL5 157 aa10.33□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 IGLV2-23P01705 113 aa10.33□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 HSPE1P61604 102 aaKnown RBP10.33□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 RPS16P62249 146 aaKnown RBP10.33□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 BAXQ07812 192 aa10.33□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 STOML3Q8TAV4 291 aa10.33□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 MALSU1Q96EH3 234 aa10.33□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 HARBI1Q96MB7 349 aa10.33□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 QTRT1Q9BXR0 403 aaKnown RBP10.33□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 HIF1ANQ9NWT6 349 aa10.33□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 F8P00451 2351 aa10.33□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 FLNAP21333 2647 aaKnown RBP10.33□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 TRAV3A0A0B4J244 114 aa10.32□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 FAM24AA6NFZ4 105 aa10.32□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 KBTBD11O94819 623 aa10.32□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 IFNA7P01567 189 aa10.32□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 SAA1P0DJI8 122 aaPredicted RBP10.32□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 LGALS4P56470 323 aa10.32□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 UBA52P62987 128 aaKnown RBP10.32□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 EWSR1Q01844 656 aaKnown RBP eCLIP10.32□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 MOB3BQ86TA1 216 aa10.32□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 TEX45Q8NA69 505 aa10.32□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 OR8H1Q8NGG4 311 aa10.32□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 TMEM167AQ8TBQ9 72 aa10.32□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 CFHR4Q92496 578 aa10.32□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 ZC4H2Q9NQZ6 224 aa10.32□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 ITGB1BP2Q9UKP3 347 aa10.32□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 WNK2Q9Y3S1 2297 aa10.32□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 IGSF23A1L1A6 192 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 RBMXL2O75526 392 aaKnown RBP10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 CRYGBP07316 175 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 CAV2P51636 162 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 EIF5AP63241 154 aaKnown RBP10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 KRTAP1-1Q07627 177 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 VMA21Q3ZAQ7 101 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 DMRTA1Q5VZB9 504 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 LHFPL4Q7Z7J7 247 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 STPG2Q8N412 459 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 DTD1Q8TEA8 209 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 PHYHIPLQ96FC7 376 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 AJUBAQ96IF1 538 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 TSNAXQ99598 290 aaKnown RBP10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 PSENENQ9NZ42 101 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 ACANP16112 2415 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 CENPVL3A0A0U1RRI6 287 aa10.31□□□□□ -0.76
SHANK2-AS3-201ENST00000307548 TIMM23O14925 209 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms