RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 STPG3Q8N7X2 389 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 SAT2Q96F10 170 aaPredicted RBP7.7□□□□□ -1.18
PTPRE-202ENST00000306042 TRAF4Q9BUZ4 470 aaPredicted RBP7.7□□□□□ -1.18
PTPRE-202ENST00000306042 PEMTQ9UBM1 199 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 BOLA1Q9Y3E2 137 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 MINOS1-NBL1R4GNA1 71 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 MYO18BQ8IUG5 2567 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 PCDH15Q96QU1 1955 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 SAA2-SAA4A0A096LPE2 208 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 IGKV1-12A0A0C4DH73 117 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 IGKV1D-12P01611 117 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 RD3LP0DJH9 198 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 SAA2P0DJI9 122 aaPredicted RBP7.7□□□□□ -1.18
PTPRE-202ENST00000306042 MIDNQ504T8 468 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 EBLN2Q6P2I7 272 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 LYPD2Q6UXB3 125 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 CD177Q8N6Q3 437 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 NPVFQ9HCQ7 196 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 FBXL17Q9UF56 701 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 NAGKQ9UJ70 344 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 AP4M1O00189 453 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 SOD3P08294 240 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 NTF4P34130 210 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 RAB9AP51151 201 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 OR52M1Q8NGK5 317 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 ALX4Q9H161 411 aaPredicted RBP7.7□□□□□ -1.18
PTPRE-202ENST00000306042 TCRBV4S1A1TA0A5B7 111 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 CLN5O75503 358 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 SELENOTP62341 195 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 STXBP6Q8NFX7 210 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 OR5B3Q8NH48 314 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 RNF138Q8WVD3 245 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 GAFA1Q96PS6 74 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 DENND4AQ7Z401 1863 aa7.7□□□□□ -1.18
PTPRE-202ENST00000306042 SHISA3A0PJX4 238 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 HMGN3Q15651 99 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 SLC16A13Q7RTY0 426 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 GPR146Q96CH1 333 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 TMEM131Q92545 1883 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 IGHV3-35A0A0C4DH35 117 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 ZNF727A8MUV8 499 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 OOSP1A8MZH6 123 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 CD1BP29016 333 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 EXOSC2Q13868 293 aaKnown RBP7.69□□□□□ -1.18
PTPRE-202ENST00000306042 GAMTQ14353 236 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 FBXL7Q9UJT9 491 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 MAP1LC3B2A6NCE7 125 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 PLA2G10O15496 165 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 PSPNO60542 156 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 SNAPINO95295 136 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 CGAP01215 116 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 MT-ND4LP03901 98 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 ZP1P60852 638 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 FHL1Q13642 323 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 TMEM42Q69YG0 159 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 MARC2Q969Z3 335 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 CABLES2Q9BTV7 478 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 MAP1LC3BQ9GZQ8 125 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 IGKV1-27A0A075B6S5 117 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 ATP6V1G1O75348 118 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 OR10J1P30954 320 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 IL22RA2Q969J5 263 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 NXF2Q9GZY0 626 aaKnown RBP7.69□□□□□ -1.18
PTPRE-202ENST00000306042 RBKSQ9H477 322 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 TMEM167BQ9NRX6 74 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 FBLN5Q9UBX5 448 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 MOB4Q9Y3A3 225 aa7.69□□□□□ -1.18
PTPRE-202ENST00000306042 FAM90A26D6RGX4 464 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 MELTFP08582 738 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 NPPCP23582 126 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 NUTF2P61970 127 aaKnown RBP7.68□□□□□ -1.18
PTPRE-202ENST00000306042 NSUN5P1Q3KNT7 163 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 SAMD13Q5VXD3 122 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 SELENOHQ8IZQ5 122 aaKnown RBP7.68□□□□□ -1.18
PTPRE-202ENST00000306042 OR4P4Q8NGL7 312 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 RXFP4Q8TDU9 374 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 CXorf58Q96LI9 332 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 TLN1Q9Y490 2541 aaKnown RBP7.68□□□□□ -1.18
PTPRE-202ENST00000306042 TRBV6-7A0A0A0MS04 114 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 IGHV3-11P01762 117 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 HIST1H1EP10412 219 aaKnown RBP7.68□□□□□ -1.18
PTPRE-202ENST00000306042 EWSR1Q01844 656 aaKnown RBP eCLIP7.68□□□□□ -1.18
PTPRE-202ENST00000306042 TMEM219Q86XT9 240 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 CCDC28AQ8IWP9 274 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 C16orf92Q96LL3 132 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 ABCA1O95477 2261 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 IGKV1D-17A0A075B6S4 117 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 ZNF503-AS2A6NEH8 195 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 SHISA9B4DS77 424 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 J3KRW8 73 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 ZNF137PP52743 207 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 PJVKQ0ZLH3 352 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 FOXL1Q12952 345 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 TM4SF20Q53R12 229 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 OR4A47Q6IF82 309 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 BTF3L4Q96K17 158 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 HS3ST6Q96QI5 342 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 SLC2A8Q9NY64 477 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 MSGN1A6NI15 193 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 C17orf98A8MV24 154 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms