RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 F2Z2F3 143 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 NKX2-8O15522 239 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 IFNA1P01562 189 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 CRYABP02511 175 aaKnown RBP11.25□□□□□ -0.61
CTDP1-202ENST00000299543 MSMO1Q15800 293 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 FFAR4Q5NUL3 377 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 LDLRAD2Q5SZI1 272 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 C19orf67A6NJJ6 358 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.25□□□□□ -0.61
CTDP1-202ENST00000299543 UBE2G2P60604 165 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 MDS2Q8NDY4 140 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 OR10P1Q8NGE3 313 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 ZNF596Q8TC21 504 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 RNF212BA8MTL3 300 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 TFF3Q07654 80 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 ATP6V1FQ16864 119 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 ACSM6Q6P461 480 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 VWA1Q6PCB0 445 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 OR10G4Q8NGN3 311 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 OR10G9Q8NGN4 311 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 OR10G7Q8NGN6 311 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 ZCCHC14Q8WYQ9 949 aaKnown RBP11.25□□□□□ -0.61
CTDP1-202ENST00000299543 ZDHHC11Q9H8X9 412 aa11.25□□□□□ -0.61
CTDP1-202ENST00000299543 CISD1Q9NZ45 108 aaKnown RBP11.25□□□□□ -0.61
CTDP1-202ENST00000299543 PNRC1Q12796 327 aaPredicted RBP11.24□□□□□ -0.61
CTDP1-202ENST00000299543 CATR1Q13166 79 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 SMIM15Q7Z3B0 74 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 TMEM178AQ8NBL3 297 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 ZC2HC1AQ96GY0 325 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 GP6Q9HCN6 339 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 MANBALQ9NQG1 85 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.24□□□□□ -0.61
CTDP1-202ENST00000299543 PKDREJQ9NTG1 2253 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.24□□□□□ -0.61
CTDP1-202ENST00000299543 NKX6-3A6NJ46 265 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 MLNRO43193 412 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 CDKN1BP46527 198 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 SUMO1P63165 101 aaKnown RBP11.24□□□□□ -0.61
CTDP1-202ENST00000299543 MRGPRGQ86SM5 289 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 VKORC1L1Q8N0U8 176 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 TMEM170AQ8WVE7 144 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 WNT10AQ9GZT5 417 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 GAL3ST2Q9H3Q3 398 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 GNG12Q9UBI6 72 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 PIGBOS1A0A0B4J2F0 54 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 CDX4O14627 284 aaPredicted RBP11.24□□□□□ -0.61
CTDP1-202ENST00000299543 SLC25A6P12236 298 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 PMCHP20382 165 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 PSMB3P49720 205 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 SERF2P84101 59 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 Q6ZR03 302 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 ZNF645Q8N7E2 425 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 OR51G1Q8NGK1 321 aa11.24□□□□□ -0.61
CTDP1-202ENST00000299543 ZNF318Q5VUA4 2279 aa11.23□□□□□ -0.61
CTDP1-202ENST00000299543 TNRC6AQ8NDV7 1962 aaKnown RBP11.23□□□□□ -0.61
CTDP1-202ENST00000299543 A8MXE2 369 aa11.23□□□□□ -0.61
CTDP1-202ENST00000299543 CRYAAP02489 173 aa11.23□□□□□ -0.61
CTDP1-202ENST00000299543 NTF3P20783 257 aa11.23□□□□□ -0.61
CTDP1-202ENST00000299543 RIPPLY3P57055 190 aa11.23□□□□□ -0.61
CTDP1-202ENST00000299543 ERVK11-1P61568 191 aa11.23□□□□□ -0.61
CTDP1-202ENST00000299543 ZNF146Q15072 292 aa11.23□□□□□ -0.61
CTDP1-202ENST00000299543 ACOT6Q3I5F7 207 aaPredicted RBP11.23□□□□□ -0.61
CTDP1-202ENST00000299543 OR13A1Q8NGR1 328 aa11.23□□□□□ -0.61
CTDP1-202ENST00000299543 FAM122AQ96E09 287 aa11.23□□□□□ -0.61
CTDP1-202ENST00000299543 PAGE4O60829 102 aa11.23□□□□□ -0.61
CTDP1-202ENST00000299543 FCGR3BO75015 233 aa11.23□□□□□ -0.61
CTDP1-202ENST00000299543 GOSR1O95249 250 aa11.23□□□□□ -0.61
CTDP1-202ENST00000299543 SP9P0CG40 484 aa11.23□□□□□ -0.61
CTDP1-202ENST00000299543 PINX1Q96BK5 328 aaKnown RBP11.23□□□□□ -0.61
CTDP1-202ENST00000299543 LRRC30A6NM36 301 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 ITGB1BP1O14713 200 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 EDDM3BP56851 147 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 SELENOTP62341 195 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 MEF2BQ02080 365 aaPredicted RBP11.22□□□□□ -0.61
CTDP1-202ENST00000299543 COA6Q5JTJ3 125 aaKnown RBP11.22□□□□□ -0.61
CTDP1-202ENST00000299543 C5orf30Q96GV9 206 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 ACY3Q96HD9 319 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 GMPPAQ96IJ6 420 aaPredicted RBP11.22□□□□□ -0.61
CTDP1-202ENST00000299543 TMEM204Q9BSN7 226 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 YLPM1P49750 1951 aaKnown RBP11.22□□□□□ -0.61
CTDP1-202ENST00000299543 PIEZO2Q9H5I5 2752 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 TNRC6BQ9UPQ9 1833 aaKnown RBP11.22□□□□□ -0.61
CTDP1-202ENST00000299543 IGHV3OR15-7A0A075B7D8 119 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 GCSAMLQ5JQS6 135 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 TPTE2P1Q5T6R2 138 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 C1orf185Q5T7R7 199 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 OR2Z1Q8NG97 314 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 MBD3L1Q8WWY6 194 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 COQ2Q96H96 371 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 PSMG3Q9BT73 122 aaPredicted RBP11.22□□□□□ -0.61
CTDP1-202ENST00000299543 MBNL3Q9NUK0 354 aaKnown RBP11.22□□□□□ -0.61
CTDP1-202ENST00000299543 PGPEP1LA6NFU8 196 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 OOEPA6NGQ2 149 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 LINC00473A8K010 186 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 KCNIP4Q6PIL6 250 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 FAM214BQ7L5A3 538 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 STARD4Q96DR4 205 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 HINT2Q9BX68 163 aa11.22□□□□□ -0.61
CTDP1-202ENST00000299543 TRAV1-1A0A0B4J248 108 aa11.21□□□□□ -0.61
CTDP1-202ENST00000299543 FOXF2Q12947 444 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms