RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CEACAM3P40198 252 aa16.85■□□□□ 0.29
SMCO4-201ENST00000298966 RPL30P62888 115 aaKnown RBP16.85■□□□□ 0.29
SMCO4-201ENST00000298966 IAH1Q2TAA2 248 aaPredicted RBP16.85■□□□□ 0.29
SMCO4-201ENST00000298966 RPL39P5Q59GN2 51 aa16.85■□□□□ 0.29
SMCO4-201ENST00000298966 THOC7Q6I9Y2 204 aaKnown RBP16.85■□□□□ 0.29
SMCO4-201ENST00000298966 LAMTOR1Q6IAA8 161 aa16.85■□□□□ 0.29
SMCO4-201ENST00000298966 TMEM65Q6PI78 240 aa16.85■□□□□ 0.29
SMCO4-201ENST00000298966 ZBTB8BQ8NAP8 495 aaPredicted RBP16.85■□□□□ 0.29
SMCO4-201ENST00000298966 DDB2Q92466 427 aa16.85■□□□□ 0.29
SMCO4-201ENST00000298966 ST6GALNAC6Q969X2 333 aa16.85■□□□□ 0.29
SMCO4-201ENST00000298966 LINC00473A8K010 186 aa16.84■□□□□ 0.29
SMCO4-201ENST00000298966 MPTX1A8MV57 137 aa16.84■□□□□ 0.29
SMCO4-201ENST00000298966 APOA2P02652 100 aa16.84■□□□□ 0.29
SMCO4-201ENST00000298966 PET100P0DJ07 73 aa16.84■□□□□ 0.29
SMCO4-201ENST00000298966 LPAR6P43657 344 aa16.84■□□□□ 0.29
SMCO4-201ENST00000298966 RTL8BQ17RB0 113 aa16.84■□□□□ 0.29
SMCO4-201ENST00000298966 ZNF585BQ52M93 769 aa16.84■□□□□ 0.29
SMCO4-201ENST00000298966 RRNAD1Q96FB5 475 aaKnown RBP16.84■□□□□ 0.29
SMCO4-201ENST00000298966 CACFD1Q9UGQ2 172 aa16.84■□□□□ 0.29
SMCO4-201ENST00000298966 MPC2O95563 127 aa16.83■□□□□ 0.28
SMCO4-201ENST00000298966 MC5RP33032 325 aa16.83■□□□□ 0.28
SMCO4-201ENST00000298966 NMSQ5H8A3 153 aa16.83■□□□□ 0.28
SMCO4-201ENST00000298966 UTF1Q5T230 341 aa16.83■□□□□ 0.28
SMCO4-201ENST00000298966 C11orf87Q6NUJ2 197 aa16.83■□□□□ 0.28
SMCO4-201ENST00000298966 VMO1Q7Z5L0 202 aa16.83■□□□□ 0.28
SMCO4-201ENST00000298966 TGIF2LXQ8IUE1 241 aa16.83■□□□□ 0.28
SMCO4-201ENST00000298966 OR5R1Q8NH85 324 aa16.83■□□□□ 0.28
SMCO4-201ENST00000298966 RNASE11Q8TAA1 199 aaKnown RBP16.83■□□□□ 0.28
SMCO4-201ENST00000298966 DNAH3Q8TD57 4116 aa16.82■□□□□ 0.28
SMCO4-201ENST00000298966 A0A1B0GU03 582 aa16.82■□□□□ 0.28
SMCO4-201ENST00000298966 FAM90A9PA6NNJ1 464 aa16.82■□□□□ 0.28
SMCO4-201ENST00000298966 LEUTXA8MZ59 168 aa16.82■□□□□ 0.28
SMCO4-201ENST00000298966 OOSP1A8MZH6 123 aa16.82■□□□□ 0.28
SMCO4-201ENST00000298966 BUB1B-PAK6H3BSN5 160 aa16.82■□□□□ 0.28
SMCO4-201ENST00000298966 GAPDHP04406 335 aaKnown RBP16.82■□□□□ 0.28
SMCO4-201ENST00000298966 RAB13P51153 203 aa16.82■□□□□ 0.28
SMCO4-201ENST00000298966 AKR1C2P52895 323 aa16.82■□□□□ 0.28
SMCO4-201ENST00000298966 ZNF816Q0VGE8 651 aaPredicted RBP16.82■□□□□ 0.28
SMCO4-201ENST00000298966 MINOS1Q5TGZ0 78 aa16.82■□□□□ 0.28
SMCO4-201ENST00000298966 PNKDQ8N490 385 aa16.82■□□□□ 0.28
SMCO4-201ENST00000298966 GRPEL2Q8TAA5 225 aa16.82■□□□□ 0.28
SMCO4-201ENST00000298966 THAP6Q8TBB0 222 aa16.82■□□□□ 0.28
SMCO4-201ENST00000298966 AURKAIP1Q9NWT8 199 aaPredicted RBP16.82■□□□□ 0.28
SMCO4-201ENST00000298966 COA4Q9NYJ1 87 aa16.82■□□□□ 0.28
SMCO4-201ENST00000298966 HSPB11Q9Y547 144 aa16.82■□□□□ 0.28
SMCO4-201ENST00000298966 MINOS1-NBL1R4GNA1 71 aa16.82■□□□□ 0.28
SMCO4-201ENST00000298966 FXYD6-FXYD2A0A087WZ82 144 aa16.81■□□□□ 0.28
SMCO4-201ENST00000298966 ODF3BA8MYP8 253 aa16.81■□□□□ 0.28
SMCO4-201ENST00000298966 FCGR3BO75015 233 aa16.81■□□□□ 0.28
SMCO4-201ENST00000298966 CT45A6P0DMU7 189 aa16.81■□□□□ 0.28
SMCO4-201ENST00000298966 CT45A5P0DMU8 189 aa16.81■□□□□ 0.28
SMCO4-201ENST00000298966 CT45A7P0DMV0 189 aa16.81■□□□□ 0.28
SMCO4-201ENST00000298966 LYL1P12980 280 aa16.81■□□□□ 0.28
SMCO4-201ENST00000298966 C4BPBP20851 252 aa16.81■□□□□ 0.28
SMCO4-201ENST00000298966 COX7A1P24310 79 aa16.81■□□□□ 0.28
SMCO4-201ENST00000298966 HTR1DP28221 377 aa16.81■□□□□ 0.28
SMCO4-201ENST00000298966 OXLD1Q5BKU9 147 aa16.81■□□□□ 0.28
SMCO4-201ENST00000298966 PDPNQ86YL7 162 aa16.81■□□□□ 0.28
SMCO4-201ENST00000298966 C11orf44Q8N8P7 122 aa16.81■□□□□ 0.28
SMCO4-201ENST00000298966 ZNF383Q8NA42 475 aa16.81■□□□□ 0.28
SMCO4-201ENST00000298966 OR5AN1Q8NGI8 311 aa16.81■□□□□ 0.28
SMCO4-201ENST00000298966 OR4P4Q8NGL7 312 aa16.81■□□□□ 0.28
SMCO4-201ENST00000298966 SIRT7Q9NRC8 400 aa16.81■□□□□ 0.28
SMCO4-201ENST00000298966 TBL2Q9Y4P3 447 aaKnown RBP16.81■□□□□ 0.28
SMCO4-201ENST00000298966 RNASEK-C17orf49H0YIS7 233 aa16.8■□□□□ 0.28
SMCO4-201ENST00000298966 HRASP01112 189 aa16.8■□□□□ 0.28
SMCO4-201ENST00000298966 NQO2P16083 231 aa16.8■□□□□ 0.28
SMCO4-201ENST00000298966 ERVK-16P61578 105 aa16.8■□□□□ 0.28
SMCO4-201ENST00000298966 LGALSLQ3ZCW2 172 aaPredicted RBP16.8■□□□□ 0.28
SMCO4-201ENST00000298966 PRSS54Q6PEW0 395 aa16.8■□□□□ 0.28
SMCO4-201ENST00000298966 OSR1Q8TAX0 266 aaPredicted RBP16.8■□□□□ 0.28
SMCO4-201ENST00000298966 RPEQ96AT9 228 aa16.8■□□□□ 0.28
SMCO4-201ENST00000298966 SLC35D1Q9NTN3 355 aa16.8■□□□□ 0.28
SMCO4-201ENST00000298966 GSKIPQ9P0R6 139 aa16.8■□□□□ 0.28
SMCO4-201ENST00000298966 DPM3Q9P2X0 92 aa16.8■□□□□ 0.28
SMCO4-201ENST00000298966 TENM3Q9P273 2699 aa16.8■□□□□ 0.28
SMCO4-201ENST00000298966 RAMP3O60896 148 aa16.79■□□□□ 0.28
SMCO4-201ENST00000298966 IGKV1-39P01597 117 aa16.79■□□□□ 0.28
SMCO4-201ENST00000298966 IGKV1D-39P04432 117 aa16.79■□□□□ 0.28
SMCO4-201ENST00000298966 ARG1P05089 322 aa16.79■□□□□ 0.28
SMCO4-201ENST00000298966 UBE2E1P51965 193 aa16.79■□□□□ 0.28
SMCO4-201ENST00000298966 BRWD1-AS2P59051 145 aa16.79■□□□□ 0.28
SMCO4-201ENST00000298966 POU2AF1Q16633 256 aa16.79■□□□□ 0.28
SMCO4-201ENST00000298966 LRRC37A5PQ49AS3 106 aa16.79■□□□□ 0.28
SMCO4-201ENST00000298966 CCDC144NLQ6NUI1 221 aa16.79■□□□□ 0.28
SMCO4-201ENST00000298966 ZNF546Q86UE3 836 aa16.79■□□□□ 0.28
SMCO4-201ENST00000298966 OR8H3Q8N146 312 aa16.79■□□□□ 0.28
SMCO4-201ENST00000298966 OR4D5Q8NGN0 318 aa16.79■□□□□ 0.28
SMCO4-201ENST00000298966 CFHR4Q92496 578 aa16.79■□□□□ 0.28
SMCO4-201ENST00000298966 NABP2Q9BQ15 211 aa16.79■□□□□ 0.28
SMCO4-201ENST00000298966 TNFSF18Q9UNG2 199 aa16.79■□□□□ 0.28
SMCO4-201ENST00000298966 SIGLEC9Q9Y336 463 aa16.79■□□□□ 0.28
SMCO4-201ENST00000298966 FAM90A26D6RGX4 464 aa16.78■□□□□ 0.28
SMCO4-201ENST00000298966 LY6LH3BQJ8 138 aa16.78■□□□□ 0.28
SMCO4-201ENST00000298966 NPFFO15130 113 aa16.78■□□□□ 0.28
SMCO4-201ENST00000298966 S1PR2O95136 353 aa16.78■□□□□ 0.28
SMCO4-201ENST00000298966 RLN2P04090 185 aa16.78■□□□□ 0.28
SMCO4-201ENST00000298966 RAB32Q13637 225 aa16.78■□□□□ 0.28
SMCO4-201ENST00000298966 SMCO1Q147U7 214 aa16.78■□□□□ 0.28
SMCO4-201ENST00000298966 HCP5Q6MZN7 132 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms