RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 SHOXO15266 292 aa20.8■□□□□ 0.92
SDCCAG3-201ENST00000298537 ARF6P62330 175 aa20.8■□□□□ 0.92
SDCCAG3-201ENST00000298537 HBG1P69891 147 aa20.8■□□□□ 0.92
SDCCAG3-201ENST00000298537 HBG2P69892 147 aa20.8■□□□□ 0.92
SDCCAG3-201ENST00000298537 PJVKQ0ZLH3 352 aa20.8■□□□□ 0.92
SDCCAG3-201ENST00000298537 Q8N7P7 452 aa20.8■□□□□ 0.92
SDCCAG3-201ENST00000298537 VSIRQ9H7M9 311 aa20.8■□□□□ 0.92
SDCCAG3-201ENST00000298537 SIRT7Q9NRC8 400 aa20.8■□□□□ 0.92
SDCCAG3-201ENST00000298537 RRHO14718 337 aa20.79■□□□□ 0.92
SDCCAG3-201ENST00000298537 BLOC1S1P78537 153 aa20.79■□□□□ 0.92
SDCCAG3-201ENST00000298537 TMEM14BQ9NUH8 114 aa20.79■□□□□ 0.92
SDCCAG3-201ENST00000298537 IFNA5P01569 189 aa20.79■□□□□ 0.92
SDCCAG3-201ENST00000298537 IL6RP08887 468 aaPredicted RBP20.79■□□□□ 0.92
SDCCAG3-201ENST00000298537 C8orf31Q8N9H6 132 aa20.79■□□□□ 0.92
SDCCAG3-201ENST00000298537 LY6G5BQ8NDX9 201 aa20.79■□□□□ 0.92
SDCCAG3-201ENST00000298537 C8orf46Q8TAG6 207 aa20.79■□□□□ 0.92
SDCCAG3-201ENST00000298537 TMEM186Q96B77 213 aa20.79■□□□□ 0.92
SDCCAG3-201ENST00000298537 HARBI1Q96MB7 349 aa20.79■□□□□ 0.92
SDCCAG3-201ENST00000298537 HRASP01112 189 aa20.78■□□□□ 0.92
SDCCAG3-201ENST00000298537 IGLV1-47P01700 117 aa20.78■□□□□ 0.92
SDCCAG3-201ENST00000298537 POU2AF1Q16633 256 aa20.78■□□□□ 0.92
SDCCAG3-201ENST00000298537 LDLRAD2Q5SZI1 272 aa20.78■□□□□ 0.92
SDCCAG3-201ENST00000298537 ZNF429Q86V71 674 aa20.78■□□□□ 0.92
SDCCAG3-201ENST00000298537 LYPD6BQ8NI32 183 aa20.78■□□□□ 0.92
SDCCAG3-201ENST00000298537 HINT2Q9BX68 163 aa20.78■□□□□ 0.92
SDCCAG3-201ENST00000298537 HEYLQ9NQ87 328 aaPredicted RBP20.78■□□□□ 0.92
SDCCAG3-201ENST00000298537 PRELID1Q9Y255 219 aa20.78■□□□□ 0.92
SDCCAG3-201ENST00000298537 EIF3GO75821 320 aaKnown RBP eCLIP20.78■□□□□ 0.92
SDCCAG3-201ENST00000298537 PAX6P26367 422 aa20.78■□□□□ 0.92
SDCCAG3-201ENST00000298537 GPR6P46095 362 aaPredicted RBP20.78■□□□□ 0.92
SDCCAG3-201ENST00000298537 TGIF2LXQ8IUE1 241 aa20.78■□□□□ 0.92
SDCCAG3-201ENST00000298537 CCDC28AQ8IWP9 274 aa20.78■□□□□ 0.92
SDCCAG3-201ENST00000298537 RAB19A4D1S5 217 aa20.77■□□□□ 0.92
SDCCAG3-201ENST00000298537 C9JQL5 133 aa20.77■□□□□ 0.92
SDCCAG3-201ENST00000298537 ARG1P05089 322 aa20.77■□□□□ 0.92
SDCCAG3-201ENST00000298537 F2RL1P55085 397 aa20.77■□□□□ 0.92
SDCCAG3-201ENST00000298537 LRRC75BQ2VPJ9 315 aa20.77■□□□□ 0.92
SDCCAG3-201ENST00000298537 ZNF843Q8N446 348 aa20.77■□□□□ 0.92
SDCCAG3-201ENST00000298537 CIB3Q96Q77 187 aaPredicted RBP20.77■□□□□ 0.92
SDCCAG3-201ENST00000298537 SSBP3Q9BWW4 388 aaPredicted RBP20.77■□□□□ 0.92
SDCCAG3-201ENST00000298537 WDR61Q9GZS3 305 aaKnown RBP20.77■□□□□ 0.92
SDCCAG3-201ENST00000298537 FOXA2Q9Y261 457 aaPredicted RBP20.77■□□□□ 0.92
SDCCAG3-201ENST00000298537 SPG11Q96JI7 2443 aa20.77■□□□□ 0.92
SDCCAG3-201ENST00000298537 APOA2P02652 100 aa20.77■□□□□ 0.92
SDCCAG3-201ENST00000298537 ADCYAP1P18509 176 aa20.77■□□□□ 0.92
SDCCAG3-201ENST00000298537 ZFP36P26651 326 aaKnown RBP20.77■□□□□ 0.92
SDCCAG3-201ENST00000298537 ZNF137PP52743 207 aa20.77■□□□□ 0.92
SDCCAG3-201ENST00000298537 HLA-DRB5Q30154 266 aa20.77■□□□□ 0.92
SDCCAG3-201ENST00000298537 PNKDQ8N490 385 aa20.77■□□□□ 0.92
SDCCAG3-201ENST00000298537 OR52E5Q8NH55 327 aa20.77■□□□□ 0.92
SDCCAG3-201ENST00000298537 UPK2O00526 184 aa20.76■□□□□ 0.91
SDCCAG3-201ENST00000298537 GPR37O15354 613 aa20.76■□□□□ 0.91
SDCCAG3-201ENST00000298537 IFNA10P01566 189 aa20.76■□□□□ 0.91
SDCCAG3-201ENST00000298537 HOXA1P49639 335 aaPredicted RBP20.76■□□□□ 0.91
SDCCAG3-201ENST00000298537 CCL20P78556 96 aa20.76■□□□□ 0.91
SDCCAG3-201ENST00000298537 GNPNAT1Q96EK6 184 aaPredicted RBP20.76■□□□□ 0.91
SDCCAG3-201ENST00000298537 OR51B2Q9Y5P1 312 aa20.76■□□□□ 0.91
SDCCAG3-201ENST00000298537 LIPFP07098 398 aa20.76■□□□□ 0.91
SDCCAG3-201ENST00000298537 KLRD1Q13241 179 aa20.76■□□□□ 0.91
SDCCAG3-201ENST00000298537 OR10P1Q8NGE3 313 aa20.76■□□□□ 0.91
SDCCAG3-201ENST00000298537 SCGB1C1Q8TD33 95 aa20.76■□□□□ 0.91
SDCCAG3-201ENST00000298537 LHX4Q969G2 390 aa20.76■□□□□ 0.91
SDCCAG3-201ENST00000298537 KRBOX1C9JBD0 128 aa20.75■□□□□ 0.91
SDCCAG3-201ENST00000298537 EFNA4P52798 201 aa20.75■□□□□ 0.91
SDCCAG3-201ENST00000298537 PDLIM3Q53GG5 364 aaPredicted RBP20.75■□□□□ 0.91
SDCCAG3-201ENST00000298537 DHRS7BQ6IAN0 325 aaPredicted RBP20.75■□□□□ 0.91
SDCCAG3-201ENST00000298537 IL34Q6ZMJ4 242 aa20.75■□□□□ 0.91
SDCCAG3-201ENST00000298537 OR4P4Q8NGL7 312 aa20.75■□□□□ 0.91
SDCCAG3-201ENST00000298537 FLYWCH2Q96CP2 140 aaKnown RBP20.75■□□□□ 0.91
SDCCAG3-201ENST00000298537 CLEC7AQ9BXN2 247 aa20.75■□□□□ 0.91
SDCCAG3-201ENST00000298537 E7EUB6 86 aa20.75■□□□□ 0.91
SDCCAG3-201ENST00000298537 PLXNB1O43157 2135 aa20.75■□□□□ 0.91
SDCCAG3-201ENST00000298537 HSPE1P61604 102 aaKnown RBP20.75■□□□□ 0.91
SDCCAG3-201ENST00000298537 TREM1Q9NP99 234 aa20.75■□□□□ 0.91
SDCCAG3-201ENST00000298537 TPSG1Q9NRR2 321 aa20.75■□□□□ 0.91
SDCCAG3-201ENST00000298537 LOC105371242A0A075B767 164 aa20.74■□□□□ 0.91
SDCCAG3-201ENST00000298537 TSPAN15O95858 294 aa20.74■□□□□ 0.91
SDCCAG3-201ENST00000298537 TMEM177Q53S58 311 aa20.74■□□□□ 0.91
SDCCAG3-201ENST00000298537 TAF15Q92804 592 aaKnown RBP eCLIP20.74■□□□□ 0.91
SDCCAG3-201ENST00000298537 WNK2Q9Y3S1 2297 aa20.74■□□□□ 0.91
SDCCAG3-201ENST00000298537 A0A1W2PRD5 423 aa20.73■□□□□ 0.91
SDCCAG3-201ENST00000298537 A0A1W2PRF3 423 aa20.73■□□□□ 0.91
SDCCAG3-201ENST00000298537 A0A1W2PRM7 423 aa20.73■□□□□ 0.91
SDCCAG3-201ENST00000298537 BUB1B-PAK6H3BSN5 160 aa20.73■□□□□ 0.91
SDCCAG3-201ENST00000298537 APOC3P02656 99 aa20.73■□□□□ 0.91
SDCCAG3-201ENST00000298537 PUSL1Q8N0Z8 303 aaKnown RBP20.73■□□□□ 0.91
SDCCAG3-201ENST00000298537 MAP1AP78559 2803 aaPredicted RBP20.73■□□□□ 0.91
SDCCAG3-201ENST00000298537 IGLV2-23P01705 113 aa20.73■□□□□ 0.91
SDCCAG3-201ENST00000298537 RAB5CP51148 216 aa20.73■□□□□ 0.91
SDCCAG3-201ENST00000298537 ATRAIDQ6UW56 229 aa20.73■□□□□ 0.91
SDCCAG3-201ENST00000298537 OSR1Q8TAX0 266 aaPredicted RBP20.73■□□□□ 0.91
SDCCAG3-201ENST00000298537 BPESC1Q9GZL8 116 aa20.73■□□□□ 0.91
SDCCAG3-201ENST00000298537 TEX50A0A1B0GTY4 177 aa20.72■□□□□ 0.91
SDCCAG3-201ENST00000298537 TMEM218A2RU14 115 aa20.72■□□□□ 0.91
SDCCAG3-201ENST00000298537 OVOL3O00110 214 aa20.72■□□□□ 0.91
SDCCAG3-201ENST00000298537 ENSAO43768 121 aaKnown RBP20.72■□□□□ 0.91
SDCCAG3-201ENST00000298537 CNTFRP26992 372 aa20.72■□□□□ 0.91
SDCCAG3-201ENST00000298537 ELLP55199 621 aaPredicted RBP20.72■□□□□ 0.91
SDCCAG3-201ENST00000298537 FAM71F2Q6NXP2 309 aa20.72■□□□□ 0.91
SDCCAG3-201ENST00000298537 SSX7Q7RTT5 188 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms