RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 CD99P14209 185 aa12.51□□□□□ -0.41
SPIDR-201ENST00000297423 PLA2G2CQ5R387 149 aa12.51□□□□□ -0.41
SPIDR-201ENST00000297423 C20orf144Q9BQM9 153 aa12.51□□□□□ -0.41
SPIDR-201ENST00000297423 PLSCR2Q9NRY7 297 aa12.51□□□□□ -0.41
SPIDR-201ENST00000297423 PSG11Q9UQ72 335 aa12.51□□□□□ -0.41
SPIDR-201ENST00000297423 hCG_38984A0A1B0GV85 526 aa12.5□□□□□ -0.41
SPIDR-201ENST00000297423 HSBP1L1C9JCN9 74 aa12.5□□□□□ -0.41
SPIDR-201ENST00000297423 CDX4O14627 284 aaPredicted RBP12.5□□□□□ -0.41
SPIDR-201ENST00000297423 HYPMO75409 117 aa12.5□□□□□ -0.41
SPIDR-201ENST00000297423 CD1BP29016 333 aa12.5□□□□□ -0.41
SPIDR-201ENST00000297423 KLF3P57682 345 aaPredicted RBP12.5□□□□□ -0.41
SPIDR-201ENST00000297423 HOXA4Q00056 320 aaPredicted RBP12.5□□□□□ -0.41
SPIDR-201ENST00000297423 TRIP6Q15654 476 aaKnown RBP12.5□□□□□ -0.41
SPIDR-201ENST00000297423 SPOCK3Q9BQ16 436 aa12.5□□□□□ -0.41
SPIDR-201ENST00000297423 ENY2Q9NPA8 101 aa12.5□□□□□ -0.41
SPIDR-201ENST00000297423 DLL3Q9NYJ7 618 aa12.5□□□□□ -0.41
SPIDR-201ENST00000297423 USF1P22415 310 aaPredicted RBP12.5□□□□□ -0.41
SPIDR-201ENST00000297423 CRYBB3P26998 211 aa12.5□□□□□ -0.41
SPIDR-201ENST00000297423 NANOS1Q8WY41 292 aaKnown RBP12.5□□□□□ -0.41
SPIDR-201ENST00000297423 PMCHL2Q9BQD1 86 aa12.5□□□□□ -0.41
SPIDR-201ENST00000297423 FREM2Q5SZK8 3169 aa12.5□□□□□ -0.41
SPIDR-201ENST00000297423 TNFSF15O95150 251 aa12.5□□□□□ -0.41
SPIDR-201ENST00000297423 PSG5Q15238 335 aa12.5□□□□□ -0.41
SPIDR-201ENST00000297423 TRAT1Q6PIZ9 186 aa12.5□□□□□ -0.41
SPIDR-201ENST00000297423 GNG12Q9UBI6 72 aa12.5□□□□□ -0.41
SPIDR-201ENST00000297423 SPG11Q96JI7 2443 aa12.5□□□□□ -0.41
SPIDR-201ENST00000297423 ARFGEF3Q5TH69 2177 aa12.5□□□□□ -0.41
SPIDR-201ENST00000297423 RNF212BA8MTL3 300 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 VENTXO95231 258 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 TIMP3P35625 211 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 UQCRFS1P47985 274 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 FABP6P51161 128 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 PMCHL1Q16048 86 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 S100A7AQ86SG5 101 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 LYG1Q8N1E2 194 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 ABHD12Q8N2K0 398 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 NAA38Q9BRA0 125 aaKnown RBP12.49□□□□□ -0.41
SPIDR-201ENST00000297423 C11orf1Q9H5F2 150 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 KIAA1549Q9HCM3 1950 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 FAM166BA8MTA8 275 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 CDIPTO14735 213 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 KLF7O75840 302 aaPredicted RBP12.49□□□□□ -0.41
SPIDR-201ENST00000297423 CLDN14O95500 239 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 C3orf79P0CE67 100 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 COX6A1P12074 109 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 NUDT3O95989 172 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 CSN3P07498 182 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 SSPNQ14714 243 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 ACSF3Q4G176 576 aaPredicted RBP12.49□□□□□ -0.41
SPIDR-201ENST00000297423 GCNT2Q8N0V5 402 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 RCHY1Q96PM5 261 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 ABI3Q9P2A4 366 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 RNF114Q9Y508 228 aa12.49□□□□□ -0.41
SPIDR-201ENST00000297423 ETV2O00321 342 aaPredicted RBP12.48□□□□□ -0.41
SPIDR-201ENST00000297423 PDLIM4P50479 330 aa12.48□□□□□ -0.41
SPIDR-201ENST00000297423 RPL15P61313 204 aaKnown RBP12.48□□□□□ -0.41
SPIDR-201ENST00000297423 GABRA6Q16445 453 aa12.48□□□□□ -0.41
SPIDR-201ENST00000297423 KCNMB1Q16558 191 aa12.48□□□□□ -0.41
SPIDR-201ENST00000297423 ZNF841Q6ZN19 808 aa12.48□□□□□ -0.41
SPIDR-201ENST00000297423 C1orf174Q8IYL3 243 aa12.48□□□□□ -0.41
SPIDR-201ENST00000297423 OR10D3Q8NH80 312 aa12.48□□□□□ -0.41
SPIDR-201ENST00000297423 FAM216AQ8WUB2 273 aa12.48□□□□□ -0.41
SPIDR-201ENST00000297423 LOC102723996A0A087X1L8 192 aa12.48□□□□□ -0.41
SPIDR-201ENST00000297423 MT-CO2P00403 227 aa12.48□□□□□ -0.41
SPIDR-201ENST00000297423 TNFSF4P23510 183 aa12.48□□□□□ -0.41
SPIDR-201ENST00000297423 UBE2V1Q13404 147 aa12.48□□□□□ -0.41
SPIDR-201ENST00000297423 OBP2BQ9NPH6 170 aa12.48□□□□□ -0.41
SPIDR-201ENST00000297423 PIGBOS1A0A0B4J2F0 54 aa12.48□□□□□ -0.41
SPIDR-201ENST00000297423 C17orf98A8MV24 154 aa12.48□□□□□ -0.41
SPIDR-201ENST00000297423 PSG1P11464 419 aa12.48□□□□□ -0.41
SPIDR-201ENST00000297423 MFAP2P55001 183 aa12.48□□□□□ -0.41
SPIDR-201ENST00000297423 GFRA1P56159 465 aa12.48□□□□□ -0.41
SPIDR-201ENST00000297423 AESQ08117 197 aa12.48□□□□□ -0.41
SPIDR-201ENST00000297423 DEFB124Q8NES8 71 aa12.48□□□□□ -0.41
SPIDR-201ENST00000297423 BCL2L2Q92843 193 aaPredicted RBP12.48□□□□□ -0.41
SPIDR-201ENST00000297423 HELTA6NFD8 242 aa12.47□□□□□ -0.41
SPIDR-201ENST00000297423 PRB4P10163 310 aaPredicted RBP12.47□□□□□ -0.41
SPIDR-201ENST00000297423 FOXA3P55318 350 aaPredicted RBP12.47□□□□□ -0.41
SPIDR-201ENST00000297423 OR2T6Q8NHC8 308 aa12.47□□□□□ -0.41
SPIDR-201ENST00000297423 SSBP4Q9BWG4 385 aaPredicted RBP12.47□□□□□ -0.41
SPIDR-201ENST00000297423 GAL3ST2Q9H3Q3 398 aa12.47□□□□□ -0.41
SPIDR-201ENST00000297423 COL6A3P12111 3177 aa12.47□□□□□ -0.41
SPIDR-201ENST00000297423 FBLL1A6NHQ2 334 aaKnown RBP12.47□□□□□ -0.41
SPIDR-201ENST00000297423 CTSSP25774 331 aa12.47□□□□□ -0.41
SPIDR-201ENST00000297423 SPATA31B1PQ5VZV4 182 aa12.47□□□□□ -0.41
SPIDR-201ENST00000297423 HSD17B10Q99714 261 aaKnown RBP12.47□□□□□ -0.41
SPIDR-201ENST00000297423 AGMATQ9BSE5 352 aa12.47□□□□□ -0.41
SPIDR-201ENST00000297423 CLEC5AQ9NY25 188 aa12.47□□□□□ -0.41
SPIDR-201ENST00000297423 GPX1P07203 203 aa12.47□□□□□ -0.41
SPIDR-201ENST00000297423 HIST3H3Q16695 136 aa12.47□□□□□ -0.41
SPIDR-201ENST00000297423 Q5PR19 223 aa12.47□□□□□ -0.41
SPIDR-201ENST00000297423 TEX43Q6ZNM6 134 aa12.47□□□□□ -0.41
SPIDR-201ENST00000297423 ZNF295-AS1Q8N0V1 137 aa12.47□□□□□ -0.41
SPIDR-201ENST00000297423 GALMQ96C23 342 aa12.47□□□□□ -0.41
SPIDR-201ENST00000297423 IMMP1LQ96LU5 166 aa12.47□□□□□ -0.41
SPIDR-201ENST00000297423 FRYQ5TBA9 3013 aa12.47□□□□□ -0.41
SPIDR-201ENST00000297423 NKX6-3A6NJ46 265 aa12.46□□□□□ -0.41
SPIDR-201ENST00000297423 CGAP01215 116 aa12.46□□□□□ -0.41
SPIDR-201ENST00000297423 APCSP02743 223 aa12.46□□□□□ -0.41
SPIDR-201ENST00000297423 FOXG1P55316 489 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms