RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 IFNA10P01566 189 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 TMEM155Q4W5P6 130 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 PDLIM3Q53GG5 364 aaPredicted RBP7.47□□□□□ -1.21
PDPN-201ENST00000294489 OR10X1Q8NGY0 326 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 KIAA1456Q9P272 454 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 TIMM9Q9Y5J7 89 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 SMG1Q96Q15 3661 aaKnown RBP7.47□□□□□ -1.21
PDPN-201ENST00000294489 PKDREJQ9NTG1 2253 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 C15orf61A6NNL5 157 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 PMS2P5A8MQ11 134 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 FAM157AC9JC47 383 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 APOA2P02652 100 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 CT45A6P0DMU7 189 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 CT45A5P0DMU8 189 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 CT45A7P0DMV0 189 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 ERVFRD-1P60508 538 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 POU2AF1Q16633 256 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 OR4A47Q6IF82 309 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 SPSB3Q6PJ21 355 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 ZNF833PQ6ZTB9 187 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 C11orf42Q8N5U0 333 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 LINC00311Q8N616 119 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 USP24Q9UPU5 2620 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 NUPL2O15504 423 aaKnown RBP7.47□□□□□ -1.21
PDPN-201ENST00000294489 S100A6P06703 90 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 HOXA1P49639 335 aaPredicted RBP7.47□□□□□ -1.21
PDPN-201ENST00000294489 OR13D1Q8NGV5 346 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 SLC35B3Q9H1N7 401 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 ENY2Q9NPA8 101 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 RPRMQ9NS64 109 aa7.47□□□□□ -1.21
PDPN-201ENST00000294489 ANKHD1Q8IWZ3 2542 aaKnown RBP7.46□□□□□ -1.21
PDPN-201ENST00000294489 DIDO1Q9BTC0 2240 aaKnown RBP7.46□□□□□ -1.21
PDPN-201ENST00000294489 TRAV3A0A0B4J244 114 aa7.46□□□□□ -1.21
PDPN-201ENST00000294489 TRAV1-1A0A0B4J248 108 aa7.46□□□□□ -1.21
PDPN-201ENST00000294489 RBFOX3A6NFN3 312 aa7.46□□□□□ -1.21
PDPN-201ENST00000294489 C15orf62A8K5M9 175 aa7.46□□□□□ -1.21
PDPN-201ENST00000294489 RBP4P02753 201 aa7.46□□□□□ -1.21
PDPN-201ENST00000294489 TMEM41BQ5BJD5 291 aa7.46□□□□□ -1.21
PDPN-201ENST00000294489 ZNF843Q8N446 348 aa7.46□□□□□ -1.21
PDPN-201ENST00000294489 ZNF709Q8N972 641 aa7.46□□□□□ -1.21
PDPN-201ENST00000294489 LY6G5BQ8NDX9 201 aa7.46□□□□□ -1.21
PDPN-201ENST00000294489 TMEM186Q96B77 213 aa7.46□□□□□ -1.21
PDPN-201ENST00000294489 SCRT1Q9BWW7 348 aa7.46□□□□□ -1.21
PDPN-201ENST00000294489 RALYQ9UKM9 306 aaKnown RBP7.46□□□□□ -1.21
PDPN-201ENST00000294489 PRNDQ9UKY0 176 aa7.46□□□□□ -1.21
PDPN-201ENST00000294489 TCF19Q9Y242 345 aa7.46□□□□□ -1.21
PDPN-201ENST00000294489 FOXA2Q9Y261 457 aaPredicted RBP7.46□□□□□ -1.21
PDPN-201ENST00000294489 KLF2Q9Y5W3 355 aaPredicted RBP7.46□□□□□ -1.21
PDPN-201ENST00000294489 LOC105371267A0A1B0GV96 52 aa7.46□□□□□ -1.22
PDPN-201ENST00000294489 OVOL3O00110 214 aa7.46□□□□□ -1.22
PDPN-201ENST00000294489 DNASE2O00115 360 aaPredicted RBP7.46□□□□□ -1.22
PDPN-201ENST00000294489 F12P00748 615 aaPredicted RBP7.46□□□□□ -1.22
PDPN-201ENST00000294489 ARG1P05089 322 aa7.46□□□□□ -1.22
PDPN-201ENST00000294489 FGF7P21781 194 aa7.46□□□□□ -1.22
PDPN-201ENST00000294489 HSPE1P61604 102 aaKnown RBP7.46□□□□□ -1.22
PDPN-201ENST00000294489 RAB11AP62491 216 aa7.46□□□□□ -1.22
PDPN-201ENST00000294489 CCL20P78556 96 aa7.46□□□□□ -1.22
PDPN-201ENST00000294489 FAM71F2Q6NXP2 309 aa7.46□□□□□ -1.22
PDPN-201ENST00000294489 CENPVQ7Z7K6 275 aaPredicted RBP7.46□□□□□ -1.22
PDPN-201ENST00000294489 TMEM14BQ9NUH8 114 aa7.46□□□□□ -1.22
PDPN-201ENST00000294489 ZNRD1Q9P1U0 126 aa7.46□□□□□ -1.22
PDPN-201ENST00000294489 COL6A6A6NMZ7 2263 aa7.46□□□□□ -1.22
PDPN-201ENST00000294489 A0A1W2PPH5 198 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 C17orf112F2Z3M2 114 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 LYNX1G3V0Z9 82 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 H7C2Y5 167 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 J3QR06 171 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 MBP02144 154 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 LYNX1P0DP58 116 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 VDAC2P45880 294 aaPredicted RBP7.45□□□□□ -1.22
PDPN-201ENST00000294489 ZNF137PP52743 207 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 RPS16P62249 146 aaKnown RBP7.45□□□□□ -1.22
PDPN-201ENST00000294489 VWC2Q2TAL6 325 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 OR9G1Q8NH87 305 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 OSR1Q8TAX0 266 aaPredicted RBP7.45□□□□□ -1.22
PDPN-201ENST00000294489 CHODLQ9H9P2 273 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 UNKLQ9H9P5 680 aaKnown RBP7.45□□□□□ -1.22
PDPN-201ENST00000294489 MIOXQ9UGB7 285 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 IGKV1-16P04430 117 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 ELLP55199 621 aaPredicted RBP7.45□□□□□ -1.22
PDPN-201ENST00000294489 ETV3LQ6ZN32 361 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 GGACTQ9BVM4 153 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 MRPL20Q9BYC9 149 aaKnown RBP7.45□□□□□ -1.22
PDPN-201ENST00000294489 FAM74A7A6NL05 159 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 IGHV1-8P0DP01 117 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 IL3RAP26951 378 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 CD1BP29016 333 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 FAM74A3Q4VXF1 159 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 ZNF787Q6DD87 383 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 CLRN3Q8NCR9 226 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 MBD3L1Q8WWY6 194 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 RARRES2Q99969 163 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 VSIRQ9H7M9 311 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 FKBP11Q9NYL4 201 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 OR51B2Q9Y5P1 312 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 CFAP46Q8IYW2 2715 aa7.45□□□□□ -1.22
PDPN-201ENST00000294489 UPK2O00526 184 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 IFNA4P05014 189 aa7.44□□□□□ -1.22
PDPN-201ENST00000294489 IL6RP08887 468 aaPredicted RBP7.44□□□□□ -1.22
PDPN-201ENST00000294489 NPBWR1P48145 328 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms