RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CASP8AP2Q9UKL3 1982 aa10.84□□□□□ -0.67
PTCD1-201ENST00000292478 CKS2P33552 79 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 LHX2P50458 406 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 CYP2G1PQ6ZSU1 146 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 CCDC88CQ9P219 2028 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 CIDEAO60543 219 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 CFHR1Q03591 330 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 ZFP36L1Q07352 338 aaKnown RBP10.83□□□□□ -0.68
PTCD1-201ENST00000292478 GUCD1Q96NT3 240 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 TGIF2-C20orf24A0A0A6YYL0 155 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 KBTBD11-OT1A0A1B0GTJ5 212 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 CRYBB3P26998 211 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 ARF6P62330 175 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 TMEM177Q53S58 311 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 LAMTOR1Q6IAA8 161 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 NPCDR1Q9BY65 106 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 PRDM6Q9NQX0 595 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 CA2P00918 260 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 FXYD3Q14802 87 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 RNFT1Q5M7Z0 435 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 SFRP2Q96HF1 295 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 ELOVL1Q9BW60 279 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 IFI27L2Q9H2X8 130 aa10.83□□□□□ -0.68
PTCD1-201ENST00000292478 MTCL1Q9Y4B5 1905 aaKnown RBP10.83□□□□□ -0.68
PTCD1-201ENST00000292478 IGHV1-2P23083 117 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 EFNB1P98172 346 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 PNKDQ8N490 385 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 LEAP2Q969E1 77 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 SLC25A28Q96A46 364 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 IL6RP08887 468 aaPredicted RBP10.82□□□□□ -0.68
PTCD1-201ENST00000292478 CDX1P47902 265 aaPredicted RBP10.82□□□□□ -0.68
PTCD1-201ENST00000292478 RELBQ01201 579 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 COL5A1-AS1Q5SY13 56 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 FAM89BQ8N5H3 189 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 ZNRF1Q8ND25 227 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 NPIPB3Q92617 1050 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 A0A0G2JMM0 328 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 A0A1W2PPB8 328 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 A0A1W2PRS3 328 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 C5orf52A6NGY3 159 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 KIR3DP1A8MWS1 328 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 PLAUP00749 431 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 ACSF3Q4G176 576 aaPredicted RBP10.82□□□□□ -0.68
PTCD1-201ENST00000292478 SAPCD1Q5SSQ6 148 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 MAP1LC3AQ9H492 121 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 AKIRIN1Q9H9L7 192 aaPredicted RBP10.82□□□□□ -0.68
PTCD1-201ENST00000292478 NYNRINQ9P2P1 1898 aaKnown RBP10.82□□□□□ -0.68
PTCD1-201ENST00000292478 PIKFYVEQ9Y2I7 2098 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 TRBV6-7A0A0A0MS04 114 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 PSG7Q13046 419 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 GFRA3O60609 400 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 NAT1P18440 290 aa10.82□□□□□ -0.68
PTCD1-201ENST00000292478 RCC1LQ96I51 464 aaKnown RBP10.82□□□□□ -0.68
PTCD1-201ENST00000292478 CACNG8Q8WXS5 425 aa10.81□□□□□ -0.68
PTCD1-201ENST00000292478 RPRMQ9NS64 109 aa10.81□□□□□ -0.68
PTCD1-201ENST00000292478 LINC00312Q9Y6C7 94 aa10.81□□□□□ -0.68
PTCD1-201ENST00000292478 ICE1Q9Y2F5 2266 aa10.81□□□□□ -0.68
PTCD1-201ENST00000292478 NPIPB6E9PJ23 425 aa10.81□□□□□ -0.68
PTCD1-201ENST00000292478 MDKP21741 143 aaPredicted RBP10.81□□□□□ -0.68
PTCD1-201ENST00000292478 ANOS1P23352 680 aa10.81□□□□□ -0.68
PTCD1-201ENST00000292478 LCN2P80188 198 aa10.81□□□□□ -0.68
PTCD1-201ENST00000292478 RPL39P5Q59GN2 51 aa10.81□□□□□ -0.68
PTCD1-201ENST00000292478 WBP1Q96G27 269 aa10.81□□□□□ -0.68
PTCD1-201ENST00000292478 SEC16AO15027 2179 aa10.81□□□□□ -0.68
PTCD1-201ENST00000292478 GPX4P36969 197 aaPredicted RBP10.81□□□□□ -0.68
PTCD1-201ENST00000292478 VKORC1L1Q8N0U8 176 aa10.81□□□□□ -0.68
PTCD1-201ENST00000292478 C18orf12Q96KH6 178 aa10.81□□□□□ -0.68
PTCD1-201ENST00000292478 LOC389332A0A1B0GUA5 103 aa10.81□□□□□ -0.68
PTCD1-201ENST00000292478 LEPROTL1O95214 131 aa10.81□□□□□ -0.68
PTCD1-201ENST00000292478 HTN1P15515 57 aa10.81□□□□□ -0.68
PTCD1-201ENST00000292478 NPPCP23582 126 aa10.81□□□□□ -0.68
PTCD1-201ENST00000292478 TSPOP30536 169 aa10.81□□□□□ -0.68
PTCD1-201ENST00000292478 SRSF7Q16629 238 aaKnown RBP eCLIP10.81□□□□□ -0.68
PTCD1-201ENST00000292478 TMEM238LA0A1B0GVL6 79 aa10.8□□□□□ -0.68
PTCD1-201ENST00000292478 A6NJY4 79 aa10.8□□□□□ -0.68
PTCD1-201ENST00000292478 BTCP35070 178 aa10.8□□□□□ -0.68
PTCD1-201ENST00000292478 TCF24Q7RTU0 167 aa10.8□□□□□ -0.68
PTCD1-201ENST00000292478 C17orf82Q86X59 251 aaPredicted RBP10.8□□□□□ -0.68
PTCD1-201ENST00000292478 RNASEH2CQ8TDP1 164 aaKnown RBP10.8□□□□□ -0.68
PTCD1-201ENST00000292478 PGLYRP4Q96LB8 373 aa10.8□□□□□ -0.68
PTCD1-201ENST00000292478 DPM3Q9P2X0 92 aa10.8□□□□□ -0.68
PTCD1-201ENST00000292478 A8MXK9 166 aa10.8□□□□□ -0.68
PTCD1-201ENST00000292478 NTN3O00634 580 aaPredicted RBP10.8□□□□□ -0.68
PTCD1-201ENST00000292478 OR13A1Q8NGR1 328 aa10.8□□□□□ -0.68
PTCD1-201ENST00000292478 TRAV9-1A0A075B6T8 112 aa10.8□□□□□ -0.68
PTCD1-201ENST00000292478 RNF222A6NCQ9 220 aa10.8□□□□□ -0.68
PTCD1-201ENST00000292478 CX3CL1P78423 397 aa10.8□□□□□ -0.68
PTCD1-201ENST00000292478 NR2C2APQ86WQ0 139 aa10.8□□□□□ -0.68
PTCD1-201ENST00000292478 MYOFQ9NZM1 2061 aa10.8□□□□□ -0.68
PTCD1-201ENST00000292478 MSGN1A6NI15 193 aa10.8□□□□□ -0.68
PTCD1-201ENST00000292478 TRGC1P0CF51 173 aa10.8□□□□□ -0.68
PTCD1-201ENST00000292478 OR4A47Q6IF82 309 aa10.8□□□□□ -0.68
PTCD1-201ENST00000292478 FOLR2P14207 255 aa10.79□□□□□ -0.68
PTCD1-201ENST00000292478 CSRP1P21291 193 aaKnown RBP10.79□□□□□ -0.68
PTCD1-201ENST00000292478 FHITP49789 147 aa10.79□□□□□ -0.68
PTCD1-201ENST00000292478 ZNF841Q6ZN19 808 aa10.79□□□□□ -0.68
PTCD1-201ENST00000292478 SRSF12Q8WXF0 261 aaKnown RBP10.79□□□□□ -0.68
PTCD1-201ENST00000292478 TMEM70Q9BUB7 260 aa10.79□□□□□ -0.68
PTCD1-201ENST00000292478 YPEL1O60688 119 aa10.79□□□□□ -0.68
PTCD1-201ENST00000292478 FAM27E3Q08E93 113 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms