RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 GNB1P62873 340 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 CHD3Q12873 2000 aaKnown RBP8.67□□□□□ -1.02
SKA1-201ENST00000285116 CATR1Q13166 79 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 TBC1D28Q2M2D7 210 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 TCF23Q7RTU1 214 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 TMEM251Q8N6I4 163 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 TXNDC17Q9BRA2 123 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 GAL3ST2Q9H3Q3 398 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 PTPRQQ9UMZ3 2332 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 PTPRBP23467 1997 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 TRAV9-1A0A075B6T8 112 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 C20orf202A1L168 122 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 F6UZH7 168 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 C1QTNF9P0C862 333 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 MAGEA5P43359 124 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 PDLIM3Q53GG5 364 aaPredicted RBP8.67□□□□□ -1.02
SKA1-201ENST00000285116 C9orf135Q5VTT2 229 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 ZNF709Q8N972 641 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 GMPPAQ96IJ6 420 aaPredicted RBP8.67□□□□□ -1.02
SKA1-201ENST00000285116 KCNIP2Q9NS61 270 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 FOXJ2Q9P0K8 574 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 KCNS2Q9ULS6 477 aa8.67□□□□□ -1.02
SKA1-201ENST00000285116 OOEPA6NGQ2 149 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 SMPD2O60906 423 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 KITLGP21583 273 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 PLA2G5P39877 138 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 COMPP49747 757 aaPredicted RBP8.66□□□□□ -1.02
SKA1-201ENST00000285116 PMP22Q01453 160 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 TCF15Q12870 199 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 MRPL49Q13405 166 aaKnown RBP8.66□□□□□ -1.02
SKA1-201ENST00000285116 OR1C1Q15619 314 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 MDP1Q86V88 176 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 TAAR6Q96RI8 345 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 TUBG2Q9NRH3 451 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 SLC45A2Q9UMX9 530 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 FREM1Q5H8C1 2179 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 C17orf112F2Z3M2 114 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 SIRPB1O00241 398 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 ITGB1BP1O14713 200 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 NDUFB4O95168 129 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 CDC34P49427 236 aaPredicted RBP8.66□□□□□ -1.02
SKA1-201ENST00000285116 SRYQ05066 204 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 MYPOPQ86VE0 399 aaPredicted RBP8.66□□□□□ -1.02
SKA1-201ENST00000285116 MDS2Q8NDY4 140 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 OR10P1Q8NGE3 313 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 ORAOV1Q8WV07 137 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 C22orf15Q8WYQ4 148 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 GALMQ96C23 342 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 C5orf30Q96GV9 206 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 RNF2Q99496 336 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 NPCDR1Q9BY65 106 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 SAMD10Q9BYL1 202 aa8.66□□□□□ -1.02
SKA1-201ENST00000285116 KLF13Q9Y2Y9 288 aaPredicted RBP8.66□□□□□ -1.02
SKA1-201ENST00000285116 KIAA2026Q5HYC2 2103 aa8.65□□□□□ -1.02
SKA1-201ENST00000285116 ODAMA1E959 279 aa8.65□□□□□ -1.02
SKA1-201ENST00000285116 WDR1O75083 606 aa8.65□□□□□ -1.02
SKA1-201ENST00000285116 MMP23AO75900 390 aa8.65□□□□□ -1.02
SKA1-201ENST00000285116 RBX1P62877 108 aa8.65□□□□□ -1.02
SKA1-201ENST00000285116 Q0VG73 95 aa8.65□□□□□ -1.02
SKA1-201ENST00000285116 BAGE3Q86Y29 109 aa8.65□□□□□ -1.02
SKA1-201ENST00000285116 BAGE2Q86Y30 109 aa8.65□□□□□ -1.02
SKA1-201ENST00000285116 MCEMP1Q8IX19 187 aa8.65□□□□□ -1.02
SKA1-201ENST00000285116 MPDU1O75352 247 aa8.65□□□□□ -1.03
SKA1-201ENST00000285116 HAND1O96004 215 aa8.65□□□□□ -1.03
SKA1-201ENST00000285116 EGR1P18146 543 aa8.65□□□□□ -1.03
SKA1-201ENST00000285116 KLF3P57682 345 aaPredicted RBP8.65□□□□□ -1.03
SKA1-201ENST00000285116 BRWD1-AS2P59051 145 aa8.65□□□□□ -1.03
SKA1-201ENST00000285116 LEMD1Q68G75 181 aa8.65□□□□□ -1.03
SKA1-201ENST00000285116 TRAT1Q6PIZ9 186 aa8.65□□□□□ -1.03
SKA1-201ENST00000285116 Q8N7P7 452 aa8.65□□□□□ -1.03
SKA1-201ENST00000285116 PRSS33Q8NF86 280 aa8.65□□□□□ -1.03
SKA1-201ENST00000285116 MRPL18Q9H0U6 180 aaKnown RBP8.65□□□□□ -1.03
SKA1-201ENST00000285116 ZNF586Q9NXT0 402 aa8.65□□□□□ -1.03
SKA1-201ENST00000285116 UQCR10Q9UDW1 63 aa8.65□□□□□ -1.03
SKA1-201ENST00000285116 RALYQ9UKM9 306 aaKnown RBP8.65□□□□□ -1.03
SKA1-201ENST00000285116 RBM7Q9Y580 266 aaKnown RBP8.65□□□□□ -1.03
SKA1-201ENST00000285116 UTP20O75691 2785 aaKnown RBP8.65□□□□□ -1.03
SKA1-201ENST00000285116 TRAV39A0A0B4J263 110 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 RBFOX2O43251 390 aaKnown RBP eCLIP8.64□□□□□ -1.03
SKA1-201ENST00000285116 TNFSF15O95150 251 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 NXPH2O95156 264 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 CRYAAP02489 173 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 CTRLP40313 264 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 SUMO1P63165 101 aaKnown RBP8.64□□□□□ -1.03
SKA1-201ENST00000285116 MMDQ15546 238 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 SIGLECL1Q8N7X8 197 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 OR10G8Q8NGN5 311 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 HSD17B10Q99714 261 aaKnown RBP8.64□□□□□ -1.03
SKA1-201ENST00000285116 WDR83OSQ9Y284 106 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 MYO18BQ8IUG5 2567 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 A0A1W2PNU3 283 aaPredicted RBP8.64□□□□□ -1.03
SKA1-201ENST00000285116 C12orf77C9JDV5 145 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 NDUFB8O95169 186 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 CBLN1P23435 193 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 ATP5G3P48201 142 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 PTTG1IPP53801 180 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 TMPRSS3P57727 454 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 ZNF90Q03938 601 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 TFF3Q07654 80 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 ASCL5Q7RTU5 278 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms