RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 FOLR2P14207 255 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 AREGP15514 252 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 NFYAP23511 347 aaPredicted RBP6.7□□□□□ -1.34
TPM3-201ENST00000271850 KIR2DS2P43631 304 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 CDK10Q15131 360 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 RTL8BQ17RB0 113 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 KLK9Q2XQG4 91 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 C15orf32Q32M92 178 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 VMA21Q3ZAQ7 101 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 OR2B11Q5JQS5 317 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 FAM223AQ8IWN6 122 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 PUSL1Q8N0Z8 303 aaKnown RBP6.7□□□□□ -1.34
TPM3-201ENST00000271850 OSR1Q8TAX0 266 aaPredicted RBP6.7□□□□□ -1.34
TPM3-201ENST00000271850 ACOT12Q8WYK0 555 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 SNAPC3Q92966 411 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 MISP3Q96FF7 219 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 MGLLQ99685 303 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 SRD5A3Q9H8P0 318 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 KLK9Q9UKQ9 250 aa6.7□□□□□ -1.34
TPM3-201ENST00000271850 OR11H12B2RN74 326 aa6.69□□□□□ -1.34
TPM3-201ENST00000271850 SSX5O60225 188 aa6.69□□□□□ -1.34
TPM3-201ENST00000271850 OR2C1O95371 312 aa6.69□□□□□ -1.34
TPM3-201ENST00000271850 HLA-DQB1P01920 261 aa6.69□□□□□ -1.34
TPM3-201ENST00000271850 IFNA6P05013 189 aa6.69□□□□□ -1.34
TPM3-201ENST00000271850 RRASP10301 218 aa6.69□□□□□ -1.34
TPM3-201ENST00000271850 ATP5G2Q06055 141 aa6.69□□□□□ -1.34
TPM3-201ENST00000271850 LCE5AQ5TCM9 118 aa6.69□□□□□ -1.34
TPM3-201ENST00000271850 ZNF773Q6PK81 442 aa6.69□□□□□ -1.34
TPM3-201ENST00000271850 UNQ9165/PRO28630Q6UXU0 137 aa6.69□□□□□ -1.34
TPM3-201ENST00000271850 PRSS48Q7RTY5 328 aa6.69□□□□□ -1.34
TPM3-201ENST00000271850 LAX1Q8IWV1 398 aa6.69□□□□□ -1.34
TPM3-201ENST00000271850 TMEM61Q8N0U2 210 aa6.69□□□□□ -1.34
TPM3-201ENST00000271850 ZNF645Q8N7E2 425 aa6.69□□□□□ -1.34
TPM3-201ENST00000271850 ZNF414Q96IQ9 312 aa6.69□□□□□ -1.34
TPM3-201ENST00000271850 OVOL2Q9BRP0 275 aa6.69□□□□□ -1.34
TPM3-201ENST00000271850 SCN3BQ9NY72 215 aa6.69□□□□□ -1.34
TPM3-201ENST00000271850 PEMTQ9UBM1 199 aa6.69□□□□□ -1.34
TPM3-201ENST00000271850 MLXQ9UH92 298 aa6.69□□□□□ -1.34
TPM3-201ENST00000271850 RBMX2Q9Y388 322 aaKnown RBP6.69□□□□□ -1.34
TPM3-201ENST00000271850 TRAV1-2A0A0B4J238 106 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 MFSD2BA6NFX1 497 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 NPIPB5A8MRT5 1133 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 LGALS9O00182 355 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 AIREO43918 545 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 TUSC2O75896 110 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 TPPPO94811 219 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 KBTBD11O94819 623 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 CRYGCP07315 174 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 ZNF735P0CB33 412 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 PTHLHP12272 177 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 CTRB1P17538 263 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 RAB6AP20340 208 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 PSMA1P25786 263 aaKnown RBP6.68□□□□□ -1.34
TPM3-201ENST00000271850 TRAM1Q15629 374 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 TBCEQ15813 527 aaPredicted RBP6.68□□□□□ -1.34
TPM3-201ENST00000271850 CTRB2Q6GPI1 263 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 NECAP1Q8NC96 275 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 NUDCD2Q8WVJ2 157 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 ADTRPQ96IZ2 230 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 GINS4Q9BRT9 223 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 ACOT13Q9NPJ3 140 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 NDUFB11Q9NX14 153 aa6.68□□□□□ -1.34
TPM3-201ENST00000271850 IGLV11-55A0A075B6I3 123 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 TRAV3A0A0B4J244 114 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 TMEM235A6NFC5 223 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 A8MWP6 167 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 MPPED1O15442 326 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 REG1AP05451 166 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 CBLN1P23435 193 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 DTYMKP23919 212 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 TATDN3Q17R31 274 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 CDNFQ49AH0 187 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 CLEC19AQ6UXS0 136 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 KCTD9Q7L273 389 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 GPHB5Q86YW7 130 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 MMD2Q8IY49 270 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 TMEM167AQ8TBQ9 72 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 DYNLRB2Q8TF09 96 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 LINC00476Q8WZB0 136 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 SPIN2AQ99865 258 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 SPIN2BQ9BPZ2 258 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 CCDC90BQ9GZT6 254 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 OR51E2Q9H255 320 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 FBXL7Q9UJT9 491 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 ZNF257Q9Y2Q1 563 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 TPRKBQ9Y3C4 175 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 OR2W1Q9Y3N9 320 aa6.67□□□□□ -1.34
TPM3-201ENST00000271850 RBM7Q9Y580 266 aaKnown RBP6.67□□□□□ -1.34
TPM3-201ENST00000271850 DNAH6Q9C0G6 4158 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 TRDV1A0A1B0GX56 115 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 GGCTO75223 188 aaKnown RBP6.66□□□□□ -1.34
TPM3-201ENST00000271850 JTBO76095 146 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 S1PR2O95136 353 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 C8orf88P0DMB2 117 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 RAB3BP20337 219 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 PSMB6P28072 239 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 RPL27AP46776 148 aaKnown RBP6.66□□□□□ -1.34
TPM3-201ENST00000271850 CBX3Q13185 183 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 ARFRP1Q13795 201 aa6.66□□□□□ -1.34
TPM3-201ENST00000271850 GUCA2BQ16661 112 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms