RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 HPRT1P00492 218 aa22.8■■□□□ 1.24
CBX4-201ENST00000269397 STAG3L2P0CL84 134 aa22.8■■□□□ 1.24
CBX4-201ENST00000269397 STAG3L3P0CL85 134 aa22.8■■□□□ 1.24
CBX4-201ENST00000269397 GPR12P47775 334 aa22.8■■□□□ 1.24
CBX4-201ENST00000269397 GABRA6Q16445 453 aa22.8■■□□□ 1.24
CBX4-201ENST00000269397 WDR82Q6UXN9 313 aa22.8■■□□□ 1.24
CBX4-201ENST00000269397 TMEM210A6NLX4 147 aa22.8■■□□□ 1.24
CBX4-201ENST00000269397 K7EN84 100 aa22.8■■□□□ 1.24
CBX4-201ENST00000269397 DUTP33316 252 aaKnown RBP22.8■■□□□ 1.24
CBX4-201ENST00000269397 RPL39P5Q59GN2 51 aa22.8■■□□□ 1.24
CBX4-201ENST00000269397 SEPSECSQ9HD40 501 aaKnown RBP22.8■■□□□ 1.24
CBX4-201ENST00000269397 A0A1W2PNU3 283 aaPredicted RBP22.79■■□□□ 1.24
CBX4-201ENST00000269397 OPRK1P41145 380 aa22.79■■□□□ 1.24
CBX4-201ENST00000269397 RPL31P62899 125 aaKnown RBP22.79■■□□□ 1.24
CBX4-201ENST00000269397 TMEM106BQ9NUM4 274 aa22.79■■□□□ 1.24
CBX4-201ENST00000269397 IL17BQ9UHF5 180 aa22.79■■□□□ 1.24
CBX4-201ENST00000269397 FOXH1O75593 365 aa22.79■■□□□ 1.24
CBX4-201ENST00000269397 SERF1AO75920 110 aa22.79■■□□□ 1.24
CBX4-201ENST00000269397 ZNF25P17030 456 aaPredicted RBP22.79■■□□□ 1.24
CBX4-201ENST00000269397 RAB4AP20338 218 aa22.79■■□□□ 1.24
CBX4-201ENST00000269397 CDKN1AP38936 164 aa22.79■■□□□ 1.24
CBX4-201ENST00000269397 FABP6P51161 128 aa22.79■■□□□ 1.24
CBX4-201ENST00000269397 A6NNC1 897 aa22.78■■□□□ 1.24
CBX4-201ENST00000269397 M0R1X1 148 aa22.78■■□□□ 1.24
CBX4-201ENST00000269397 CXorf1O96002 111 aa22.78■■□□□ 1.24
CBX4-201ENST00000269397 YPEL3P61236 119 aaPredicted RBP22.78■■□□□ 1.24
CBX4-201ENST00000269397 SPRY4Q9C004 299 aa22.78■■□□□ 1.24
CBX4-201ENST00000269397 MRPL18Q9H0U6 180 aaKnown RBP22.78■■□□□ 1.24
CBX4-201ENST00000269397 GNG12Q9UBI6 72 aa22.78■■□□□ 1.24
CBX4-201ENST00000269397 HSPB9Q9BQS6 159 aa22.77■■□□□ 1.24
CBX4-201ENST00000269397 TCTEX1D1Q8N7M0 179 aa22.77■■□□□ 1.24
CBX4-201ENST00000269397 BTF3L4Q96K17 158 aa22.77■■□□□ 1.24
CBX4-201ENST00000269397 PARD6AQ9NPB6 346 aa22.77■■□□□ 1.24
CBX4-201ENST00000269397 PAM16Q9Y3D7 125 aa22.77■■□□□ 1.24
CBX4-201ENST00000269397 ACP1P24666 158 aa22.76■■□□□ 1.23
CBX4-201ENST00000269397 OR5I1Q13606 314 aa22.76■■□□□ 1.23
CBX4-201ENST00000269397 TMEM249Q2WGJ8 235 aa22.76■■□□□ 1.23
CBX4-201ENST00000269397 C1orf159Q96HA4 380 aa22.76■■□□□ 1.23
CBX4-201ENST00000269397 SPENQ96T58 3664 aaKnown RBP22.76■■□□□ 1.23
CBX4-201ENST00000269397 SPINT2O43291 252 aa22.76■■□□□ 1.23
CBX4-201ENST00000269397 SPINK4O60575 86 aa22.76■■□□□ 1.23
CBX4-201ENST00000269397 GFRA3O60609 400 aa22.76■■□□□ 1.23
CBX4-201ENST00000269397 TDGF1P13385 188 aa22.76■■□□□ 1.23
CBX4-201ENST00000269397 CRISP2P16562 243 aa22.76■■□□□ 1.23
CBX4-201ENST00000269397 IER3P46695 156 aa22.76■■□□□ 1.23
CBX4-201ENST00000269397 KRTCAP3Q53RY4 240 aa22.76■■□□□ 1.23
CBX4-201ENST00000269397 CD177Q8N6Q3 437 aa22.76■■□□□ 1.23
CBX4-201ENST00000269397 KLRC4-KLRK1H3BQV0 150 aa22.75■■□□□ 1.23
CBX4-201ENST00000269397 C15orf65H3BRN8 121 aa22.75■■□□□ 1.23
CBX4-201ENST00000269397 TRGV5A0A0B4J1U4 118 aa22.75■■□□□ 1.23
CBX4-201ENST00000269397 TIMM8AO60220 97 aaPredicted RBP22.75■■□□□ 1.23
CBX4-201ENST00000269397 VDAC2P45880 294 aaPredicted RBP22.75■■□□□ 1.23
CBX4-201ENST00000269397 ZNF718Q3SXZ3 478 aa22.75■■□□□ 1.23
CBX4-201ENST00000269397 ATP1A1-AS1Q5TC04 95 aa22.75■■□□□ 1.23
CBX4-201ENST00000269397 VN1R17PQ8TDU5 208 aa22.75■■□□□ 1.23
CBX4-201ENST00000269397 KLF13Q9Y2Y9 288 aaPredicted RBP22.75■■□□□ 1.23
CBX4-201ENST00000269397 COL27A1Q8IZC6 1860 aaPredicted RBP22.75■■□□□ 1.23
CBX4-201ENST00000269397 PRSS46E5RG02 174 aa22.75■■□□□ 1.23
CBX4-201ENST00000269397 GCHFRP30047 84 aa22.75■■□□□ 1.23
CBX4-201ENST00000269397 UTF1Q5T230 341 aa22.75■■□□□ 1.23
CBX4-201ENST00000269397 OR1L6Q8NGR2 347 aa22.75■■□□□ 1.23
CBX4-201ENST00000269397 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP22.74■■□□□ 1.23
CBX4-201ENST00000269397 J3QW42 95 aa22.74■■□□□ 1.23
CBX4-201ENST00000269397 YPEL1O60688 119 aa22.74■■□□□ 1.23
CBX4-201ENST00000269397 MPDU1O75352 247 aa22.74■■□□□ 1.23
CBX4-201ENST00000269397 TPPP2P59282 170 aa22.74■■□□□ 1.23
CBX4-201ENST00000269397 BAGE3Q86Y29 109 aa22.74■■□□□ 1.23
CBX4-201ENST00000269397 BAGE2Q86Y30 109 aa22.74■■□□□ 1.23
CBX4-201ENST00000269397 YPEL2Q96QA6 119 aa22.74■■□□□ 1.23
CBX4-201ENST00000269397 FCN1O00602 326 aa22.74■■□□□ 1.23
CBX4-201ENST00000269397 LAMTOR5O43504 91 aa22.74■■□□□ 1.23
CBX4-201ENST00000269397 WISP2O76076 250 aa22.74■■□□□ 1.23
CBX4-201ENST00000269397 IL6RP08887 468 aaPredicted RBP22.74■■□□□ 1.23
CBX4-201ENST00000269397 TPTE2P1Q5T6R2 138 aa22.74■■□□□ 1.23
CBX4-201ENST00000269397 PEAR1Q5VY43 1037 aaPredicted RBP22.74■■□□□ 1.23
CBX4-201ENST00000269397 CXXC4Q9H2H0 198 aa22.74■■□□□ 1.23
CBX4-201ENST00000269397 IL36BQ9NZH7 164 aa22.74■■□□□ 1.23
CBX4-201ENST00000269397 EFNB3Q15768 340 aa22.73■■□□□ 1.23
CBX4-201ENST00000269397 LEAP2Q969E1 77 aa22.73■■□□□ 1.23
CBX4-201ENST00000269397 HEATR1Q9H583 2144 aaKnown RBP22.73■■□□□ 1.23
CBX4-201ENST00000269397 ACTL6BO94805 426 aa22.73■■□□□ 1.23
CBX4-201ENST00000269397 IRF2P14316 349 aa22.73■■□□□ 1.23
CBX4-201ENST00000269397 ZNF134P52741 427 aa22.73■■□□□ 1.23
CBX4-201ENST00000269397 RPP30P78346 268 aaKnown RBP22.73■■□□□ 1.23
CBX4-201ENST00000269397 WDR31Q8NA23 367 aa22.73■■□□□ 1.23
CBX4-201ENST00000269397 MDS2Q8NDY4 140 aa22.73■■□□□ 1.23
CBX4-201ENST00000269397 ZPBPQ9BS86 351 aa22.73■■□□□ 1.23
CBX4-201ENST00000269397 SELENOTP62341 195 aa22.72■■□□□ 1.23
CBX4-201ENST00000269397 RELBQ01201 579 aa22.72■■□□□ 1.23
CBX4-201ENST00000269397 ARSJQ5FYB0 599 aaPredicted RBP22.72■■□□□ 1.23
CBX4-201ENST00000269397 FAM103A1Q9BTL3 118 aaKnown RBP22.72■■□□□ 1.23
CBX4-201ENST00000269397 TMEM140Q9NV12 185 aa22.72■■□□□ 1.23
CBX4-201ENST00000269397 BATFQ16520 125 aa22.72■■□□□ 1.23
CBX4-201ENST00000269397 STPG3Q8N7X2 389 aa22.72■■□□□ 1.23
CBX4-201ENST00000269397 OR4P4Q8NGL7 312 aa22.72■■□□□ 1.23
CBX4-201ENST00000269397 SMIM21Q3B7S5 101 aa22.71■■□□□ 1.23
CBX4-201ENST00000269397 CNEP1R1Q8N9A8 125 aa22.71■■□□□ 1.23
CBX4-201ENST00000269397 PRR7Q8TB68 274 aa22.71■■□□□ 1.23
CBX4-201ENST00000269397 LRRC29Q8WV35 223 aa22.71■■□□□ 1.23
CBX4-201ENST00000269397 SAMD10Q9BYL1 202 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms