RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 TNRC6AQ8NDV7 1962 aaKnown RBP13.25□□□□□ -0.29
LMNB1-201ENST00000261366 C19orf67A6NJJ6 358 aa13.25□□□□□ -0.29
LMNB1-201ENST00000261366 PRAMEF5Q5TYX0 476 aa13.25□□□□□ -0.29
LMNB1-201ENST00000261366 PRAMEF6Q5VXH4 476 aa13.25□□□□□ -0.29
LMNB1-201ENST00000261366 TMEM45BQ96B21 275 aa13.25□□□□□ -0.29
LMNB1-201ENST00000261366 CIB3Q96Q77 187 aaPredicted RBP13.25□□□□□ -0.29
LMNB1-201ENST00000261366 HINT2Q9BX68 163 aa13.25□□□□□ -0.29
LMNB1-201ENST00000261366 MBNL3Q9NUK0 354 aaKnown RBP13.25□□□□□ -0.29
LMNB1-201ENST00000261366 NAT8BQ9UHF3 227 aa13.25□□□□□ -0.29
LMNB1-201ENST00000261366 WDR83OSQ9Y284 106 aa13.25□□□□□ -0.29
LMNB1-201ENST00000261366 TRAV3A0A0B4J244 114 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 M0QZK8 103 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 AMTP48728 403 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 CLDN18P56856 261 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 HTD2P86397 168 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 TREML4Q6UXN2 200 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 TEX43Q6ZNM6 134 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 DOLPP1Q86YN1 238 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 FAM19A2Q8N3H0 131 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 MGST2Q99735 147 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 LOXL2Q9Y4K0 774 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 TMEM30CPA0ZSE6 113 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 DIRC3C9JPN6 131 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 SS18L1O75177 396 aaPredicted RBP13.24□□□□□ -0.29
LMNB1-201ENST00000261366 P0C879 139 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 CD99P14209 185 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 UBE2NP61088 152 aaKnown RBP13.24□□□□□ -0.29
LMNB1-201ENST00000261366 C1orf210Q8IVY1 113 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 ST6GALNAC3Q8NDV1 305 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 GNB4Q9HAV0 340 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 FOXJ2Q9P0K8 574 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 MED13Q9UHV7 2174 aa13.24□□□□□ -0.29
LMNB1-201ENST00000261366 NTF3P20783 257 aa13.23□□□□□ -0.29
LMNB1-201ENST00000261366 RAB7AP51149 207 aa13.23□□□□□ -0.29
LMNB1-201ENST00000261366 PLGLB1Q02325 96 aa13.23□□□□□ -0.29
LMNB1-201ENST00000261366 FAM122AQ96E09 287 aa13.23□□□□□ -0.29
LMNB1-201ENST00000261366 RCHY1Q96PM5 261 aa13.23□□□□□ -0.29
LMNB1-201ENST00000261366 UHRF2Q96PU4 802 aa13.23□□□□□ -0.29
LMNB1-201ENST00000261366 RNASE7Q9H1E1 156 aaKnown RBP13.23□□□□□ -0.29
LMNB1-201ENST00000261366 DNAJC4Q9NNZ3 241 aa13.23□□□□□ -0.29
LMNB1-201ENST00000261366 BOKQ9UMX3 212 aaPredicted RBP13.23□□□□□ -0.29
LMNB1-201ENST00000261366 TBL2Q9Y4P3 447 aaKnown RBP13.23□□□□□ -0.29
LMNB1-201ENST00000261366 NCOR1O75376 2440 aa13.23□□□□□ -0.29
LMNB1-201ENST00000261366 HCFC1P51610 2035 aa13.23□□□□□ -0.29
LMNB1-201ENST00000261366 YPEL3P61236 119 aaPredicted RBP13.23□□□□□ -0.29
LMNB1-201ENST00000261366 MRPL54Q6P161 138 aaKnown RBP13.23□□□□□ -0.29
LMNB1-201ENST00000261366 MMD2Q8IY49 270 aa13.23□□□□□ -0.29
LMNB1-201ENST00000261366 OR2M7Q8NG81 312 aa13.23□□□□□ -0.29
LMNB1-201ENST00000261366 OR13A1Q8NGR1 328 aa13.23□□□□□ -0.29
LMNB1-201ENST00000261366 C20orf144Q9BQM9 153 aa13.23□□□□□ -0.29
LMNB1-201ENST00000261366 POLDIP2Q9Y2S7 368 aa13.23□□□□□ -0.29
LMNB1-201ENST00000261366 MRPS18CQ9Y3D5 142 aaKnown RBP13.23□□□□□ -0.29
LMNB1-201ENST00000261366 MRPS11P82912 194 aaKnown RBP13.22□□□□□ -0.29
LMNB1-201ENST00000261366 SPATA45Q537H7 98 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 OR4P4Q8NGL7 312 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 TXN2Q99757 166 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 WIPI2Q9Y4P8 454 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 IGKV3D-15A0A087WSY6 115 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 RAB29O14966 203 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 CHRNB4P30926 498 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 COMPP49747 757 aaPredicted RBP13.22□□□□□ -0.29
LMNB1-201ENST00000261366 PAFAH1B2P68402 229 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 RELQ04864 619 aaPredicted RBP13.22□□□□□ -0.29
LMNB1-201ENST00000261366 OR4A16Q8NH70 328 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 LINC00470Q9BZP3 86 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 IL36BQ9NZH7 164 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 CGAP01215 116 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 RANP62826 216 aaKnown RBP13.22□□□□□ -0.29
LMNB1-201ENST00000261366 MAJINQ3KP22 176 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 NRN1LQ496H8 165 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 ALKBH2Q6NS38 261 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 SLC25A40Q8TBP6 338 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 COQ2Q96H96 371 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 GGTLC1Q9BX51 225 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 GCM1Q9NP62 436 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 SERTAD4Q9NUC0 356 aa13.22□□□□□ -0.29
LMNB1-201ENST00000261366 BOD1L1Q8NFC6 3051 aa13.21□□□□□ -0.29
LMNB1-201ENST00000261366 MAP1BP46821 2468 aaKnown RBP13.21□□□□□ -0.29
LMNB1-201ENST00000261366 NTN3O00634 580 aaPredicted RBP13.21□□□□□ -0.29
LMNB1-201ENST00000261366 NHLRC2Q8NBF2 726 aa13.21□□□□□ -0.29
LMNB1-201ENST00000261366 ZNF703Q9H7S9 590 aaPredicted RBP13.21□□□□□ -0.29
LMNB1-201ENST00000261366 CXorf1O96002 111 aa13.21□□□□□ -0.3
LMNB1-201ENST00000261366 CA1P00915 261 aaPredicted RBP13.21□□□□□ -0.3
LMNB1-201ENST00000261366 IL6RP08887 468 aaPredicted RBP13.21□□□□□ -0.3
LMNB1-201ENST00000261366 ERVK11-1P61568 191 aa13.21□□□□□ -0.3
LMNB1-201ENST00000261366 FOXF2Q12947 444 aa13.21□□□□□ -0.3
LMNB1-201ENST00000261366 VWC2Q2TAL6 325 aa13.21□□□□□ -0.3
LMNB1-201ENST00000261366 RPL39P5Q59GN2 51 aa13.21□□□□□ -0.3
LMNB1-201ENST00000261366 Q6ZN92 141 aa13.21□□□□□ -0.3
LMNB1-201ENST00000261366 STPG4Q8N801 248 aa13.21□□□□□ -0.3
LMNB1-201ENST00000261366 LEAP2Q969E1 77 aa13.21□□□□□ -0.3
LMNB1-201ENST00000261366 CBY1Q9Y3M2 126 aa13.21□□□□□ -0.3
LMNB1-201ENST00000261366 RP1L1Q8IWN7 2480 aaPredicted RBP13.2□□□□□ -0.3
LMNB1-201ENST00000261366 KMT2EQ8IZD2 1858 aa13.2□□□□□ -0.3
LMNB1-201ENST00000261366 CER1O95813 267 aa13.2□□□□□ -0.3
LMNB1-201ENST00000261366 STAG3L2P0CL84 134 aa13.2□□□□□ -0.3
LMNB1-201ENST00000261366 STAG3L3P0CL85 134 aa13.2□□□□□ -0.3
LMNB1-201ENST00000261366 MYOD1P15172 320 aa13.2□□□□□ -0.3
LMNB1-201ENST00000261366 GCHFRP30047 84 aa13.2□□□□□ -0.3
LMNB1-201ENST00000261366 SUMO1P63165 101 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms