RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 ARFGEF3Q5TH69 2177 aa14.46□□□□□ -0.09
SSB-201ENST00000260956 UBE2L5PA0A1B0GUS4 154 aa14.46□□□□□ -0.1
SSB-201ENST00000260956 LOC102723971A0A1B0GUV8 181 aa14.46□□□□□ -0.1
SSB-201ENST00000260956 PRSS46E5RG02 174 aa14.46□□□□□ -0.1
SSB-201ENST00000260956 SCAF4O95104 1147 aaKnown RBP14.46□□□□□ -0.1
SSB-201ENST00000260956 IGKV1D-33P01593 117 aa14.46□□□□□ -0.1
SSB-201ENST00000260956 IGKV1-33P01594 117 aa14.46□□□□□ -0.1
SSB-201ENST00000260956 GNB2P62879 340 aa14.46□□□□□ -0.1
SSB-201ENST00000260956 SLC25A48Q6ZT89 311 aaKnown RBP14.46□□□□□ -0.1
SSB-201ENST00000260956 ZNF383Q8NA42 475 aa14.46□□□□□ -0.1
SSB-201ENST00000260956 LINC00312Q9Y6C7 94 aa14.46□□□□□ -0.1
SSB-201ENST00000260956 IL6RP08887 468 aaPredicted RBP14.45□□□□□ -0.1
SSB-201ENST00000260956 OR2B8PP59922 312 aa14.45□□□□□ -0.1
SSB-201ENST00000260956 AWAT1Q58HT5 328 aa14.45□□□□□ -0.1
SSB-201ENST00000260956 TMEM41BQ5BJD5 291 aa14.45□□□□□ -0.1
SSB-201ENST00000260956 OR8G2PQ6IF36 304 aa14.45□□□□□ -0.1
SSB-201ENST00000260956 TRAV3A0A0B4J244 114 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 A0A1W2PPE3 182 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 COLCA2A8K830 154 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 HSPB1P04792 205 aaKnown RBP14.44□□□□□ -0.1
SSB-201ENST00000260956 IRF2P14316 349 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 PMS2P11Q13670 270 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 EFNB3Q15768 340 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 HAGHQ16775 308 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 ACSM6Q6P461 480 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 ZNF429Q86V71 674 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 SFT2D1Q8WV19 159 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 TMEM170AQ8WVE7 144 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 EGLN1Q9GZT9 426 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 TMEM140Q9NV12 185 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 MYO9AB2RTY4 2548 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 NKX6-3A6NJ46 265 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 NQO2P16083 231 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 THBS3P49746 956 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 SPCS3P61009 180 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 MEF2CQ06413 473 aaPredicted RBP14.44□□□□□ -0.1
SSB-201ENST00000260956 SPINK9Q5DT21 86 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 PRAMEF5Q5TYX0 476 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 SLC25A24Q6NUK1 477 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 OR10A7Q8NGE5 316 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 OR10G4Q8NGN3 311 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 OR4S2Q8NH73 311 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 S1PR3Q99500 378 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 PRELID3BQ9Y3B1 194 aa14.44□□□□□ -0.1
SSB-201ENST00000260956 TRAV38-1A0A0B4J264 116 aa14.43□□□□□ -0.1
SSB-201ENST00000260956 C7orf77A4D0Y5 90 aa14.43□□□□□ -0.1
SSB-201ENST00000260956 LY86O95711 162 aa14.43□□□□□ -0.1
SSB-201ENST00000260956 KHDC3LQ587J8 217 aa14.43□□□□□ -0.1
SSB-201ENST00000260956 VKORC1L1Q8N0U8 176 aa14.43□□□□□ -0.1
SSB-201ENST00000260956 PINX1Q96BK5 328 aaKnown RBP14.43□□□□□ -0.1
SSB-201ENST00000260956 SAP30LQ9HAJ7 183 aa14.43□□□□□ -0.1
SSB-201ENST00000260956 hADV38S2A0JD32 116 aa14.42□□□□□ -0.1
SSB-201ENST00000260956 C15orf61A6NNL5 157 aa14.42□□□□□ -0.1
SSB-201ENST00000260956 CEBPZOSA8MTT3 80 aa14.42□□□□□ -0.1
SSB-201ENST00000260956 MRPS11P82912 194 aaKnown RBP14.42□□□□□ -0.1
SSB-201ENST00000260956 SMUG1Q53HV7 270 aa14.42□□□□□ -0.1
SSB-201ENST00000260956 RPP25LQ8N5L8 163 aaKnown RBP14.42□□□□□ -0.1
SSB-201ENST00000260956 ADTRPQ96IZ2 230 aa14.42□□□□□ -0.1
SSB-201ENST00000260956 OR13C7P0DN81 318 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 DLX6P56179 175 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 RAB2AP61019 212 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 OR10P1Q8NGE3 313 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 TUBA4BQ9H853 241 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 NGBQ9NPG2 151 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 SMCO4Q9NRQ5 59 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 TMEM14BQ9NUH8 114 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 TMEM106BQ9NUM4 274 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 CTSZQ9UBR2 303 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 SLC25A10Q9UBX3 287 aaPredicted RBP14.41□□□□□ -0.1
SSB-201ENST00000260956 FOXA2Q9Y261 457 aaPredicted RBP14.41□□□□□ -0.1
SSB-201ENST00000260956 TMPRSS2O15393 492 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 GOSR1O95249 250 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 CD3EP07766 207 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 RHEBQ15382 184 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 HEPN1Q6WQI6 88 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 ZNF833PQ6ZTB9 187 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 SSX9Q7RTT3 188 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 ZNF596Q8TC21 504 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 YPEL4Q96NS1 127 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 ZNRD1Q9P1U0 126 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 TCF19Q9Y242 345 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 WDR83OSQ9Y284 106 aa14.41□□□□□ -0.1
SSB-201ENST00000260956 PPIAL4EA0A075B759 164 aa14.4□□□□□ -0.1
SSB-201ENST00000260956 PPIAL4DF5H284 164 aa14.4□□□□□ -0.1
SSB-201ENST00000260956 CT45A6P0DMU7 189 aa14.4□□□□□ -0.1
SSB-201ENST00000260956 CT45A5P0DMU8 189 aa14.4□□□□□ -0.1
SSB-201ENST00000260956 CT45A7P0DMV0 189 aa14.4□□□□□ -0.1
SSB-201ENST00000260956 PPIAL4FP0DN26 164 aa14.4□□□□□ -0.1
SSB-201ENST00000260956 BCL2P10415 239 aa14.4□□□□□ -0.1
SSB-201ENST00000260956 FOLR2P14207 255 aa14.4□□□□□ -0.1
SSB-201ENST00000260956 ERVK-16P61578 105 aa14.4□□□□□ -0.1
SSB-201ENST00000260956 SOHLH1Q5JUK2 328 aa14.4□□□□□ -0.1
SSB-201ENST00000260956 OR4A47Q6IF82 309 aa14.4□□□□□ -0.1
SSB-201ENST00000260956 C1orf87Q8N0U7 546 aa14.4□□□□□ -0.1
SSB-201ENST00000260956 LYG1Q8N1E2 194 aa14.4□□□□□ -0.1
SSB-201ENST00000260956 CYB561D1Q8N8Q1 229 aa14.4□□□□□ -0.1
SSB-201ENST00000260956 RXFP4Q8TDU9 374 aa14.4□□□□□ -0.1
SSB-201ENST00000260956 CLCC1Q96S66 551 aa14.4□□□□□ -0.1
SSB-201ENST00000260956 NPCDR1Q9BY65 106 aa14.4□□□□□ -0.1
SSB-201ENST00000260956 CISD1Q9NZ45 108 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms