RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 KMT2EQ8IZD2 1858 aa9.6□□□□□ -0.87
TROAP-201ENST00000257909 IGHV2-70DA0A0C4DH43 119 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 HSBP1L1C9JCN9 74 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 HLA-DQA1P01909 254 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 FRMD6-AS1P0C7T7 363 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 HINT1P49773 126 aaPredicted RBP9.59□□□□□ -0.87
TROAP-201ENST00000257909 FBLN7Q53RD9 439 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 SPINK9Q5DT21 86 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 STUMQ69YW2 141 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 NIT1Q86X76 327 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 ZNF808Q8N4W9 903 aaPredicted RBP9.59□□□□□ -0.87
TROAP-201ENST00000257909 RCHY1Q96PM5 261 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 GGTLC1Q9BX51 225 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 SDK2Q58EX2 2172 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 A0A096LPE4 126 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 TRAV34A0A0B4J273 112 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 IGHV1-69-2A0A0G2JMI3 117 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 A0A1W2PPZ6 126 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 RRHO14718 337 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 COX6A1P12074 109 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 AREGP15514 252 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 TNFSF4P23510 183 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 BRWD1-AS2P59051 145 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 ESPL1Q14674 2120 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 UNQ5815/PRO19632Q6UWF5 114 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 TIPARPQ7Z3E1 657 aaKnown RBP9.59□□□□□ -0.87
TROAP-201ENST00000257909 OR4C5Q8NGB2 326 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 MRGPRDQ8TDS7 321 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 C5orf30Q96GV9 206 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 WNT10AQ9GZT5 417 aa9.59□□□□□ -0.87
TROAP-201ENST00000257909 AKIRIN1Q9H9L7 192 aaPredicted RBP9.59□□□□□ -0.87
TROAP-201ENST00000257909 LOC105371242A0A075B767 164 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 NXPH2O95156 264 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 P04436 131 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 AMY1AP04745 511 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 ARR3P36575 388 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 GFRA1P56159 465 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 TMPRSS3P57727 454 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 RHOBP62745 196 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 IGFBP7Q16270 282 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 MGST2Q99735 147 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 MRPL27Q9P0M9 148 aaKnown RBP9.58□□□□□ -0.88
TROAP-201ENST00000257909 POLDIP2Q9Y2S7 368 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 ARL2-SNX15V9GYD0 113 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 USF3Q68DE3 2245 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 C3orf80F5H4A9 247 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 ZNHIT1O43257 154 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 CA2P00918 260 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 CA6P23280 308 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 SRIP30626 198 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 CEACAM8P31997 349 aaPredicted RBP9.58□□□□□ -0.88
TROAP-201ENST00000257909 GNG4P50150 75 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 PLP2Q04941 152 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 MIC13Q5XKP0 118 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 SMRP1Q8NCR6 262 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 NINJ1Q92982 152 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 OSTCQ9NRP0 149 aa9.58□□□□□ -0.88
TROAP-201ENST00000257909 IGHV5-10-1A0A0J9YXX1 117 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 PPBPP02775 128 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 CLDN18P56856 261 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 ZNF146Q15072 292 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 C9orf135Q5VTT2 229 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 TMPRSS7Q7RTY8 843 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 ZNF439Q8NDP4 499 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 TSKUQ8WUA8 353 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 RTL8AQ9BWD3 113 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 DEPPQ9NTK1 212 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 IGKV3D-15A0A087WSY6 115 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 TRAV30A0A087WSZ9 112 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 TMEM30CPA0ZSE6 113 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 BMPR1BO00238 502 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 SPINK2P20155 84 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 ERVK11-1P61568 191 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 KIAA1644Q3SXP7 199 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 WIPI1Q5MNZ9 446 aaPredicted RBP9.57□□□□□ -0.88
TROAP-201ENST00000257909 VASH2Q86V25 355 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 OR4P4Q8NGL7 312 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 HSD17B10Q99714 261 aaKnown RBP9.57□□□□□ -0.88
TROAP-201ENST00000257909 MS4A5Q9H3V2 200 aa9.57□□□□□ -0.88
TROAP-201ENST00000257909 TRAV9-2A0A087WT02 112 aa9.56□□□□□ -0.88
TROAP-201ENST00000257909 IGLC7A0M8Q6 106 aa9.56□□□□□ -0.88
TROAP-201ENST00000257909 HELTA6NFD8 242 aa9.56□□□□□ -0.88
TROAP-201ENST00000257909 OOEPA6NGQ2 149 aa9.56□□□□□ -0.88
TROAP-201ENST00000257909 FAM90A9PA6NNJ1 464 aa9.56□□□□□ -0.88
TROAP-201ENST00000257909 SELENOVP59797 346 aa9.56□□□□□ -0.88
TROAP-201ENST00000257909 RPS20P60866 119 aaKnown RBP9.56□□□□□ -0.88
TROAP-201ENST00000257909 EFNB3Q15768 340 aa9.56□□□□□ -0.88
TROAP-201ENST00000257909 GCNT2Q8N0V5 402 aa9.56□□□□□ -0.88
TROAP-201ENST00000257909 SH3BGRL2Q9UJC5 107 aa9.56□□□□□ -0.88
TROAP-201ENST00000257909 NCKAP5O14513 1909 aa9.56□□□□□ -0.88
TROAP-201ENST00000257909 A0A0G2JMM0 328 aa9.56□□□□□ -0.88
TROAP-201ENST00000257909 A0A1W2PPB8 328 aa9.56□□□□□ -0.88
TROAP-201ENST00000257909 A0A1W2PRS3 328 aa9.56□□□□□ -0.88
TROAP-201ENST00000257909 ZNF503-AS2A6NEH8 195 aa9.56□□□□□ -0.88
TROAP-201ENST00000257909 KIR3DP1A8MWS1 328 aa9.56□□□□□ -0.88
TROAP-201ENST00000257909 C12orf77C9JDV5 145 aa9.56□□□□□ -0.88
TROAP-201ENST00000257909 CENPWQ5EE01 88 aa9.56□□□□□ -0.88
TROAP-201ENST00000257909 SMIM15Q7Z3B0 74 aa9.56□□□□□ -0.88
TROAP-201ENST00000257909 MUC15Q8N387 334 aa9.56□□□□□ -0.88
TROAP-201ENST00000257909 OR52L2PQ8NGH6 319 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms