RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 LRRC75BQ2VPJ9 315 aa9.78□□□□□ -0.84
SOX9-201ENST00000245479 COX19Q49B96 90 aa9.78□□□□□ -0.84
SOX9-201ENST00000245479 RBMXL3Q8N7X1 1067 aaKnown RBP9.78□□□□□ -0.84
SOX9-201ENST00000245479 LRTM2Q8N967 370 aa9.78□□□□□ -0.84
SOX9-201ENST00000245479 FAM173AQ9BQD7 235 aa9.78□□□□□ -0.84
SOX9-201ENST00000245479 TAAR3PQ9P1P4 343 aa9.78□□□□□ -0.84
SOX9-201ENST00000245479 ATP23Q9Y6H3 246 aa9.78□□□□□ -0.84
SOX9-201ENST00000245479 YLPM1P49750 1951 aaKnown RBP9.78□□□□□ -0.84
SOX9-201ENST00000245479 ZNF503-AS2A6NEH8 195 aa9.77□□□□□ -0.84
SOX9-201ENST00000245479 APCSP02743 223 aa9.77□□□□□ -0.84
SOX9-201ENST00000245479 KLF3P57682 345 aaPredicted RBP9.77□□□□□ -0.84
SOX9-201ENST00000245479 PSG5Q15238 335 aa9.77□□□□□ -0.84
SOX9-201ENST00000245479 GABRA6Q16445 453 aa9.77□□□□□ -0.84
SOX9-201ENST00000245479 TRAT1Q6PIZ9 186 aa9.77□□□□□ -0.84
SOX9-201ENST00000245479 UBALD2Q8IYN6 164 aa9.77□□□□□ -0.84
SOX9-201ENST00000245479 FGFRL1Q8N441 504 aa9.77□□□□□ -0.84
SOX9-201ENST00000245479 ZNF525Q8N782 197 aa9.77□□□□□ -0.84
SOX9-201ENST00000245479 C1orf147Q96MC9 270 aaPredicted RBP9.77□□□□□ -0.84
SOX9-201ENST00000245479 NEU1Q99519 415 aa9.77□□□□□ -0.84
SOX9-201ENST00000245479 LRFN3Q9BTN0 628 aa9.77□□□□□ -0.84
SOX9-201ENST00000245479 TMEM191AQ9H0A3 160 aa9.77□□□□□ -0.84
SOX9-201ENST00000245479 PCED1AQ9H1Q7 454 aa9.77□□□□□ -0.84
SOX9-201ENST00000245479 TECRQ9NZ01 308 aaKnown RBP9.77□□□□□ -0.84
SOX9-201ENST00000245479 POLR3KQ9Y2Y1 108 aaPredicted RBP9.77□□□□□ -0.84
SOX9-201ENST00000245479 CSPG4Q6UVK1 2322 aa9.77□□□□□ -0.84
SOX9-201ENST00000245479 ZZEF1O43149 2961 aa9.77□□□□□ -0.85
SOX9-201ENST00000245479 A0A1B0GUS0 222 aa9.77□□□□□ -0.85
SOX9-201ENST00000245479 PMCHL1Q16048 86 aa9.77□□□□□ -0.85
SOX9-201ENST00000245479 ZNF766Q5HY98 468 aa9.77□□□□□ -0.85
SOX9-201ENST00000245479 RNASEH2CQ8TDP1 164 aaKnown RBP9.77□□□□□ -0.85
SOX9-201ENST00000245479 GMPPAQ96IJ6 420 aaPredicted RBP9.77□□□□□ -0.85
SOX9-201ENST00000245479 NOTCH2Q04721 2471 aa9.77□□□□□ -0.85
SOX9-201ENST00000245479 SYNGR3O43761 229 aa9.77□□□□□ -0.85
SOX9-201ENST00000245479 MT-ND6P03923 174 aa9.77□□□□□ -0.85
SOX9-201ENST00000245479 APELAP0DMC3 54 aa9.77□□□□□ -0.85
SOX9-201ENST00000245479 OTX1P32242 354 aaPredicted RBP9.77□□□□□ -0.85
SOX9-201ENST00000245479 MFAP2P55001 183 aa9.77□□□□□ -0.85
SOX9-201ENST00000245479 GNB2P62879 340 aa9.77□□□□□ -0.85
SOX9-201ENST00000245479 FXYD3Q14802 87 aa9.77□□□□□ -0.85
SOX9-201ENST00000245479 MMD2Q8IY49 270 aa9.77□□□□□ -0.85
SOX9-201ENST00000245479 FAM19A2Q8N3H0 131 aa9.77□□□□□ -0.85
SOX9-201ENST00000245479 GATAD1Q8WUU5 269 aa9.77□□□□□ -0.85
SOX9-201ENST00000245479 PSG11Q9UQ72 335 aa9.77□□□□□ -0.85
SOX9-201ENST00000245479 J3QR89 54 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 CXorf1O96002 111 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 CSN3P07498 182 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 CD1BP29016 333 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 ATP5G3P48201 142 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 AARDQ4LEZ3 155 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 MOB1BQ7L9L4 216 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 VKORC1L1Q8N0U8 176 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 OR2Z1Q8NG97 314 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 GAL3ST2Q9H3Q3 398 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 ZNF71Q9NQZ8 489 aaPredicted RBP9.76□□□□□ -0.85
SOX9-201ENST00000245479 FADS6Q8N9I5 356 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 LYPD6BQ8NI32 183 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 KALRNO60229 2985 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 IL15RAQ13261 267 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 LDLRAD2Q5SZI1 272 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 UNQ5815/PRO19632Q6UWF5 114 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 ZCCHC24Q8N2G6 241 aaKnown RBP9.76□□□□□ -0.85
SOX9-201ENST00000245479 SLC25A40Q8TBP6 338 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 KCNE4Q8WWG9 221 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 TMEM56Q96MV1 263 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 TMEM56-RWDD3S4R434 201 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 ACACBO00763 2458 aa9.76□□□□□ -0.85
SOX9-201ENST00000245479 NPIPB13A6NJU9 1138 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 NPIPB4C9JG80 1138 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 NAPSAO96009 420 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 ARL3P36405 182 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 S1PR3Q99500 378 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 HSD17B10Q99714 261 aaKnown RBP9.75□□□□□ -0.85
SOX9-201ENST00000245479 NRN1Q9NPD7 142 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 SLC45A2Q9UMX9 530 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 GAGE10A6NGK3 116 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 SCGB2A2Q13296 93 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 TRA2AQ13595 282 aaKnown RBP eCLIP9.75□□□□□ -0.85
SOX9-201ENST00000245479 GGNQ86UU5 652 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 OR52L2PQ8NGH6 319 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 MBD3L1Q8WWY6 194 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 ST6GALNAC6Q969X2 333 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 GUCD1Q96NT3 240 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 WDR54Q9H977 334 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 SH2D2AQ9NP31 389 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 FBLL1A6NHQ2 334 aaKnown RBP9.75□□□□□ -0.85
SOX9-201ENST00000245479 M0R1B8 84 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 ZG16O60844 167 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 OR2D3Q8NGH3 330 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 PPIAL4AQ9Y536 164 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 ZNF716A6NP11 495 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 CRYABP02511 175 aaKnown RBP9.75□□□□□ -0.85
SOX9-201ENST00000245479 ARL14EPLP0DKL9 152 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 TBC1D28Q2M2D7 210 aa9.75□□□□□ -0.85
SOX9-201ENST00000245479 TRAV1-1A0A0B4J248 108 aa9.74□□□□□ -0.85
SOX9-201ENST00000245479 TMEM30CPA0ZSE6 113 aa9.74□□□□□ -0.85
SOX9-201ENST00000245479 FAM157AC9JC47 383 aa9.74□□□□□ -0.85
SOX9-201ENST00000245479 PFN1P07737 140 aaKnown RBP9.74□□□□□ -0.85
SOX9-201ENST00000245479 FGF12P61328 243 aa9.74□□□□□ -0.85
SOX9-201ENST00000245479 FBLN7Q53RD9 439 aa9.74□□□□□ -0.85
SOX9-201ENST00000245479 C20orf204Q6ZNR8 217 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms