RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 HIPK2Q9H2X6 1198 aa13.93□□□□□ -0.18
SSPN-201ENST00000242729 DCHS2Q6V1P9 2916 aa13.93□□□□□ -0.18
SSPN-201ENST00000242729 Q8N7P7 452 aa13.93□□□□□ -0.18
SSPN-201ENST00000242729 LOXL4Q96JB6 756 aa13.93□□□□□ -0.18
SSPN-201ENST00000242729 OR5B12Q96R08 314 aa13.93□□□□□ -0.18
SSPN-201ENST00000242729 ASCL3Q9NQ33 180 aa13.93□□□□□ -0.18
SSPN-201ENST00000242729 TMEM140Q9NV12 185 aa13.93□□□□□ -0.18
SSPN-201ENST00000242729 GFOD1Q9NXC2 390 aa13.93□□□□□ -0.18
SSPN-201ENST00000242729 ZZEF1O43149 2961 aa13.92□□□□□ -0.18
SSPN-201ENST00000242729 NDUFS6O75380 124 aaKnown RBP13.92□□□□□ -0.18
SSPN-201ENST00000242729 ACTL6BO94805 426 aa13.92□□□□□ -0.18
SSPN-201ENST00000242729 ARL14EPLP0DKL9 152 aa13.92□□□□□ -0.18
SSPN-201ENST00000242729 ZNF474Q6S9Z5 364 aaPredicted RBP13.92□□□□□ -0.18
SSPN-201ENST00000242729 LYG1Q8N1E2 194 aa13.92□□□□□ -0.18
SSPN-201ENST00000242729 TMEM170AQ8WVE7 144 aa13.92□□□□□ -0.18
SSPN-201ENST00000242729 HIST1H2BLQ99880 126 aa13.92□□□□□ -0.18
SSPN-201ENST00000242729 ABCA1O95477 2261 aa13.92□□□□□ -0.18
SSPN-201ENST00000242729 ZGRF1Q86YA3 2104 aa13.92□□□□□ -0.18
SSPN-201ENST00000242729 MMP23AO75900 390 aa13.92□□□□□ -0.18
SSPN-201ENST00000242729 PFN1P07737 140 aaKnown RBP13.92□□□□□ -0.18
SSPN-201ENST00000242729 GNB1P62873 340 aa13.92□□□□□ -0.18
SSPN-201ENST00000242729 FAM78BQ5VT40 261 aa13.92□□□□□ -0.18
SSPN-201ENST00000242729 TREML4Q6UXN2 200 aa13.92□□□□□ -0.18
SSPN-201ENST00000242729 S1PR3Q99500 378 aa13.92□□□□□ -0.18
SSPN-201ENST00000242729 PLSCR4Q9NRQ2 329 aa13.92□□□□□ -0.18
SSPN-201ENST00000242729 PPP5D1E7EU14 171 aa13.91□□□□□ -0.18
SSPN-201ENST00000242729 HOXB1P14653 301 aaPredicted RBP13.91□□□□□ -0.18
SSPN-201ENST00000242729 THBS3P49746 956 aa13.91□□□□□ -0.18
SSPN-201ENST00000242729 FAM27E3Q08E93 113 aa13.91□□□□□ -0.18
SSPN-201ENST00000242729 PDLIM3Q53GG5 364 aaPredicted RBP13.91□□□□□ -0.18
SSPN-201ENST00000242729 PRR7Q8TB68 274 aa13.91□□□□□ -0.18
SSPN-201ENST00000242729 NEIL1Q96FI4 390 aaPredicted RBP13.91□□□□□ -0.18
SSPN-201ENST00000242729 CIB3Q96Q77 187 aaPredicted RBP13.91□□□□□ -0.18
SSPN-201ENST00000242729 IFI27L2Q9H2X8 130 aa13.91□□□□□ -0.18
SSPN-201ENST00000242729 TIMM9Q9Y5J7 89 aa13.91□□□□□ -0.18
SSPN-201ENST00000242729 PTPRBP23467 1997 aa13.91□□□□□ -0.18
SSPN-201ENST00000242729 PLXNB1O43157 2135 aa13.91□□□□□ -0.18
SSPN-201ENST00000242729 LOXL3P58215 753 aa13.91□□□□□ -0.18
SSPN-201ENST00000242729 FAM216BQ8N7L0 139 aa13.91□□□□□ -0.18
SSPN-201ENST00000242729 RND1Q92730 232 aa13.91□□□□□ -0.18
SSPN-201ENST00000242729 CCL13Q99616 98 aa13.91□□□□□ -0.18
SSPN-201ENST00000242729 MGST2Q99735 147 aa13.91□□□□□ -0.18
SSPN-201ENST00000242729 SLC25A15Q9Y619 301 aa13.91□□□□□ -0.18
SSPN-201ENST00000242729 XKRY2A2RUG3 117 aa13.9□□□□□ -0.18
SSPN-201ENST00000242729 SRRM5B3KS81 715 aa13.9□□□□□ -0.18
SSPN-201ENST00000242729 PHOX2AO14813 284 aa13.9□□□□□ -0.18
SSPN-201ENST00000242729 FOXH1O75593 365 aa13.9□□□□□ -0.18
SSPN-201ENST00000242729 ERVK-16P61578 105 aa13.9□□□□□ -0.18
SSPN-201ENST00000242729 ATP6V1FQ16864 119 aa13.9□□□□□ -0.18
SSPN-201ENST00000242729 CALYQ9NYX4 217 aa13.9□□□□□ -0.18
SSPN-201ENST00000242729 C17orf112F2Z3M2 114 aa13.9□□□□□ -0.18
SSPN-201ENST00000242729 IGLV1-44P01699 117 aa13.9□□□□□ -0.18
SSPN-201ENST00000242729 SNRPCP09234 159 aaKnown RBP13.9□□□□□ -0.18
SSPN-201ENST00000242729 GATA2P23769 480 aaPredicted RBP13.9□□□□□ -0.18
SSPN-201ENST00000242729 ACOT6Q3I5F7 207 aaPredicted RBP13.9□□□□□ -0.18
SSPN-201ENST00000242729 CT45A1Q5HYN5 189 aa13.9□□□□□ -0.18
SSPN-201ENST00000242729 ASPHD1Q5U4P2 390 aa13.9□□□□□ -0.18
SSPN-201ENST00000242729 CT45A3Q8NHU0 189 aa13.9□□□□□ -0.18
SSPN-201ENST00000242729 TRBV24-1A0A075B6N3 115 aa13.89□□□□□ -0.19
SSPN-201ENST00000242729 SAA2-SAA4A0A096LPE2 208 aa13.89□□□□□ -0.19
SSPN-201ENST00000242729 ADH4P08319 380 aa13.89□□□□□ -0.19
SSPN-201ENST00000242729 SAA2P0DJI9 122 aaPredicted RBP13.89□□□□□ -0.19
SSPN-201ENST00000242729 GNB2P62879 340 aa13.89□□□□□ -0.19
SSPN-201ENST00000242729 TCF23Q7RTU1 214 aa13.89□□□□□ -0.19
SSPN-201ENST00000242729 SEPSECSQ9HD40 501 aaKnown RBP13.89□□□□□ -0.19
SSPN-201ENST00000242729 PXMP4Q9Y6I8 212 aa13.89□□□□□ -0.19
SSPN-201ENST00000242729 HPRT1P00492 218 aa13.89□□□□□ -0.19
SSPN-201ENST00000242729 CGAP01215 116 aa13.89□□□□□ -0.19
SSPN-201ENST00000242729 CCL8P80075 99 aa13.89□□□□□ -0.19
SSPN-201ENST00000242729 MLANAQ16655 118 aa13.89□□□□□ -0.19
SSPN-201ENST00000242729 CENPVQ7Z7K6 275 aaPredicted RBP13.89□□□□□ -0.19
SSPN-201ENST00000242729 PRDM13Q9H4Q3 707 aa13.89□□□□□ -0.19
SSPN-201ENST00000242729 TMEM242Q9NWH2 141 aa13.89□□□□□ -0.19
SSPN-201ENST00000242729 WDR83OSQ9Y284 106 aa13.89□□□□□ -0.19
SSPN-201ENST00000242729 SCO2A0A1W2PP80 73 aa13.88□□□□□ -0.19
SSPN-201ENST00000242729 GFRA3O60609 400 aa13.88□□□□□ -0.19
SSPN-201ENST00000242729 MBP02144 154 aa13.88□□□□□ -0.19
SSPN-201ENST00000242729 KLF3P57682 345 aaPredicted RBP13.88□□□□□ -0.19
SSPN-201ENST00000242729 RELBQ01201 579 aa13.88□□□□□ -0.19
SSPN-201ENST00000242729 MBNL2Q5VZF2 373 aaKnown RBP13.88□□□□□ -0.19
SSPN-201ENST00000242729 PARD6GQ9BYG4 376 aaPredicted RBP13.88□□□□□ -0.19
SSPN-201ENST00000242729 TRBV20OR9-2A0A075B6H5 130 aa13.88□□□□□ -0.19
SSPN-201ENST00000242729 ZNF705GA8MUZ8 300 aaPredicted RBP13.88□□□□□ -0.19
SSPN-201ENST00000242729 MGST3O14880 152 aa13.88□□□□□ -0.19
SSPN-201ENST00000242729 MRPL37Q9BZE1 423 aaKnown RBP13.88□□□□□ -0.19
SSPN-201ENST00000242729 TCF19Q9Y242 345 aa13.88□□□□□ -0.19
SSPN-201ENST00000242729 IGHV3-48P01763 117 aa13.88□□□□□ -0.19
SSPN-201ENST00000242729 HTD2P86397 168 aa13.88□□□□□ -0.19
SSPN-201ENST00000242729 CTDSP1Q9GZU7 261 aa13.88□□□□□ -0.19
SSPN-201ENST00000242729 MANBALQ9NQG1 85 aa13.88□□□□□ -0.19
SSPN-201ENST00000242729 TLN1Q9Y490 2541 aaKnown RBP13.87□□□□□ -0.19
SSPN-201ENST00000242729 AHRRA9YTQ3 701 aa13.87□□□□□ -0.19
SSPN-201ENST00000242729 TMEM250H0YL14 139 aa13.87□□□□□ -0.19
SSPN-201ENST00000242729 RBFOX2O43251 390 aaKnown RBP eCLIP13.87□□□□□ -0.19
SSPN-201ENST00000242729 IGKV1-16P04430 117 aa13.87□□□□□ -0.19
SSPN-201ENST00000242729 REG1BP48304 166 aa13.87□□□□□ -0.19
SSPN-201ENST00000242729 FAM90A1Q86YD7 464 aa13.87□□□□□ -0.19
SSPN-201ENST00000242729 GGTLC1Q9BX51 225 aa13.87□□□□□ -0.19
SSPN-201ENST00000242729 FAM215AQ9Y5M1 114 aa13.87□□□□□ -0.19
SSPN-201ENST00000242729 DMRT1Q9Y5R6 373 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms