RNA–Protein interactions for RNA: ENST00000221847.5

EBI3-201, Transcript of Epstein-Barr virus induced 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBI3, Length 1,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-201ENST00000221847 MMD2Q8IY49 270 aa12.51□□□□□ -0.41
EBI3-201ENST00000221847 VSTM2AQ8TAG5 236 aa12.51□□□□□ -0.41
EBI3-201ENST00000221847 TMEM167AQ8TBQ9 72 aa12.51□□□□□ -0.41
EBI3-201ENST00000221847 MARCH1Q8TCQ1 289 aa12.51□□□□□ -0.41
EBI3-201ENST00000221847 CASTOR1Q8WTX7 329 aa12.51□□□□□ -0.41
EBI3-201ENST00000221847 TRIM63Q969Q1 353 aa12.51□□□□□ -0.41
EBI3-201ENST00000221847 MRGPRFQ96AM1 343 aa12.51□□□□□ -0.41
EBI3-201ENST00000221847 PLEKHA2Q9HB19 425 aa12.51□□□□□ -0.41
EBI3-201ENST00000221847 SLC2A9Q9NRM0 540 aa12.51□□□□□ -0.41
EBI3-201ENST00000221847 A6NHS1 94 aa12.5□□□□□ -0.41
EBI3-201ENST00000221847 MSGN1A6NI15 193 aa12.5□□□□□ -0.41
EBI3-201ENST00000221847 CREBL2O60519 120 aaPredicted RBP12.5□□□□□ -0.41
EBI3-201ENST00000221847 KBTBD11O94819 623 aa12.5□□□□□ -0.41
EBI3-201ENST00000221847 RPA2P15927 270 aa12.5□□□□□ -0.41
EBI3-201ENST00000221847 NQO2P16083 231 aa12.5□□□□□ -0.41
EBI3-201ENST00000221847 KIAA0141Q14154 515 aaPredicted RBP12.5□□□□□ -0.41
EBI3-201ENST00000221847 C10orf55Q5SWW7 151 aa12.5□□□□□ -0.41
EBI3-201ENST00000221847 OR4A47Q6IF82 309 aa12.5□□□□□ -0.41
EBI3-201ENST00000221847 TMEM65Q6PI78 240 aa12.5□□□□□ -0.41
EBI3-201ENST00000221847 ZNF695Q8IW36 515 aa12.5□□□□□ -0.41
EBI3-201ENST00000221847 TCTEX1D1Q8N7M0 179 aa12.5□□□□□ -0.41
EBI3-201ENST00000221847 KLHL30-AS1Q8NEE0 82 aa12.5□□□□□ -0.41
EBI3-201ENST00000221847 OR5T1Q8NG75 326 aa12.5□□□□□ -0.41
EBI3-201ENST00000221847 OR51S1Q8NGJ8 323 aa12.5□□□□□ -0.41
EBI3-201ENST00000221847 OR13C8Q8NGS7 320 aa12.5□□□□□ -0.41
EBI3-201ENST00000221847 ZFAND1Q8TCF1 268 aa12.5□□□□□ -0.41
EBI3-201ENST00000221847 SRSF12Q8WXF0 261 aaKnown RBP12.5□□□□□ -0.41
EBI3-201ENST00000221847 AIFM2Q9BRQ8 373 aa12.5□□□□□ -0.41
EBI3-201ENST00000221847 MPPED1O15442 326 aa12.49□□□□□ -0.41
EBI3-201ENST00000221847 ACTL6BO94805 426 aa12.49□□□□□ -0.41
EBI3-201ENST00000221847 APELAP0DMC3 54 aa12.49□□□□□ -0.41
EBI3-201ENST00000221847 CDX1P47902 265 aaPredicted RBP12.49□□□□□ -0.41
EBI3-201ENST00000221847 RAB9AP51151 201 aa12.49□□□□□ -0.41
EBI3-201ENST00000221847 PIGPP57054 158 aa12.49□□□□□ -0.41
EBI3-201ENST00000221847 RND3P61587 244 aa12.49□□□□□ -0.41
EBI3-201ENST00000221847 KLF9Q13886 244 aaPredicted RBP12.49□□□□□ -0.41
EBI3-201ENST00000221847 POU2AF1Q16633 256 aa12.49□□□□□ -0.41
EBI3-201ENST00000221847 ASPHD1Q5U4P2 390 aa12.49□□□□□ -0.41
EBI3-201ENST00000221847 C8orf86Q6ZUL3 223 aa12.49□□□□□ -0.41
EBI3-201ENST00000221847 DMBX1Q8NFW5 382 aa12.49□□□□□ -0.41
EBI3-201ENST00000221847 OR5M8Q8NGP6 311 aa12.49□□□□□ -0.41
EBI3-201ENST00000221847 MYOZ3Q8TDC0 251 aa12.49□□□□□ -0.41
EBI3-201ENST00000221847 ZNF486Q96H40 463 aaPredicted RBP12.49□□□□□ -0.41
EBI3-201ENST00000221847 PHB2Q99623 299 aa12.49□□□□□ -0.41
EBI3-201ENST00000221847 SRRQ9GZT4 340 aa12.49□□□□□ -0.41
EBI3-201ENST00000221847 HRASLSQ9HDD0 168 aa12.49□□□□□ -0.41
EBI3-201ENST00000221847 BET1LQ9NYM9 111 aa12.49□□□□□ -0.41
EBI3-201ENST00000221847 COMMD9Q9P000 198 aa12.49□□□□□ -0.41
EBI3-201ENST00000221847 TRAV3A0A0B4J244 114 aa12.48□□□□□ -0.41
EBI3-201ENST00000221847 MYOD1P15172 320 aa12.48□□□□□ -0.41
EBI3-201ENST00000221847 ZNF491Q8N8L2 437 aa12.48□□□□□ -0.41
EBI3-201ENST00000221847 OR4A5Q8NH83 315 aa12.48□□□□□ -0.41
EBI3-201ENST00000221847 MS4A10Q96PG2 267 aa12.48□□□□□ -0.41
EBI3-201ENST00000221847 PRRT1Q99946 306 aa12.48□□□□□ -0.41
EBI3-201ENST00000221847 TMEM140Q9NV12 185 aa12.48□□□□□ -0.41
EBI3-201ENST00000221847 MCUBQ9NWR8 336 aa12.48□□□□□ -0.41
EBI3-201ENST00000221847 UPK2O00526 184 aa12.47□□□□□ -0.41
EBI3-201ENST00000221847 KRASP01116 189 aa12.47□□□□□ -0.41
EBI3-201ENST00000221847 PF4P02776 101 aa12.47□□□□□ -0.41
EBI3-201ENST00000221847 CTSDP07339 412 aaPredicted RBP12.47□□□□□ -0.41
EBI3-201ENST00000221847 IL6RP08887 468 aaPredicted RBP12.47□□□□□ -0.41
EBI3-201ENST00000221847 MAS1LP35410 378 aa12.47□□□□□ -0.41
EBI3-201ENST00000221847 G6PCP35575 357 aa12.47□□□□□ -0.41
EBI3-201ENST00000221847 ECI1P42126 302 aa12.47□□□□□ -0.41
EBI3-201ENST00000221847 ERVK-16P61578 105 aa12.47□□□□□ -0.41
EBI3-201ENST00000221847 RPL8P62917 257 aaKnown RBP12.47□□□□□ -0.41
EBI3-201ENST00000221847 ETV3LQ6ZN32 361 aa12.47□□□□□ -0.41
EBI3-201ENST00000221847 TOMM5Q8N4H5 51 aa12.47□□□□□ -0.41
EBI3-201ENST00000221847 TMEM68Q96MH6 324 aa12.47□□□□□ -0.41
EBI3-201ENST00000221847 DUX3Q96PT4 197 aa12.47□□□□□ -0.41
EBI3-201ENST00000221847 RTBDNQ9BSG5 229 aaPredicted RBP12.47□□□□□ -0.41
EBI3-201ENST00000221847 GNB4Q9HAV0 340 aa12.47□□□□□ -0.41
EBI3-201ENST00000221847 ZNF355PQ9NSJ1 428 aa12.47□□□□□ -0.41
EBI3-201ENST00000221847 FAM212BQ9NTI7 297 aaPredicted RBP12.47□□□□□ -0.41
EBI3-201ENST00000221847 SLC2A8Q9NY64 477 aa12.47□□□□□ -0.41
EBI3-201ENST00000221847 COPZ2Q9P299 210 aa12.47□□□□□ -0.41
EBI3-201ENST00000221847 SCP2D1Q9UJQ7 156 aa12.47□□□□□ -0.41
EBI3-201ENST00000221847 HMX3A6NHT5 357 aa12.46□□□□□ -0.41
EBI3-201ENST00000221847 MARCH11A6NNE9 402 aa12.46□□□□□ -0.41
EBI3-201ENST00000221847 E7EUB6 86 aa12.46□□□□□ -0.41
EBI3-201ENST00000221847 IGKV1-39P01597 117 aa12.46□□□□□ -0.41
EBI3-201ENST00000221847 IGKV1D-39P04432 117 aa12.46□□□□□ -0.41
EBI3-201ENST00000221847 HLA-GP17693 338 aa12.46□□□□□ -0.41
EBI3-201ENST00000221847 SLC6A1P30531 599 aa12.46□□□□□ -0.41
EBI3-201ENST00000221847 RPL27AP46776 148 aaKnown RBP12.46□□□□□ -0.41
EBI3-201ENST00000221847 AP3S2P59780 193 aa12.46□□□□□ -0.41
EBI3-201ENST00000221847 SURF2Q15527 256 aaPredicted RBP12.46□□□□□ -0.41
EBI3-201ENST00000221847 DEFB136Q30KP8 78 aa12.46□□□□□ -0.41
EBI3-201ENST00000221847 CNPY1Q3B7I2 92 aa12.46□□□□□ -0.41
EBI3-201ENST00000221847 CCDC71LQ8N9Z2 235 aa12.46□□□□□ -0.41
EBI3-201ENST00000221847 UBE2E2Q96LR5 201 aa12.46□□□□□ -0.41
EBI3-201ENST00000221847 OR5B12Q96R08 314 aa12.46□□□□□ -0.41
EBI3-201ENST00000221847 TP53RKQ96S44 253 aa12.46□□□□□ -0.41
EBI3-201ENST00000221847 SDHCQ99643 169 aaPredicted RBP12.46□□□□□ -0.41
EBI3-201ENST00000221847 SPIN2AQ99865 258 aa12.46□□□□□ -0.41
EBI3-201ENST00000221847 SPIN2BQ9BPZ2 258 aa12.46□□□□□ -0.41
EBI3-201ENST00000221847 GPR132Q9UNW8 380 aa12.46□□□□□ -0.41
EBI3-201ENST00000221847 C14orf166Q9Y224 244 aaKnown RBP12.46□□□□□ -0.41
EBI3-201ENST00000221847 VSIG4Q9Y279 399 aa12.46□□□□□ -0.41
EBI3-201ENST00000221847 A0A1B0GW64 132 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 236 ms