RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 TMEM222Q9H0R3 208 aa18.62■□□□□ 0.57
HOMER3-201ENST00000221222 ZNF430Q9H8G1 570 aaPredicted RBP18.62■□□□□ 0.57
HOMER3-201ENST00000221222 OR5AC1P0C628 307 aa18.61■□□□□ 0.57
HOMER3-201ENST00000221222 AKR1C4P17516 323 aa18.61■□□□□ 0.57
HOMER3-201ENST00000221222 ERVK-16P61578 105 aa18.61■□□□□ 0.57
HOMER3-201ENST00000221222 SUPT4H1P63272 117 aaKnown RBP18.61■□□□□ 0.57
HOMER3-201ENST00000221222 NDPQ00604 133 aa18.61■□□□□ 0.57
HOMER3-201ENST00000221222 SP6Q3SY56 376 aa18.61■□□□□ 0.57
HOMER3-201ENST00000221222 TMEM128Q5BJH2 165 aa18.61■□□□□ 0.57
HOMER3-201ENST00000221222 MZT2BQ6NZ67 158 aa18.61■□□□□ 0.57
HOMER3-201ENST00000221222 MMD2Q8IY49 270 aa18.61■□□□□ 0.57
HOMER3-201ENST00000221222 CENPSQ8N2Z9 138 aa18.61■□□□□ 0.57
HOMER3-201ENST00000221222 KLHDC1Q8N7A1 406 aa18.61■□□□□ 0.57
HOMER3-201ENST00000221222 GLYATL2Q8WU03 294 aa18.61■□□□□ 0.57
HOMER3-201ENST00000221222 TSC22D3Q99576 134 aa18.61■□□□□ 0.57
HOMER3-201ENST00000221222 TMEM140Q9NV12 185 aa18.61■□□□□ 0.57
HOMER3-201ENST00000221222 ATP6V0E1O15342 81 aa18.6■□□□□ 0.57
HOMER3-201ENST00000221222 KRASP01116 189 aa18.6■□□□□ 0.57
HOMER3-201ENST00000221222 FGF2P09038 288 aa18.6■□□□□ 0.57
HOMER3-201ENST00000221222 CRIP2P52943 208 aaPredicted RBP18.6■□□□□ 0.57
HOMER3-201ENST00000221222 DHODHQ02127 395 aa18.6■□□□□ 0.57
HOMER3-201ENST00000221222 STPG2Q8N412 459 aa18.6■□□□□ 0.57
HOMER3-201ENST00000221222 DMBX1Q8NFW5 382 aa18.6■□□□□ 0.57
HOMER3-201ENST00000221222 CHPT1Q8WUD6 406 aa18.6■□□□□ 0.57
HOMER3-201ENST00000221222 SEC22AQ96IW7 307 aa18.6■□□□□ 0.57
HOMER3-201ENST00000221222 NOL4LQ96MY1 436 aaPredicted RBP18.6■□□□□ 0.57
HOMER3-201ENST00000221222 KCNIP3Q9Y2W7 256 aa18.6■□□□□ 0.57
HOMER3-201ENST00000221222 ARPC1BO15143 372 aaKnown RBP18.59■□□□□ 0.57
HOMER3-201ENST00000221222 CDS2O95674 445 aa18.59■□□□□ 0.57
HOMER3-201ENST00000221222 G6PCP35575 357 aa18.59■□□□□ 0.57
HOMER3-201ENST00000221222 SLC25A42Q86VD7 318 aa18.59■□□□□ 0.57
HOMER3-201ENST00000221222 ARPC1AQ92747 370 aa18.59■□□□□ 0.57
HOMER3-201ENST00000221222 PARP11Q9NR21 331 aa18.59■□□□□ 0.57
HOMER3-201ENST00000221222 FBXO7Q9Y3I1 522 aa18.59■□□□□ 0.57
HOMER3-201ENST00000221222 EGR2P11161 476 aaPredicted RBP18.58■□□□□ 0.57
HOMER3-201ENST00000221222 UBE2MP61081 183 aaKnown RBP18.58■□□□□ 0.57
HOMER3-201ENST00000221222 FXYD3Q14802 87 aa18.58■□□□□ 0.57
HOMER3-201ENST00000221222 TRIM16LQ309B1 348 aa18.58■□□□□ 0.57
HOMER3-201ENST00000221222 ZNF747Q9BV97 191 aa18.58■□□□□ 0.57
HOMER3-201ENST00000221222 GON7Q9BXV9 100 aa18.58■□□□□ 0.57
HOMER3-201ENST00000221222 LINC00527Q9UJ94 153 aa18.58■□□□□ 0.57
HOMER3-201ENST00000221222 FLVCR2Q9UPI3 526 aa18.58■□□□□ 0.57
HOMER3-201ENST00000221222 UPK2O00526 184 aa18.57■□□□□ 0.56
HOMER3-201ENST00000221222 CNIH1O95406 144 aa18.57■□□□□ 0.56
HOMER3-201ENST00000221222 TCRBP04435 133 aa18.57■□□□□ 0.56
HOMER3-201ENST00000221222 MAS1LP35410 378 aa18.57■□□□□ 0.56
HOMER3-201ENST00000221222 GNB1P62873 340 aa18.57■□□□□ 0.56
HOMER3-201ENST00000221222 TMEM187Q14656 261 aa18.57■□□□□ 0.56
HOMER3-201ENST00000221222 TNXAQ16473 311 aa18.57■□□□□ 0.56
HOMER3-201ENST00000221222 SGMS2Q8NHU3 365 aa18.57■□□□□ 0.56
HOMER3-201ENST00000221222 TMEM56Q96MV1 263 aa18.57■□□□□ 0.56
HOMER3-201ENST00000221222 TMEM56-RWDD3S4R434 201 aa18.57■□□□□ 0.56
HOMER3-201ENST00000221222 FAM240BA0A1B0GVZ2 78 aa18.56■□□□□ 0.56
HOMER3-201ENST00000221222 ATG12O94817 140 aa18.56■□□□□ 0.56
HOMER3-201ENST00000221222 ANXA3P12429 323 aa18.56■□□□□ 0.56
HOMER3-201ENST00000221222 KRTAP10-3P60369 221 aa18.56■□□□□ 0.56
HOMER3-201ENST00000221222 RPL8P62917 257 aaKnown RBP18.56■□□□□ 0.56
HOMER3-201ENST00000221222 C19orf54Q5BKX5 351 aa18.56■□□□□ 0.56
HOMER3-201ENST00000221222 CENPVQ7Z7K6 275 aaPredicted RBP18.56■□□□□ 0.56
HOMER3-201ENST00000221222 C20orf85Q9H1P6 137 aa18.56■□□□□ 0.56
HOMER3-201ENST00000221222 NUBP2Q9Y5Y2 271 aa18.56■□□□□ 0.56
HOMER3-201ENST00000221222 MGAM2Q2M2H8 2515 aa18.56■□□□□ 0.56
HOMER3-201ENST00000221222 TRAV3A0A0B4J244 114 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 PSMB11A5LHX3 300 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 ACTL6BO94805 426 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 VDAC1P21796 283 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 DEFA1P59665 94 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 DEFA3P59666 94 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 CFHR3Q02985 330 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 GRPEL2Q8TAA5 225 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 LHFPL5Q8TAF8 219 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 RBPMSQ93062 196 aaKnown RBP18.55■□□□□ 0.56
HOMER3-201ENST00000221222 IL22RA2Q969J5 263 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 TRAV41A0A0B4J266 112 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 IGKV1-5P01602 117 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 P0C879 139 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 HLA-GP17693 338 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 SLC35B1P78383 322 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 SRPXP78539 464 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 PPP1R1AQ13522 171 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 AKIRIN2Q53H80 203 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 H2BFWTQ7Z2G1 175 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 SELENOHQ8IZQ5 122 aaKnown RBP18.55■□□□□ 0.56
HOMER3-201ENST00000221222 OR5AU1Q8NGC0 362 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 ABHD5Q8WTS1 349 aa18.55■□□□□ 0.56
HOMER3-201ENST00000221222 SRSF12Q8WXF0 261 aaKnown RBP18.55■□□□□ 0.56
HOMER3-201ENST00000221222 FAM103A1Q9BTL3 118 aaKnown RBP18.55■□□□□ 0.56
HOMER3-201ENST00000221222 G3V318 75 aa18.54■□□□□ 0.56
HOMER3-201ENST00000221222 SFT2D2O95562 160 aa18.54■□□□□ 0.56
HOMER3-201ENST00000221222 OR9G9P0C7N8 305 aa18.54■□□□□ 0.56
HOMER3-201ENST00000221222 VAMP1P23763 118 aa18.54■□□□□ 0.56
HOMER3-201ENST00000221222 AKR1C2P52895 323 aa18.54■□□□□ 0.56
HOMER3-201ENST00000221222 TMEM267Q0VDI3 215 aaPredicted RBP18.54■□□□□ 0.56
HOMER3-201ENST00000221222 TMEM268Q5VZI3 342 aa18.54■□□□□ 0.56
HOMER3-201ENST00000221222 ZNF695Q8IW36 515 aa18.54■□□□□ 0.56
HOMER3-201ENST00000221222 CITED1Q99966 193 aa18.54■□□□□ 0.56
HOMER3-201ENST00000221222 ALX4Q9H161 411 aaPredicted RBP18.54■□□□□ 0.56
HOMER3-201ENST00000221222 NUDT15Q9NV35 164 aa18.54■□□□□ 0.56
HOMER3-201ENST00000221222 WSB1Q9Y6I7 421 aa18.54■□□□□ 0.56
HOMER3-201ENST00000221222 OR4E1P0C645 316 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms