RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 COL6A6A6NMZ7 2263 aa24.24■■□□□ 1.47
PABPN1-201ENST00000216727 LYNX1G3V0Z9 82 aa24.23■■□□□ 1.47
PABPN1-201ENST00000216727 J3QR06 171 aa24.23■■□□□ 1.47
PABPN1-201ENST00000216727 IGHV2-70P01814 119 aa24.23■■□□□ 1.47
PABPN1-201ENST00000216727 IGKV1-16P04430 117 aa24.23■■□□□ 1.47
PABPN1-201ENST00000216727 LYNX1P0DP58 116 aa24.23■■□□□ 1.47
PABPN1-201ENST00000216727 RALYQ9UKM9 306 aaKnown RBP24.23■■□□□ 1.47
PABPN1-201ENST00000216727 IFNA10P01566 189 aa24.23■■□□□ 1.47
PABPN1-201ENST00000216727 OR5AN1Q8NGI8 311 aa24.23■■□□□ 1.47
PABPN1-201ENST00000216727 TMEM186Q96B77 213 aa24.23■■□□□ 1.47
PABPN1-201ENST00000216727 RARRES2Q99969 163 aa24.23■■□□□ 1.47
PABPN1-201ENST00000216727 MRPL20Q9BYC9 149 aaKnown RBP24.23■■□□□ 1.47
PABPN1-201ENST00000216727 FGF7P21781 194 aa24.22■■□□□ 1.47
PABPN1-201ENST00000216727 CLRN3Q8NCR9 226 aa24.22■■□□□ 1.47
PABPN1-201ENST00000216727 GGACTQ9BVM4 153 aa24.22■■□□□ 1.47
PABPN1-201ENST00000216727 PRNDQ9UKY0 176 aa24.22■■□□□ 1.47
PABPN1-201ENST00000216727 CACNA1AO00555 2505 aa24.22■■□□□ 1.47
PABPN1-201ENST00000216727 APOA2P02652 100 aa24.22■■□□□ 1.47
PABPN1-201ENST00000216727 RPS16P62249 146 aaKnown RBP24.22■■□□□ 1.47
PABPN1-201ENST00000216727 ZNF726P1Q15940 193 aa24.22■■□□□ 1.47
PABPN1-201ENST00000216727 OR10X1Q8NGY0 326 aa24.22■■□□□ 1.47
PABPN1-201ENST00000216727 OSR1Q8TAX0 266 aaPredicted RBP24.22■■□□□ 1.47
PABPN1-201ENST00000216727 RCC1LQ96I51 464 aaKnown RBP24.22■■□□□ 1.47
PABPN1-201ENST00000216727 RAB1BQ9H0U4 201 aa24.22■■□□□ 1.47
PABPN1-201ENST00000216727 CBLN4Q9NTU7 201 aa24.22■■□□□ 1.47
PABPN1-201ENST00000216727 TET2Q6N021 2002 aaPredicted RBP24.21■■□□□ 1.47
PABPN1-201ENST00000216727 ABCA4P78363 2273 aa24.21■■□□□ 1.47
PABPN1-201ENST00000216727 IGHV1-8P0DP01 117 aa24.21■■□□□ 1.47
PABPN1-201ENST00000216727 HOXA1P49639 335 aaPredicted RBP24.21■■□□□ 1.47
PABPN1-201ENST00000216727 ZNF137PP52743 207 aa24.21■■□□□ 1.47
PABPN1-201ENST00000216727 ZNF841Q6ZN19 808 aa24.21■■□□□ 1.47
PABPN1-201ENST00000216727 C11orf42Q8N5U0 333 aa24.21■■□□□ 1.47
PABPN1-201ENST00000216727 OR9G1Q8NH87 305 aa24.21■■□□□ 1.47
PABPN1-201ENST00000216727 CLDND2Q8NHS1 167 aa24.21■■□□□ 1.47
PABPN1-201ENST00000216727 ZNF257Q9Y2Q1 563 aa24.21■■□□□ 1.47
PABPN1-201ENST00000216727 ITPR1Q14643 2758 aa24.21■■□□□ 1.47
PABPN1-201ENST00000216727 H0YJW9 148 aa24.2■■□□□ 1.47
PABPN1-201ENST00000216727 ZNF506Q5JVG8 444 aa24.2■■□□□ 1.47
PABPN1-201ENST00000216727 NPCDR1Q9BY65 106 aa24.2■■□□□ 1.47
PABPN1-201ENST00000216727 SRRM4A7MD48 611 aaKnown RBP24.2■■□□□ 1.46
PABPN1-201ENST00000216727 UPK2O00526 184 aa24.2■■□□□ 1.46
PABPN1-201ENST00000216727 MBP02144 154 aa24.2■■□□□ 1.46
PABPN1-201ENST00000216727 ETV3LQ6ZN32 361 aa24.2■■□□□ 1.46
PABPN1-201ENST00000216727 ST6GALNAC6Q969X2 333 aa24.2■■□□□ 1.46
PABPN1-201ENST00000216727 BET1LQ9NYM9 111 aa24.2■■□□□ 1.46
PABPN1-201ENST00000216727 ELLP55199 621 aaPredicted RBP24.19■■□□□ 1.46
PABPN1-201ENST00000216727 C11orf71Q6IPW1 123 aa24.19■■□□□ 1.46
PABPN1-201ENST00000216727 PRSS46E5RG02 174 aa24.18■■□□□ 1.46
PABPN1-201ENST00000216727 RRHO14718 337 aa24.18■■□□□ 1.46
PABPN1-201ENST00000216727 CD1BP29016 333 aa24.18■■□□□ 1.46
PABPN1-201ENST00000216727 WDR83OSQ9Y284 106 aa24.18■■□□□ 1.46
PABPN1-201ENST00000216727 OR51B2Q9Y5P1 312 aa24.18■■□□□ 1.46
PABPN1-201ENST00000216727 RAB11AP62491 216 aa24.18■■□□□ 1.46
PABPN1-201ENST00000216727 TMEM177Q53S58 311 aa24.18■■□□□ 1.46
PABPN1-201ENST00000216727 ZNF787Q6DD87 383 aa24.18■■□□□ 1.46
PABPN1-201ENST00000216727 ACSM6Q6P461 480 aa24.18■■□□□ 1.46
PABPN1-201ENST00000216727 ABHD12Q8N2K0 398 aa24.18■■□□□ 1.46
PABPN1-201ENST00000216727 TMEM170AQ8WVE7 144 aa24.18■■□□□ 1.46
PABPN1-201ENST00000216727 TPRP12270 2363 aaKnown RBP24.17■■□□□ 1.46
PABPN1-201ENST00000216727 HSPB1P04792 205 aaKnown RBP24.17■■□□□ 1.46
PABPN1-201ENST00000216727 ICAM4Q14773 271 aa24.17■■□□□ 1.46
PABPN1-201ENST00000216727 HAGHQ16775 308 aa24.17■■□□□ 1.46
PABPN1-201ENST00000216727 ZNF709Q8N972 641 aa24.17■■□□□ 1.46
PABPN1-201ENST00000216727 TMEM133Q9H2Q1 129 aa24.17■■□□□ 1.46
PABPN1-201ENST00000216727 C17orf112F2Z3M2 114 aa24.17■■□□□ 1.46
PABPN1-201ENST00000216727 KHDC3LQ587J8 217 aa24.17■■□□□ 1.46
PABPN1-201ENST00000216727 SSX7Q7RTT5 188 aa24.17■■□□□ 1.46
PABPN1-201ENST00000216727 RPP25LQ8N5L8 163 aaKnown RBP24.17■■□□□ 1.46
PABPN1-201ENST00000216727 NABP2Q9BQ15 211 aa24.17■■□□□ 1.46
PABPN1-201ENST00000216727 UNKLQ9H9P5 680 aaKnown RBP24.17■■□□□ 1.46
PABPN1-201ENST00000216727 ENY2Q9NPA8 101 aa24.17■■□□□ 1.46
PABPN1-201ENST00000216727 FKBP11Q9NYL4 201 aa24.17■■□□□ 1.46
PABPN1-201ENST00000216727 KBTBD11O94819 623 aa24.16■■□□□ 1.46
PABPN1-201ENST00000216727 TMEM88Q6PEY1 159 aa24.16■■□□□ 1.46
PABPN1-201ENST00000216727 LCN15Q6UWW0 184 aa24.16■■□□□ 1.46
PABPN1-201ENST00000216727 TNFRSF14Q92956 283 aa24.16■■□□□ 1.46
PABPN1-201ENST00000216727 H7C2Y5 167 aa24.15■■□□□ 1.46
PABPN1-201ENST00000216727 MPDU1O75352 247 aa24.15■■□□□ 1.46
PABPN1-201ENST00000216727 IGKV1D-33P01593 117 aa24.15■■□□□ 1.46
PABPN1-201ENST00000216727 IGKV1-33P01594 117 aa24.15■■□□□ 1.46
PABPN1-201ENST00000216727 SAA1P0DJI8 122 aaPredicted RBP24.15■■□□□ 1.46
PABPN1-201ENST00000216727 DLK1P80370 383 aa24.15■■□□□ 1.46
PABPN1-201ENST00000216727 PDPNQ86YL7 162 aa24.15■■□□□ 1.46
PABPN1-201ENST00000216727 PCGF1Q9BSM1 259 aa24.15■■□□□ 1.46
PABPN1-201ENST00000216727 TMEM8BA6NDV4 472 aa24.15■■□□□ 1.46
PABPN1-201ENST00000216727 SOX15O60248 233 aa24.15■■□□□ 1.46
PABPN1-201ENST00000216727 PRCDQ00LT1 54 aa24.15■■□□□ 1.46
PABPN1-201ENST00000216727 C4orf17Q53FE4 359 aa24.15■■□□□ 1.46
PABPN1-201ENST00000216727 SOHLH1Q5JUK2 328 aa24.15■■□□□ 1.46
PABPN1-201ENST00000216727 SLC24A4Q8NFF2 622 aa24.15■■□□□ 1.46
PABPN1-201ENST00000216727 HIVEP3Q5T1R4 2406 aa24.14■■□□□ 1.46
PABPN1-201ENST00000216727 A0A1W2PPH5 198 aa24.14■■□□□ 1.45
PABPN1-201ENST00000216727 SRP19P09132 144 aaKnown RBP24.14■■□□□ 1.45
PABPN1-201ENST00000216727 OR13C7P0DN81 318 aa24.14■■□□□ 1.45
PABPN1-201ENST00000216727 PMS2P11Q13670 270 aa24.14■■□□□ 1.45
PABPN1-201ENST00000216727 CBLN2Q8IUK8 224 aa24.14■■□□□ 1.45
PABPN1-201ENST00000216727 Q8N7P7 452 aa24.14■■□□□ 1.45
PABPN1-201ENST00000216727 OR4C13Q8NGP0 309 aa24.14■■□□□ 1.45
PABPN1-201ENST00000216727 NEU4Q8WWR8 484 aaPredicted RBP24.14■■□□□ 1.45
PABPN1-201ENST00000216727 LHX4Q969G2 390 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms