RNA–Protein interactions for RNA: ENST00000003302.8

USP28-201, Transcript of ubiquitin specific peptidase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP28, Length 4,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-201ENST00000003302 CBLN1P23435 193 aa8.83□□□□□ -1
USP28-201ENST00000003302 MORN5Q5VZ52 161 aa8.83□□□□□ -1
USP28-201ENST00000003302 OR10P1Q8NGE3 313 aa8.83□□□□□ -1
USP28-201ENST00000003302 CBLN4Q9NTU7 201 aa8.83□□□□□ -1
USP28-201ENST00000003302 DUTP33316 252 aaKnown RBP8.83□□□□□ -1
USP28-201ENST00000003302 TRIP6Q15654 476 aaKnown RBP8.83□□□□□ -1
USP28-201ENST00000003302 ARSJQ5FYB0 599 aaPredicted RBP8.83□□□□□ -1
USP28-201ENST00000003302 H2BFWTQ7Z2G1 175 aa8.83□□□□□ -1
USP28-201ENST00000003302 OR2Z1Q8NG97 314 aa8.83□□□□□ -1
USP28-201ENST00000003302 CTXND1A0A1B0GTU2 59 aa8.82□□□□□ -1
USP28-201ENST00000003302 ACTL6BO94805 426 aa8.82□□□□□ -1
USP28-201ENST00000003302 SEM1Q6ZVN7 128 aa8.82□□□□□ -1
USP28-201ENST00000003302 DEFB108BQ8NET1 73 aa8.82□□□□□ -1
USP28-201ENST00000003302 OCC1Q8TAD7 63 aa8.82□□□□□ -1
USP28-201ENST00000003302 TMEM242Q9NWH2 141 aa8.82□□□□□ -1
USP28-201ENST00000003302 C19orf67A6NJJ6 358 aa8.82□□□□□ -1
USP28-201ENST00000003302 A8MWP6 167 aa8.82□□□□□ -1
USP28-201ENST00000003302 IQCF6A8MYZ5 107 aa8.82□□□□□ -1
USP28-201ENST00000003302 PRSS46E5RG02 174 aa8.82□□□□□ -1
USP28-201ENST00000003302 E7EUB6 86 aa8.82□□□□□ -1
USP28-201ENST00000003302 IGKV1-16P04430 117 aa8.82□□□□□ -1
USP28-201ENST00000003302 Q71RC1 249 aaPredicted RBP8.82□□□□□ -1
USP28-201ENST00000003302 LRRC29Q8WV35 223 aa8.82□□□□□ -1
USP28-201ENST00000003302 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.82□□□□□ -1
USP28-201ENST00000003302 CD46P15529 392 aa8.82□□□□□ -1
USP28-201ENST00000003302 JOSD1Q15040 202 aaPredicted RBP8.82□□□□□ -1
USP28-201ENST00000003302 DPPA3Q6W0C5 159 aa8.82□□□□□ -1
USP28-201ENST00000003302 CENPVQ7Z7K6 275 aaPredicted RBP8.82□□□□□ -1
USP28-201ENST00000003302 R3HDM4Q96D70 268 aa8.82□□□□□ -1
USP28-201ENST00000003302 STRADBQ9C0K7 418 aa8.82□□□□□ -1
USP28-201ENST00000003302 TMEM30CPA0ZSE6 113 aa8.81□□□□□ -1
USP28-201ENST00000003302 PPP5D1E7EU14 171 aa8.81□□□□□ -1
USP28-201ENST00000003302 M0R1X1 148 aa8.81□□□□□ -1
USP28-201ENST00000003302 CDKN1AP38936 164 aa8.81□□□□□ -1
USP28-201ENST00000003302 CDC34P49427 236 aaPredicted RBP8.81□□□□□ -1
USP28-201ENST00000003302 UBE2NP61088 152 aaKnown RBP8.81□□□□□ -1
USP28-201ENST00000003302 PNRC1Q12796 327 aaPredicted RBP8.81□□□□□ -1
USP28-201ENST00000003302 GCSAMQ8N6F7 178 aa8.81□□□□□ -1
USP28-201ENST00000003302 ZDHHC11Q9H8X9 412 aa8.81□□□□□ -1
USP28-201ENST00000003302 DKK4Q9UBT3 224 aa8.81□□□□□ -1
USP28-201ENST00000003302 NCOR2Q9Y618 2525 aa8.81□□□□□ -1
USP28-201ENST00000003302 K7EM74 188 aa8.81□□□□□ -1
USP28-201ENST00000003302 TIMM8AO60220 97 aaPredicted RBP8.81□□□□□ -1
USP28-201ENST00000003302 FCN3O75636 299 aa8.81□□□□□ -1
USP28-201ENST00000003302 CA1P00915 261 aaPredicted RBP8.81□□□□□ -1
USP28-201ENST00000003302 IGHEP01854 428 aa8.81□□□□□ -1
USP28-201ENST00000003302 CD1BP29016 333 aa8.81□□□□□ -1
USP28-201ENST00000003302 TIMP3P35625 211 aa8.81□□□□□ -1
USP28-201ENST00000003302 PSMB3P49720 205 aa8.81□□□□□ -1
USP28-201ENST00000003302 TNFSF10P50591 281 aa8.81□□□□□ -1
USP28-201ENST00000003302 LOXL3P58215 753 aa8.81□□□□□ -1
USP28-201ENST00000003302 C19orf35Q6ZS72 473 aa8.81□□□□□ -1
USP28-201ENST00000003302 TGIF2LXQ8IUE1 241 aa8.81□□□□□ -1
USP28-201ENST00000003302 DEFB123Q8N688 67 aa8.81□□□□□ -1
USP28-201ENST00000003302 LINC00479Q96M42 142 aa8.81□□□□□ -1
USP28-201ENST00000003302 TAAR6Q96RI8 345 aa8.81□□□□□ -1
USP28-201ENST00000003302 TMEM147Q9BVK8 224 aa8.81□□□□□ -1
USP28-201ENST00000003302 PPIAL4AQ9Y536 164 aa8.81□□□□□ -1
USP28-201ENST00000003302 UTP20O75691 2785 aaKnown RBP8.81□□□□□ -1
USP28-201ENST00000003302 IGHV1-18A0A0C4DH31 117 aa8.81□□□□□ -1
USP28-201ENST00000003302 DVL1O14640 695 aa8.81□□□□□ -1
USP28-201ENST00000003302 GFRA3O60609 400 aa8.81□□□□□ -1
USP28-201ENST00000003302 RPL15P61313 204 aaKnown RBP8.81□□□□□ -1
USP28-201ENST00000003302 ACTL10Q5JWF8 245 aa8.81□□□□□ -1
USP28-201ENST00000003302 LINC00596Q86U02 117 aa8.81□□□□□ -1
USP28-201ENST00000003302 UBALD2Q8IYN6 164 aa8.81□□□□□ -1
USP28-201ENST00000003302 SGMS2Q8NHU3 365 aa8.81□□□□□ -1
USP28-201ENST00000003302 CLCF1Q9UBD9 225 aa8.81□□□□□ -1
USP28-201ENST00000003302 TP73-AS1Q9UF72 201 aa8.81□□□□□ -1
USP28-201ENST00000003302 PITPNC1Q9UKF7 332 aa8.81□□□□□ -1
USP28-201ENST00000003302 MALRD1Q5VYJ5 2156 aa8.81□□□□□ -1
USP28-201ENST00000003302 SRRM4A7MD48 611 aaKnown RBP8.81□□□□□ -1
USP28-201ENST00000003302 IFNA10P01566 189 aa8.81□□□□□ -1
USP28-201ENST00000003302 IGKV3-15P01624 115 aa8.81□□□□□ -1
USP28-201ENST00000003302 ADMP35318 185 aa8.81□□□□□ -1
USP28-201ENST00000003302 KIAA1644Q3SXP7 199 aa8.81□□□□□ -1
USP28-201ENST00000003302 NHLRC2Q8NBF2 726 aa8.81□□□□□ -1
USP28-201ENST00000003302 P2RX4Q99571 388 aa8.81□□□□□ -1
USP28-201ENST00000003302 GGTLC1Q9BX51 225 aa8.81□□□□□ -1
USP28-201ENST00000003302 HINT2Q9BX68 163 aa8.81□□□□□ -1
USP28-201ENST00000003302 POLDIP2Q9Y2S7 368 aa8.81□□□□□ -1
USP28-201ENST00000003302 SPTBN4Q9H254 2564 aa8.81□□□□□ -1
USP28-201ENST00000003302 COL6A6A6NMZ7 2263 aa8.81□□□□□ -1
USP28-201ENST00000003302 ZNF320A2RRD8 509 aa8.8□□□□□ -1
USP28-201ENST00000003302 B4DEV8 164 aa8.8□□□□□ -1
USP28-201ENST00000003302 HRASP01112 189 aa8.8□□□□□ -1
USP28-201ENST00000003302 S100GP29377 79 aa8.8□□□□□ -1
USP28-201ENST00000003302 SSBP2P81877 361 aaPredicted RBP8.8□□□□□ -1
USP28-201ENST00000003302 FAM90A1Q86YD7 464 aa8.8□□□□□ -1
USP28-201ENST00000003302 IFI27L2Q9H2X8 130 aa8.8□□□□□ -1
USP28-201ENST00000003302 RAC2P15153 192 aa8.8□□□□□ -1
USP28-201ENST00000003302 PAX1P15863 534 aa8.8□□□□□ -1
USP28-201ENST00000003302 IGFBPL1Q8WX77 278 aa8.8□□□□□ -1
USP28-201ENST00000003302 GNG10P50151 68 aa8.8□□□□□ -1
USP28-201ENST00000003302 MORN2Q502X0 79 aa8.8□□□□□ -1
USP28-201ENST00000003302 SLC35E4Q6ICL7 350 aa8.8□□□□□ -1
USP28-201ENST00000003302 FAM214BQ7L5A3 538 aa8.8□□□□□ -1
USP28-201ENST00000003302 OR2T10Q8NGZ9 312 aa8.8□□□□□ -1
USP28-201ENST00000003302 GNG12Q9UBI6 72 aa8.8□□□□□ -1
USP28-201ENST00000003302 A6NNC1 897 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms