RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Ndufb6Q3UIU2 128 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Fzd6Q61089 709 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Cd55bQ61476 407 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Cd99l2Q8BIF0 237 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Rab1bQ9D1G1 201 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm36864A0A1Y7VJE6 447 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Cnrip1Q5M8N0 164 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr1281Q7TQY6 305 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Nfam1Q8R4V1 264 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Atg101Q9D8Z6 218 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ctnnbip1Q9JJN6 81 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Igkv5-43A0A0B4J1J2 115 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm44596A0A0N4SVA0 210 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ccdc188F6WEU2 249 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ifna2P01573 190 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gabra1P62812 455 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Cmtm2bQ9DAC0 210 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 BlnkQ9QUN3 457 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Vmn1r170K7N6W9 304 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Nipsnap2O55126 281 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Fpr2O88536 351 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 P2ry1P49650 373 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 ManealQ6P1J0 452 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ccl8Q9Z121 97 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 PdfS4R2K0 231 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm3045A0A1D5RMA1 209 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Klk1b3P00756 261 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Trat1Q3UU67 187 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr591Q7TRR7 314 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Lpar6Q8BMC0 344 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ikzf4Q8C208 586 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Fam98cE9PYD1 344 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 NgpO08692 167 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ndufb11O09111 151 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Hspb7P35385 169 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Cldn18P56857 264 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Shc1P98083 579 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gp49aQ61450 303 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 SrrdQ8K2M3 249 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Hus1bQ8K572 276 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr1392Q8VFA6 311 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr1239Q8VGM8 305 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Abhd12Q99LR1 398 aaKnown RBP10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Cldn15Q9Z0S5 227 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Hmga1P17095 107 aaKnown RBP10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Smap2Q7TN29 428 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Exph5Q0VAV2 1960 aa10.6□□□□□ -0.71
Trim56-201ENSMUST00000054384 Wnt3P17553 355 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Hoxd8P23463 289 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 ClcP97400 68 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Taar5Q5QD14 337 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Trav6-2Q5R1I4 113 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Tmem88Q9D0N8 159 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 NynrinQ5DTZ0 1840 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm6993A0A1W2P738 69 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ankrd65F6YK91 380 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ear3O35290 156 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Cox5bP19536 128 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr15P23275 312 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gabrg3P27681 467 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Tmem108Q8BHE4 574 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Abhd14aQ922Q6 247 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Tmem238lA0A1B0GS74 79 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Slco4c1Q8BGD4 722 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr101Q920Z0 308 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Dock3Q8CIQ7 2027 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm29049A0A087WSM5 227 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 I0C0044D17RikA6PWL3 169 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm21118J3QPK8 227 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 P01806 116 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Ca10P61215 328 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Prrx2Q06348 247 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Tmem217Q14AF1 189 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm20909Q5FWB5 227 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm20852Q5M8R5 227 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm20917Q62457 227 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm20809Q62458 227 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm20865Q62460 227 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Cxxc4Q6NXI8 198 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr1204Q7TR10 309 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm20738Q810R8 227 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Rgs13Q8K443 158 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr1138Q8VFQ9 311 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm20806Q9D9T3 227 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Wwtr1Q9EPK5 395 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Srsf10Q9R0U0 262 aaKnown RBP10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Zfp114B2RRA8 586 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Gm10666K7N6B8 321 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Vmn1r121K7N6J4 314 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Slc16a7O70451 484 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Tbx6P70327 436 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr1336Q8VGH5 314 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Pam16Q9CQV1 125 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Dppa2Q9CWH0 301 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Htra3Q9D236 459 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Olfr1116E9PXB8 307 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 1700012B07RikQ3V0S8 276 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Trav8d-1Q5R1H8 112 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Znf629Q6A085 867 aa10.59□□□□□ -0.71
Trim56-201ENSMUST00000054384 Cdhr3Q8BL00 831 aa10.59□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms