RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Hoxd11P23813 323 aa16.08■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Gsc2P56916 198 aa16.08■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Nhlh1Q02576 133 aa16.08■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Zglp1Q1WG82 266 aa16.08■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Rasl2-9Q61820 216 aa16.08■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 AdoQ6PDY2 256 aa16.08■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Olfr1341Q7TQV4 312 aa16.08■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Srsf7Q8BL97 267 aaKnown RBP16.08■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Hspa12aQ8K0U4 675 aa16.08■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 MrgprdQ91ZB8 321 aa16.08■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 RhebQ921J2 184 aa16.08■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 AspmQ8CJ27 3122 aa16.08■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Ighv1-67A0A0G2JFN9 117 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Trbv29A0A0G2LB96 114 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Olfr64F8VPZ8 307 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Gm6526G3X9Q9 198 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 P01798 113 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Hnf1aP22361 628 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 GrnP28798 589 aaKnown RBP16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Foxa2P35583 459 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Tcl1b1P56840 116 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Tle3Q08122 772 aaKnown RBP16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Defa-rs10Q64263 91 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Stoml3Q6PE84 287 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Acer2Q8VD53 275 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Olfr1257Q8VGP0 309 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 4933400A11RikQ9CR52 288 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Zfhx2Q2MHN3 2562 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Gm12790B1AUV6 201 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 H2-LP01897 362 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Hbb-yP02104 147 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Ccr2P51683 373 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Fgf12P61329 243 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Clpsl2Q3UW21 102 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Degs2Q8R2F2 323 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Olfr980Q8VH08 310 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Rab5aQ9CQD1 215 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Golt1aQ9DCQ3 133 aa16.07■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Tanc2A2A690 1994 aa16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Dgat2l6A2ADU8 337 aa16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Olfr102B2RT33 308 aa16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 BC048679D3YXE9 172 aa16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Gdf1P20863 357 aa16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Defa-rs12P50716 91 aa16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Arf1P84078 181 aa16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Sft2d1Q5SSN7 159 aa16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Q6PIU9 354 aa16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Dcaf12Q8BGZ3 453 aa16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Dctn4Q8CBY8 467 aa16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Tlcd2Q8VC26 310 aa16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Olfr101Q920Z0 308 aa16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 NanpQ9CPT3 248 aa16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Syt7Q9R0N7 403 aa16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Psmb3Q9R1P1 205 aa16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 2410004P03RikA0A087WQY2 205 aa16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Vmn2r60L7N2A1 853 aa16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Vmn1r233Q8R294 319 aa16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Fyttd1Q91Z49 317 aaKnown RBP16.06■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Lrrc37aB1AWG4 3215 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Phlda2O08969 144 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Cox5aP12787 146 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Prdm6Q3UZD5 596 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Mtch1Q791T5 389 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 SargQ8BI29 606 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Ntng2Q8R4F1 589 aaKnown RBP16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Olfr480Q8VEZ0 312 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Olfr508Q8VG42 310 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Loxl4Q924C6 757 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Smim8Q9CQQ0 97 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Olfr632Q9EPN9 317 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Ypel1Q9ESC7 118 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Cited4Q9WUL8 182 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Igkv1-135A0A0B4J1H7 120 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Klri1B2KG20 248 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 P06335 190 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Psg19Q4KL31 475 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Lhfpl4Q5U4E0 247 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Olfr193Q7TS43 309 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Gm5447Q8BPB2 115 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Slc6a8Q8VBW1 640 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Olfr1342Q8VFY3 315 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Smdt1Q9DB10 107 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Hils1Q9QYL0 170 aa16.05■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Rhox7aA2A4F1 281 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Olfr773F6VS78 311 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Olfr1220F7BL62 311 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 IfngP01580 155 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 P01660 111 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Cln6Q3U466 308 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Gm5127Q3UQH6 212 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Klf3Q60980 344 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 FarsaQ8C0C7 508 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Olfr1259Q8VEZ1 309 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Olfr772Q8VGC5 311 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 NgfrQ9Z0W1 417 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Ighv1-34A0A075B5V2 117 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Trav6d-5A0A075B6B9 112 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Gm5890A0A140LI04 305 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Rims4P60191 269 aa16.04■□□□□ 0.16
Shkbp1-201ENSMUST00000003857 Vamp2P63044 116 aa16.04■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 60.4 ms