RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	ASCL3	Q9NQ33	180 aa		11.51	□□□□□ -0.57
PHGDH-233	ENST00000642021	ATP5G3	P48201	142 aa		11.51	□□□□□ -0.57
PHGDH-233	ENST00000642021	TGFBR3	Q03167	851 aa		11.51	□□□□□ -0.57
PHGDH-233	ENST00000642021	COA6	Q5JTJ3	125 aa	Known RBP	11.51	□□□□□ -0.57
PHGDH-233	ENST00000642021		A0A087X0M5	115 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021		A0A1B0GX30	115 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	PGPEP1L	A6NFU8	196 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	CDC34	P49427	236 aa	Predicted RBP	11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	FABP6	P51161	128 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	GNB1	P62873	340 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	DHRS13	Q6UX07	377 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	OR2T10	Q8NGZ9	312 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	ZDHHC11	Q9H8X9	412 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	DVL1	O14640	695 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	TNFSF15	O95150	251 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	IGHV3-13	P01766	116 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	IGHV3-7	P01780	117 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	ZNF883	P0CG24	379 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	CD59	P13987	128 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	EDDM3B	P56851	147 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	VKORC1L1	Q8N0U8	176 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	OR5R1	Q8NH85	324 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	TMEM170A	Q8WVE7	144 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	CIB3	Q96Q77	187 aa	Predicted RBP	11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	GGCT	O75223	188 aa	Known RBP	11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	ZNF664	Q8N3J9	261 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	CD177	Q8N6Q3	437 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	ZNF114	Q8NC26	417 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	ANAPC16	Q96DE5	110 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	FER1L6-AS2	Q96M78	137 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	GUCD1	Q96NT3	240 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	PATZ1	Q9HBE1	687 aa	Known RBP	11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	OR6C3	Q9NZP0	311 aa		11.5	□□□□□ -0.57
PHGDH-233	ENST00000642021	C15orf65	H3BRN8	121 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	IFNL4	K9M1U5	179 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	CD82	P27701	267 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	CD1B	P29016	333 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	EDDM3A	Q14507	147 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	ACTL10	Q5JWF8	245 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	LINC01551	Q86U37	167 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	WDR31	Q8NA23	367 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021		Q8TCH9	128 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	R3HDM4	Q96D70	268 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	TAAR6	Q96RI8	345 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	WDR83OS	Q9Y284	106 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	TSTD3	H0UI37	97 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	FCGR3B	O75015	233 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	NDUFB4	O95168	129 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	PAX1	P15863	534 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	CST9LP1	Q5W188	147 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	INO80C	Q6PI98	192 aa	Predicted RBP	11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	CNEP1R1	Q8N9A8	125 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	PRR7	Q8TB68	274 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	WFIKKN1	Q96NZ8	548 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	TRIB1	Q96RU8	372 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	FAM234A	Q9H0X4	552 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	CXXC4	Q9H2H0	198 aa		11.49	□□□□□ -0.57
PHGDH-233	ENST00000642021	RRH	O14718	337 aa		11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	CIDEA	O60543	219 aa		11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	IGKV3-15	P01624	115 aa		11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	C1QTNF9	P0C862	333 aa		11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	DUT	P33316	252 aa	Known RBP	11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	PDLIM4	P50479	330 aa		11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	ACOT6	Q3I5F7	207 aa	Predicted RBP	11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	FAM78B	Q5VT40	261 aa		11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021		Q6ZT83	130 aa		11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	FAM214B	Q7L5A3	538 aa		11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	DIRC2	Q96SL1	478 aa		11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	HSD17B10	Q99714	261 aa	Known RBP	11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	ATG101	Q9BSB4	218 aa		11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	TMEM204	Q9BSN7	226 aa		11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	CLCF1	Q9UBD9	225 aa		11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	COLQ	Q9Y215	455 aa	Predicted RBP	11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	TRAV3	A0A0B4J244	114 aa		11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	C17orf112	F2Z3M2	114 aa		11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	CDX4	O14627	284 aa	Predicted RBP	11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	TIMM8A	O60220	97 aa	Predicted RBP	11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	VENTX	O95231	258 aa		11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	UTF1	Q5T230	341 aa		11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	VWA1	Q6PCB0	445 aa		11.48	□□□□□ -0.57
PHGDH-233	ENST00000642021	IL3RA	P26951	378 aa		11.47	□□□□□ -0.57
PHGDH-233	ENST00000642021	FAM122A	Q96E09	287 aa		11.47	□□□□□ -0.57
PHGDH-233	ENST00000642021	BOD1L1	Q8NFC6	3051 aa		11.47	□□□□□ -0.57
PHGDH-233	ENST00000642021	TRBV20OR9-2	A0A075B6H5	130 aa		11.47	□□□□□ -0.57
PHGDH-233	ENST00000642021	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	11.47	□□□□□ -0.57
PHGDH-233	ENST00000642021	ZNF705G	A8MUZ8	300 aa	Predicted RBP	11.47	□□□□□ -0.57
PHGDH-233	ENST00000642021	RBFOX2	O43251	390 aa	Known RBP eCLIP	11.47	□□□□□ -0.57	7e-8	■■□□□ 12.4
PHGDH-233	ENST00000642021	TYMS	P04818	313 aa		11.47	□□□□□ -0.57
PHGDH-233	ENST00000642021	ZNF134	P52741	427 aa		11.47	□□□□□ -0.57
PHGDH-233	ENST00000642021	TREML4	Q6UXN2	200 aa		11.47	□□□□□ -0.57
PHGDH-233	ENST00000642021	TCTEX1D1	Q8N7M0	179 aa		11.47	□□□□□ -0.57
PHGDH-233	ENST00000642021	SDSL	Q96GA7	329 aa		11.47	□□□□□ -0.57
PHGDH-233	ENST00000642021		A0A1B0GUS0	222 aa		11.46	□□□□□ -0.57
PHGDH-233	ENST00000642021	IFNA10	P01566	189 aa		11.46	□□□□□ -0.57
PHGDH-233	ENST00000642021	CECR9	P0C854	216 aa		11.46	□□□□□ -0.57
PHGDH-233	ENST00000642021	SRP14	P37108	136 aa	Known RBP	11.46	□□□□□ -0.57
PHGDH-233	ENST00000642021	KIR2DL2	P43627	348 aa	Predicted RBP	11.46	□□□□□ -0.57
PHGDH-233	ENST00000642021	SOX8	P57073	446 aa		11.46	□□□□□ -0.57
PHGDH-233	ENST00000642021	TMEM95	Q3KNT9	176 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms