RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 C14orf144Q96I85 54 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 TRAV3A0A0B4J244 114 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 FAM90A26D6RGX4 464 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 CLDN14O95500 239 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 NPPCP23582 126 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 DDTP30046 118 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 GNB2P62879 340 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 GABRA6Q16445 453 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 MIC13Q5XKP0 118 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 DEFB108BQ8NET1 73 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 IER2Q9BTL4 223 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 TMEM265A0A087WTH1 108 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 IQCF6A8MYZ5 107 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 C17orf112F2Z3M2 114 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 SELLP14151 372 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 C11orf53Q8IXP5 236 aa12.17□□□□□ -0.46
SCARB2-221ENST00000640341 TNCP24821 2201 aa12.16□□□□□ -0.46
SCARB2-221ENST00000640341 RRHO14718 337 aa12.16□□□□□ -0.46
SCARB2-221ENST00000640341 MBP02144 154 aa12.16□□□□□ -0.46
SCARB2-221ENST00000640341 CECR9P0C854 216 aa12.16□□□□□ -0.46
SCARB2-221ENST00000640341 CD59P13987 128 aa12.16□□□□□ -0.46
SCARB2-221ENST00000640341 ACOT6Q3I5F7 207 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-221ENST00000640341 TMEM183AQ8IXX5 376 aa12.16□□□□□ -0.46
SCARB2-221ENST00000640341 PIEZO2Q9H5I5 2752 aa12.16□□□□□ -0.46
SCARB2-221ENST00000640341 HRASP01112 189 aa12.16□□□□□ -0.46
SCARB2-221ENST00000640341 SMIM21Q3B7S5 101 aa12.16□□□□□ -0.46
SCARB2-221ENST00000640341 UTF1Q5T230 341 aa12.16□□□□□ -0.46
SCARB2-221ENST00000640341 TCF23Q7RTU1 214 aa12.16□□□□□ -0.46
SCARB2-221ENST00000640341 ACTL6BO94805 426 aa12.15□□□□□ -0.46
SCARB2-221ENST00000640341 CD177Q8N6Q3 437 aa12.15□□□□□ -0.46
SCARB2-221ENST00000640341 ZNF114Q8NC26 417 aa12.15□□□□□ -0.46
SCARB2-221ENST00000640341 CIB3Q96Q77 187 aaPredicted RBP12.15□□□□□ -0.46
SCARB2-221ENST00000640341 OPN3Q9H1Y3 402 aaPredicted RBP12.15□□□□□ -0.46
SCARB2-221ENST00000640341 CXXC4Q9H2H0 198 aa12.15□□□□□ -0.46
SCARB2-221ENST00000640341 PMS2P5A8MQ11 134 aa12.15□□□□□ -0.46
SCARB2-221ENST00000640341 CD33P20138 364 aa12.15□□□□□ -0.46
SCARB2-221ENST00000640341 PRDX2P32119 198 aa12.15□□□□□ -0.46
SCARB2-221ENST00000640341 SLC35E4Q6ICL7 350 aa12.15□□□□□ -0.46
SCARB2-221ENST00000640341 FDCSPQ8NFU4 85 aa12.15□□□□□ -0.46
SCARB2-221ENST00000640341 TAAR6Q96RI8 345 aa12.15□□□□□ -0.46
SCARB2-221ENST00000640341 C15orf62A8K5M9 175 aa12.15□□□□□ -0.46
SCARB2-221ENST00000640341 TMEM250H0YL14 139 aa12.15□□□□□ -0.46
SCARB2-221ENST00000640341 AQP7O14520 342 aa12.15□□□□□ -0.46
SCARB2-221ENST00000640341 ARL14EPLP0DKL9 152 aa12.15□□□□□ -0.46
SCARB2-221ENST00000640341 MYOD1P15172 320 aa12.15□□□□□ -0.46
SCARB2-221ENST00000640341 ATP6V1FQ16864 119 aa12.15□□□□□ -0.46
SCARB2-221ENST00000640341 C9orf106Q8NAJ2 232 aa12.15□□□□□ -0.46
SCARB2-221ENST00000640341 PRO3102Q9H379 93 aa12.15□□□□□ -0.46
SCARB2-221ENST00000640341 MANBALQ9NQG1 85 aa12.15□□□□□ -0.46
SCARB2-221ENST00000640341 ATMQ13315 3056 aa12.14□□□□□ -0.47
SCARB2-221ENST00000640341 CDX4O14627 284 aaPredicted RBP12.14□□□□□ -0.47
SCARB2-221ENST00000640341 SPRY3O43610 288 aa12.14□□□□□ -0.47
SCARB2-221ENST00000640341 SNRPCP09234 159 aaKnown RBP12.14□□□□□ -0.47
SCARB2-221ENST00000640341 GNB1P62873 340 aa12.14□□□□□ -0.47
SCARB2-221ENST00000640341 OR6C3Q9NZP0 311 aa12.14□□□□□ -0.47
SCARB2-221ENST00000640341 RAB29O14966 203 aa12.14□□□□□ -0.47
SCARB2-221ENST00000640341 GATCO43716 136 aaKnown RBP12.14□□□□□ -0.47
SCARB2-221ENST00000640341 SPINK4O60575 86 aa12.14□□□□□ -0.47
SCARB2-221ENST00000640341 GZMBP10144 247 aa12.14□□□□□ -0.47
SCARB2-221ENST00000640341 ZNF83P51522 516 aa12.14□□□□□ -0.47
SCARB2-221ENST00000640341 ERVK-16P61578 105 aa12.14□□□□□ -0.47
SCARB2-221ENST00000640341 ZNF718Q3SXZ3 478 aa12.14□□□□□ -0.47
SCARB2-221ENST00000640341 Q6ZT83 130 aa12.14□□□□□ -0.47
SCARB2-221ENST00000640341 FAM122AQ96E09 287 aa12.14□□□□□ -0.47
SCARB2-221ENST00000640341 ABCA1O95477 2261 aa12.14□□□□□ -0.47
SCARB2-221ENST00000640341 GRIFINA4D1Z8 144 aa12.14□□□□□ -0.47
SCARB2-221ENST00000640341 SCGB1D1O95968 90 aa12.14□□□□□ -0.47
SCARB2-221ENST00000640341 NUBP1P53384 320 aa12.14□□□□□ -0.47
SCARB2-221ENST00000640341 HIPK2Q9H2X6 1198 aa12.14□□□□□ -0.47
SCARB2-221ENST00000640341 TIMM9Q9Y5J7 89 aa12.14□□□□□ -0.47
SCARB2-221ENST00000640341 TMEM210A6NLX4 147 aa12.13□□□□□ -0.47
SCARB2-221ENST00000640341 CD82P27701 267 aa12.13□□□□□ -0.47
SCARB2-221ENST00000640341 TNFSF10P50591 281 aa12.13□□□□□ -0.47
SCARB2-221ENST00000640341 PKIAP61925 76 aa12.13□□□□□ -0.47
SCARB2-221ENST00000640341 SPRNQ5BIV9 151 aa12.13□□□□□ -0.47
SCARB2-221ENST00000640341 INO80CQ6PI98 192 aaPredicted RBP12.13□□□□□ -0.47
SCARB2-221ENST00000640341 KCNIP4Q6PIL6 250 aa12.13□□□□□ -0.47
SCARB2-221ENST00000640341 ZBTB34Q8NCN2 500 aa12.13□□□□□ -0.47
SCARB2-221ENST00000640341 SGMS2Q8NHU3 365 aa12.13□□□□□ -0.47
SCARB2-221ENST00000640341 TRAPPC1Q9Y5R8 145 aa12.13□□□□□ -0.47
SCARB2-221ENST00000640341 PROP1O75360 226 aa12.13□□□□□ -0.47
SCARB2-221ENST00000640341 GNG10P50151 68 aa12.13□□□□□ -0.47
SCARB2-221ENST00000640341 HSD17B10Q99714 261 aaKnown RBP12.13□□□□□ -0.47
SCARB2-221ENST00000640341 MS4A5Q9H3V2 200 aa12.13□□□□□ -0.47
SCARB2-221ENST00000640341 SCO2A0A1W2PP80 73 aa12.12□□□□□ -0.47
SCARB2-221ENST00000640341 TNRC6BQ9UPQ9 1833 aaKnown RBP12.12□□□□□ -0.47
SCARB2-221ENST00000640341 TGOLN2O43493 480 aa12.12□□□□□ -0.47
SCARB2-221ENST00000640341 IL3RAP26951 378 aa12.12□□□□□ -0.47
SCARB2-221ENST00000640341 KIR2DL2P43627 348 aaPredicted RBP12.12□□□□□ -0.47
SCARB2-221ENST00000640341 MOGAT3Q86VF5 341 aa12.12□□□□□ -0.47
SCARB2-221ENST00000640341 S1PR3Q99500 378 aa12.12□□□□□ -0.47
SCARB2-221ENST00000640341 AGMATQ9BSE5 352 aa12.12□□□□□ -0.47
SCARB2-221ENST00000640341 PXMP4Q9Y6I8 212 aa12.12□□□□□ -0.47
SCARB2-221ENST00000640341 HCFC1P51610 2035 aa12.12□□□□□ -0.47
SCARB2-221ENST00000640341 SLC31A2O15432 143 aa12.12□□□□□ -0.47
SCARB2-221ENST00000640341 DUTP33316 252 aaKnown RBP12.12□□□□□ -0.47
SCARB2-221ENST00000640341 ZNF134P52741 427 aa12.12□□□□□ -0.47
SCARB2-221ENST00000640341 LINC01551Q86U37 167 aa12.12□□□□□ -0.47
SCARB2-221ENST00000640341 IMMP2LQ96T52 175 aa12.12□□□□□ -0.47
SCARB2-221ENST00000640341 SPATA31B1PQ5VZV4 182 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms