RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 TRAV3A0A0B4J244 114 aa13.77□□□□□ -0.21
HNRNPU-228ENST00000640306 CD82P27701 267 aa13.77□□□□□ -0.21
HNRNPU-228ENST00000640306 CD1BP29016 333 aa13.77□□□□□ -0.21
HNRNPU-228ENST00000640306 RPL39P5Q59GN2 51 aa13.77□□□□□ -0.21
HNRNPU-228ENST00000640306 PRAMEF5Q5TYX0 476 aa13.77□□□□□ -0.21
HNRNPU-228ENST00000640306 SLC35E4Q6ICL7 350 aa13.77□□□□□ -0.21
HNRNPU-228ENST00000640306 SSMEM1Q8WWF3 244 aa13.77□□□□□ -0.21
HNRNPU-228ENST00000640306 RRHO14718 337 aa13.77□□□□□ -0.21
HNRNPU-228ENST00000640306 RAB29O14966 203 aa13.77□□□□□ -0.21
HNRNPU-228ENST00000640306 IL3RAP26951 378 aa13.77□□□□□ -0.21
HNRNPU-228ENST00000640306 ACOT6Q3I5F7 207 aaPredicted RBP13.77□□□□□ -0.21
HNRNPU-228ENST00000640306 VWA1Q6PCB0 445 aa13.77□□□□□ -0.21
HNRNPU-228ENST00000640306 LINC01551Q86U37 167 aa13.77□□□□□ -0.21
HNRNPU-228ENST00000640306 LRP11Q86VZ4 500 aa13.77□□□□□ -0.21
HNRNPU-228ENST00000640306 ABHD12Q8N2K0 398 aa13.77□□□□□ -0.21
HNRNPU-228ENST00000640306 MISP3Q96FF7 219 aa13.77□□□□□ -0.21
HNRNPU-228ENST00000640306 HEYLQ9NQ87 328 aaPredicted RBP13.77□□□□□ -0.21
HNRNPU-228ENST00000640306 COL27A1Q8IZC6 1860 aaPredicted RBP13.77□□□□□ -0.21
HNRNPU-228ENST00000640306 ZNF318Q5VUA4 2279 aa13.76□□□□□ -0.21
HNRNPU-228ENST00000640306 C21orf140B9A014 251 aa13.76□□□□□ -0.21
HNRNPU-228ENST00000640306 PROP1O75360 226 aa13.76□□□□□ -0.21
HNRNPU-228ENST00000640306 THBS3P49746 956 aa13.76□□□□□ -0.21
HNRNPU-228ENST00000640306 UTF1Q5T230 341 aa13.76□□□□□ -0.21
HNRNPU-228ENST00000640306 MIC13Q5XKP0 118 aa13.76□□□□□ -0.21
HNRNPU-228ENST00000640306 Q8N7P7 452 aa13.76□□□□□ -0.21
HNRNPU-228ENST00000640306 ZBTB34Q8NCN2 500 aa13.76□□□□□ -0.21
HNRNPU-228ENST00000640306 TMEM170AQ8WVE7 144 aa13.76□□□□□ -0.21
HNRNPU-228ENST00000640306 HES4Q9HCC6 221 aa13.76□□□□□ -0.21
HNRNPU-228ENST00000640306 OR6C3Q9NZP0 311 aa13.76□□□□□ -0.21
HNRNPU-228ENST00000640306 IGHV3OR15-7A0A075B7D8 119 aa13.76□□□□□ -0.21
HNRNPU-228ENST00000640306 C17orf112F2Z3M2 114 aa13.76□□□□□ -0.21
HNRNPU-228ENST00000640306 GPR12P47775 334 aa13.76□□□□□ -0.21
HNRNPU-228ENST00000640306 GABRA6Q16445 453 aa13.76□□□□□ -0.21
HNRNPU-228ENST00000640306 CIB3Q96Q77 187 aaPredicted RBP13.76□□□□□ -0.21
HNRNPU-228ENST00000640306 M0R1X1 148 aa13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 DVL1O14640 695 aa13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 OR4A8P0C604 315 aa13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 CD33P20138 364 aa13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 SOX8P57073 446 aa13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 TGIF2LYQ8IUE0 185 aa13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 CD177Q8N6Q3 437 aa13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 TAAR6Q96RI8 345 aa13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 PCNX2A6NKB5 2137 aa13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 CEP250Q9BV73 2442 aa13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 RBFOX2O43251 390 aaKnown RBP eCLIP13.75□□□□□ -0.212e-10■■■■■ 37.2
HNRNPU-228ENST00000640306 ARL14EPLP0DKL9 152 aa13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 HOXC12P31275 282 aa13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 SRSF6Q13247 344 aaKnown RBP13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 ACTL10Q5JWF8 245 aa13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 TMEM256Q8N2U0 113 aa13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 OR5R1Q8NH85 324 aa13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 LRRC29Q8WV35 223 aa13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 ANAPC16Q96DE5 110 aa13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 GMPPAQ96IJ6 420 aaPredicted RBP13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 PARD6AQ9NPB6 346 aa13.75□□□□□ -0.21
HNRNPU-228ENST00000640306 RIF1Q5UIP0 2472 aaKnown RBP13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 AQP7O14520 342 aa13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 Q8TCH9 128 aa13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 INTS1Q8N201 2190 aaKnown RBP13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 CNOT1A5YKK6 2376 aaKnown RBP13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 TRBV20OR9-2A0A075B6H5 130 aa13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 TMEM210A6NLX4 147 aa13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 OR4A16Q8NH70 328 aa13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 MRPL37Q9BZE1 423 aaKnown RBP13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 DUSP13Q9UII6 198 aa13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 ZFHX2Q9C0A1 2572 aaPredicted RBP13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 SCO2A0A1W2PP80 73 aa13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 SPINT2O43291 252 aa13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 NUPR1O60356 82 aa13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 GGCTO75223 188 aaKnown RBP13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 PDLIM3Q53GG5 364 aaPredicted RBP13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 KCNIP4Q6PIL6 250 aa13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 SGMS2Q8NHU3 365 aa13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 FER1L6-AS2Q96M78 137 aa13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 CXXC4Q9H2H0 198 aa13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 MS4A5Q9H3V2 200 aa13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 TRAPPC1Q9Y5R8 145 aa13.74□□□□□ -0.21
HNRNPU-228ENST00000640306 GRIFINA4D1Z8 144 aa13.73□□□□□ -0.21
HNRNPU-228ENST00000640306 OR2Z1Q8NG97 314 aa13.73□□□□□ -0.21
HNRNPU-228ENST00000640306 WDR83OSQ9Y284 106 aa13.73□□□□□ -0.21
HNRNPU-228ENST00000640306 CECR9P0C854 216 aa13.73□□□□□ -0.21
HNRNPU-228ENST00000640306 DUTP33316 252 aaKnown RBP13.73□□□□□ -0.21
HNRNPU-228ENST00000640306 CNN1P51911 297 aaKnown RBP13.73□□□□□ -0.21
HNRNPU-228ENST00000640306 SSX2Q16385 188 aa13.73□□□□□ -0.21
HNRNPU-228ENST00000640306 FAM214BQ7L5A3 538 aa13.73□□□□□ -0.21
HNRNPU-228ENST00000640306 ZNRF1Q8ND25 227 aa13.73□□□□□ -0.21
HNRNPU-228ENST00000640306 HINT2Q9BX68 163 aa13.73□□□□□ -0.21
HNRNPU-228ENST00000640306 ROS1P08922 2347 aa13.73□□□□□ -0.21
HNRNPU-228ENST00000640306 A8MWP6 167 aa13.72□□□□□ -0.21
HNRNPU-228ENST00000640306 SCGB1D1O95968 90 aa13.72□□□□□ -0.21
HNRNPU-228ENST00000640306 HES3Q5TGS1 186 aa13.72□□□□□ -0.21
HNRNPU-228ENST00000640306 TREML4Q6UXN2 200 aa13.72□□□□□ -0.21
HNRNPU-228ENST00000640306 HSD17B10Q99714 261 aaKnown RBP13.72□□□□□ -0.21
HNRNPU-228ENST00000640306 CACNA1GO43497 2377 aa13.72□□□□□ -0.21
HNRNPU-228ENST00000640306 SELLP14151 372 aa13.72□□□□□ -0.21
HNRNPU-228ENST00000640306 MYOD1P15172 320 aa13.72□□□□□ -0.21
HNRNPU-228ENST00000640306 GCH1P30793 250 aa13.72□□□□□ -0.21
HNRNPU-228ENST00000640306 CCL11P51671 97 aa13.72□□□□□ -0.21
HNRNPU-228ENST00000640306 VWC2Q2TAL6 325 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms