RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 TEX36Q5VZQ5 186 aa0.09□□□□□ -2.4
CCDC7-211ENST00000638889 DYNC2LI1Q8TCX1 351 aa0.09□□□□□ -2.4
CCDC7-211ENST00000638889 NUP160Q12769 1436 aa0.09□□□□□ -2.4
CCDC7-211ENST00000638889 LAMA4Q16363 1823 aa0.08□□□□□ -2.4
CCDC7-211ENST00000638889 TONSLQ96HA7 1378 aa0.08□□□□□ -2.4
CCDC7-211ENST00000638889 MACF1Q9UPN3 7388 aaKnown RBP0.08□□□□□ -2.4
CCDC7-211ENST00000638889 EIF4G1Q04637 1599 aaKnown RBP0.08□□□□□ -2.4
CCDC7-211ENST00000638889 C9JCJ5 164 aa0.08□□□□□ -2.4
CCDC7-211ENST00000638889 TRAPPC2LH3BP13 241 aa0.08□□□□□ -2.4
CCDC7-211ENST00000638889 GOLGA8RI6L899 631 aa0.08□□□□□ -2.4
CCDC7-211ENST00000638889 MT-CO2P00403 227 aa0.08□□□□□ -2.4
CCDC7-211ENST00000638889 ATP5G1P05496 136 aa0.08□□□□□ -2.4
CCDC7-211ENST00000638889 GP1BAP07359 652 aa0.08□□□□□ -2.4
CCDC7-211ENST00000638889 C9orf64Q5T6V5 341 aa0.08□□□□□ -2.4
CCDC7-211ENST00000638889 GPHB5Q86YW7 130 aa0.08□□□□□ -2.4
CCDC7-211ENST00000638889 SLC22A24Q8N4F4 322 aa0.08□□□□□ -2.4
CCDC7-211ENST00000638889 RPP25LQ8N5L8 163 aaKnown RBP0.08□□□□□ -2.4
CCDC7-211ENST00000638889 RNASEH2CQ8TDP1 164 aaKnown RBP0.08□□□□□ -2.4
CCDC7-211ENST00000638889 C12orf43Q96C57 262 aaKnown RBP0.08□□□□□ -2.4
CCDC7-211ENST00000638889 CCDC124Q96CT7 223 aaKnown RBP0.08□□□□□ -2.4
CCDC7-211ENST00000638889 LHFPL6Q9Y693 200 aa0.08□□□□□ -2.4
CCDC7-211ENST00000638889 DICER1Q9UPY3 1922 aaKnown RBP0.08□□□□□ -2.4
CCDC7-211ENST00000638889 SIPA1L1O43166 1804 aa0.08□□□□□ -2.4
CCDC7-211ENST00000638889 FAM208BQ5VWN6 2430 aa0.07□□□□□ -2.4
CCDC7-211ENST00000638889 APCP25054 2843 aa0.07□□□□□ -2.4
CCDC7-211ENST00000638889 LCN1P31025 176 aa0.07□□□□□ -2.4
CCDC7-211ENST00000638889 NUP62P37198 522 aaPredicted RBP0.07□□□□□ -2.4
CCDC7-211ENST00000638889 GNA13Q14344 377 aa0.07□□□□□ -2.4
CCDC7-211ENST00000638889 RBM48Q5RL73 367 aaKnown RBP0.07□□□□□ -2.4
CCDC7-211ENST00000638889 FAM27BQ5VT28 67 aa0.07□□□□□ -2.4
CCDC7-211ENST00000638889 C12orf29Q8N999 325 aa0.07□□□□□ -2.4
CCDC7-211ENST00000638889 OR52E4Q8NGH9 312 aa0.07□□□□□ -2.4
CCDC7-211ENST00000638889 LRRC45Q96CN5 670 aa0.07□□□□□ -2.4
CCDC7-211ENST00000638889 MSANTD3Q96H12 275 aa0.07□□□□□ -2.4
CCDC7-211ENST00000638889 TRABDQ9H4I3 376 aa0.07□□□□□ -2.4
CCDC7-211ENST00000638889 ASCL3Q9NQ33 180 aa0.07□□□□□ -2.4
CCDC7-211ENST00000638889 PARVAQ9NVD7 372 aa0.07□□□□□ -2.4
CCDC7-211ENST00000638889 NAT8Q9UHE5 227 aa0.07□□□□□ -2.4
CCDC7-211ENST00000638889 HDGFL3Q9Y3E1 203 aa0.07□□□□□ -2.4
CCDC7-211ENST00000638889 PCYT1BQ9Y5K3 369 aaPredicted RBP0.07□□□□□ -2.4
CCDC7-211ENST00000638889 TMEM94Q12767 1356 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 NSD1Q96L73 2696 aaPredicted RBP0.06□□□□□ -2.4
CCDC7-211ENST00000638889 CACNA1EQ15878 2313 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 GOLGA8QA0A0J9YX86 632 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 NDUFS8O00217 210 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 ATP8B1O43520 1251 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 HLA-DQB2P05538 268 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 CCDC172P0C7W6 258 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 CCL5P13501 91 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 KCNJ3P48549 501 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 FABP5Q01469 135 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 AKR1C1Q04828 323 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 CLEC12BQ2HXU8 276 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 SPATA8Q6RVD6 105 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 SBSPONQ8IVN8 264 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 OR8B3Q8NGG8 313 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 TESCQ96BS2 214 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 OBSCN-AS1Q96MR7 158 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 SSPOA2VEC9 5147 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 HYDINQ4G0P3 5121 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 TPRP12270 2363 aaKnown RBP0.06□□□□□ -2.4
CCDC7-211ENST00000638889 KIF24Q5T7B8 1368 aa0.06□□□□□ -2.4
CCDC7-211ENST00000638889 APC2O95996 2303 aa0.05□□□□□ -2.4
CCDC7-211ENST00000638889 ZFC3H1O60293 1989 aaKnown RBP0.05□□□□□ -2.4
CCDC7-211ENST00000638889 GOLGA6L10A6NI86 522 aa0.05□□□□□ -2.4
CCDC7-211ENST00000638889 TMEM212A6NML5 194 aa0.05□□□□□ -2.4
CCDC7-211ENST00000638889 BRI3O95415 125 aa0.05□□□□□ -2.4
CCDC7-211ENST00000638889 TFPTP0C1Z6 253 aa0.05□□□□□ -2.4
CCDC7-211ENST00000638889 LINC00614P0C842 121 aa0.05□□□□□ -2.4
CCDC7-211ENST00000638889 UBBP0CG47 229 aa0.05□□□□□ -2.4
CCDC7-211ENST00000638889 PVALBP20472 110 aaPredicted RBP0.05□□□□□ -2.4
CCDC7-211ENST00000638889 F8A1P23610 371 aa0.05□□□□□ -2.4
CCDC7-211ENST00000638889 HPCAP84074 193 aa0.05□□□□□ -2.4
CCDC7-211ENST00000638889 SMAGPQ0VAQ4 97 aa0.05□□□□□ -2.4
CCDC7-211ENST00000638889 CDK10Q15131 360 aa0.05□□□□□ -2.4
CCDC7-211ENST00000638889 SPATA24Q86W54 205 aa0.05□□□□□ -2.4
CCDC7-211ENST00000638889 STOML3Q8TAV4 291 aa0.05□□□□□ -2.4
CCDC7-211ENST00000638889 RAB2BQ8WUD1 216 aa0.05□□□□□ -2.4
CCDC7-211ENST00000638889 MROQ9BYG7 248 aa0.05□□□□□ -2.4
CCDC7-211ENST00000638889 ZNHIT6Q9NWK9 470 aaKnown RBP0.05□□□□□ -2.4
CCDC7-211ENST00000638889 STAB1Q9NY15 2570 aa0.05□□□□□ -2.4
CCDC7-211ENST00000638889 PTPRZ1P23471 2315 aaPredicted RBP0.05□□□□□ -2.4
CCDC7-211ENST00000638889 MAP3K19Q56UN5 1328 aa0.05□□□□□ -2.4
CCDC7-211ENST00000638889 PTPRSQ13332 1948 aa0.05□□□□□ -2.4
CCDC7-211ENST00000638889 FAT1Q14517 4588 aa0.04□□□□□ -2.4
CCDC7-211ENST00000638889 TTC28Q96AY4 2481 aa0.04□□□□□ -2.4
CCDC7-211ENST00000638889 SYNE1Q8NF91 8797 aaKnown RBP0.04□□□□□ -2.4
CCDC7-211ENST00000638889 TRBV6-7A0A0A0MS04 114 aa0.04□□□□□ -2.4
CCDC7-211ENST00000638889 DAPL1A0PJW8 107 aa0.04□□□□□ -2.4
CCDC7-211ENST00000638889 METTL15A6NJ78 407 aa0.04□□□□□ -2.4
CCDC7-211ENST00000638889 C19orf84I3L1E1 186 aa0.04□□□□□ -2.4
CCDC7-211ENST00000638889 SDCBPO00560 298 aaPredicted RBP0.04□□□□□ -2.4
CCDC7-211ENST00000638889 ITGB1BP1O14713 200 aa0.04□□□□□ -2.4
CCDC7-211ENST00000638889 PRH1P02810 166 aa0.04□□□□□ -2.4
CCDC7-211ENST00000638889 MSNP26038 577 aaKnown RBP0.04□□□□□ -2.4
CCDC7-211ENST00000638889 MIPP30301 263 aa0.04□□□□□ -2.4
CCDC7-211ENST00000638889 RASSF6Q6ZTQ3 369 aa0.04□□□□□ -2.4
CCDC7-211ENST00000638889 DHFR2Q86XF0 187 aa0.04□□□□□ -2.4
CCDC7-211ENST00000638889 BLIDQ8IZY5 108 aa0.04□□□□□ -2.4
CCDC7-211ENST00000638889 C17orf78Q8N4C9 275 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms