RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 DCTN5Q9BTE1 182 aa9.09□□□□□ -0.95
SNIP1-204ENST00000638725 IQCF6A8MYZ5 107 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 RRHO14718 337 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 CASP6P55212 293 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 MIC13Q5XKP0 118 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 TBX15Q96SF7 602 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 IMMP2LQ96T52 175 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 DEFB127Q9H1M4 99 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 M0R143 59 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 SOX15O60248 233 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 KITLGP21583 273 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 OR10J1P30954 320 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 FOXF2Q12947 444 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 TRIP6Q15654 476 aaKnown RBP9.08□□□□□ -0.96
SNIP1-204ENST00000638725 PRAMEF6Q5VXH4 476 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 TREML4Q6UXN2 200 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 C11orf53Q8IXP5 236 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 OCC1Q8TAD7 63 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 CMTM2Q8TAZ6 248 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 IER2Q9BTL4 223 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 ZDHHC11Q9H8X9 412 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 ABI3Q9P2A4 366 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 TP53TG3Q9ULZ0 132 aa9.08□□□□□ -0.96
SNIP1-204ENST00000638725 TMEM210A6NLX4 147 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 C9orf172C9J069 976 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 FCGR3BO75015 233 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 MRPL49Q13405 166 aaKnown RBP9.07□□□□□ -0.96
SNIP1-204ENST00000638725 GABRA6Q16445 453 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 TMEM249Q2WGJ8 235 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 BTF3L4Q96K17 158 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 HSD17B10Q99714 261 aaKnown RBP9.07□□□□□ -0.96
SNIP1-204ENST00000638725 MGST2Q99735 147 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 FAM234AQ9H0X4 552 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 MS4A5Q9H3V2 200 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 FOXJ2Q9P0K8 574 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 COL27A1Q8IZC6 1860 aaPredicted RBP9.07□□□□□ -0.96
SNIP1-204ENST00000638725 MED13Q9UHV7 2174 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 J3QW42 95 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 AQP7O14520 342 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 PROP1O75360 226 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 LYZL6O75951 148 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 STAG3L2P0CL84 134 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 STAG3L3P0CL85 134 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 CBLN1P23435 193 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 TIMP3P35625 211 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 RPL29P47914 159 aaKnown RBP9.07□□□□□ -0.96
SNIP1-204ENST00000638725 TDGF1P3P51864 188 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 PDLIM3Q53GG5 364 aaPredicted RBP9.07□□□□□ -0.96
SNIP1-204ENST00000638725 DCAF10Q5QP82 559 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 PRAMEF5Q5TYX0 476 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 ACP7Q6ZNF0 438 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 VKORC1L1Q8N0U8 176 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 TCTEX1D1Q8N7M0 179 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 KLF14Q8TD94 323 aaPredicted RBP9.07□□□□□ -0.96
SNIP1-204ENST00000638725 ZCCHC14Q8WYQ9 949 aaKnown RBP9.07□□□□□ -0.96
SNIP1-204ENST00000638725 GGTLC1Q9BX51 225 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 SLC17A3O00476 420 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 WISP2O76076 250 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 OPRK1P41145 380 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 LINC00310P59036 64 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 UBE2NP61088 152 aaKnown RBP9.07□□□□□ -0.96
SNIP1-204ENST00000638725 YPEL3P61236 119 aaPredicted RBP9.07□□□□□ -0.96
SNIP1-204ENST00000638725 TOMM20LQ6UXN7 152 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 Q6ZWC4 215 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 OR10G8Q8NGN5 311 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 Q8TCH9 128 aa9.07□□□□□ -0.96
SNIP1-204ENST00000638725 YTHDF2Q9Y5A9 579 aaKnown RBP9.07□□□□□ -0.96
SNIP1-204ENST00000638725 PTPRBP23467 1997 aa9.06□□□□□ -0.96
SNIP1-204ENST00000638725 SP1P08047 785 aa9.06□□□□□ -0.96
SNIP1-204ENST00000638725 RAB4AP20338 218 aa9.06□□□□□ -0.96
SNIP1-204ENST00000638725 IGHV1-2P23083 117 aa9.06□□□□□ -0.96
SNIP1-204ENST00000638725 EDDM3AQ14507 147 aa9.06□□□□□ -0.96
SNIP1-204ENST00000638725 LPAL2Q16609 132 aa9.06□□□□□ -0.96
SNIP1-204ENST00000638725 HLA-DRB5Q30154 266 aa9.06□□□□□ -0.96
SNIP1-204ENST00000638725 PEAR1Q5VY43 1037 aaPredicted RBP9.06□□□□□ -0.96
SNIP1-204ENST00000638725 ZNF705AQ6ZN79 300 aaPredicted RBP9.06□□□□□ -0.96
SNIP1-204ENST00000638725 SSMEM1Q8WWF3 244 aa9.06□□□□□ -0.96
SNIP1-204ENST00000638725 SPRY4Q9C004 299 aa9.06□□□□□ -0.96
SNIP1-204ENST00000638725 HEYLQ9NQ87 328 aaPredicted RBP9.06□□□□□ -0.96
SNIP1-204ENST00000638725 URB1O60287 2271 aaKnown RBP9.06□□□□□ -0.96
SNIP1-204ENST00000638725 HPRT1P00492 218 aa9.06□□□□□ -0.96
SNIP1-204ENST00000638725 TDGF1P13385 188 aa9.06□□□□□ -0.96
SNIP1-204ENST00000638725 DUTP33316 252 aaKnown RBP9.06□□□□□ -0.96
SNIP1-204ENST00000638725 ZNF90Q03938 601 aa9.06□□□□□ -0.96
SNIP1-204ENST00000638725 TDRG1Q3Y452 100 aa9.06□□□□□ -0.96
SNIP1-204ENST00000638725 SPATA31B1PQ5VZV4 182 aa9.06□□□□□ -0.96
SNIP1-204ENST00000638725 WDR82Q6UXN9 313 aa9.06□□□□□ -0.96
SNIP1-204ENST00000638725 ABHD12Q8N2K0 398 aa9.06□□□□□ -0.96
SNIP1-204ENST00000638725 TMEM106BQ9NUM4 274 aa9.06□□□□□ -0.96
SNIP1-204ENST00000638725 SPRR3Q9UBC9 169 aa9.06□□□□□ -0.96
SNIP1-204ENST00000638725 FZR1Q9UM11 496 aa9.06□□□□□ -0.96
SNIP1-204ENST00000638725 HCFC1P51610 2035 aa9.05□□□□□ -0.96
SNIP1-204ENST00000638725 TRAV3A0A0B4J244 114 aa9.05□□□□□ -0.96
SNIP1-204ENST00000638725 PRSS46E5RG02 174 aa9.05□□□□□ -0.96
SNIP1-204ENST00000638725 K7EN84 100 aa9.05□□□□□ -0.96
SNIP1-204ENST00000638725 MPDU1O75352 247 aa9.05□□□□□ -0.96
SNIP1-204ENST00000638725 SERF1AO75920 110 aa9.05□□□□□ -0.96
SNIP1-204ENST00000638725 CXorf1O96002 111 aa9.05□□□□□ -0.96
SNIP1-204ENST00000638725 IGHV3-13P01766 116 aa9.05□□□□□ -0.96
SNIP1-204ENST00000638725 IGHV3-7P01780 117 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms