RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 ZBTB34Q8NCN2 500 aa17■□□□□ 0.31
SCN1B-206ENST00000638536 FCAMRQ8WWV6 532 aa17■□□□□ 0.31
SCN1B-206ENST00000638536 GABARAPH6UMI1 98 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 ELANEP08246 267 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 TSPAN5P62079 268 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 AADACL3Q5VUY0 350 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 ETV3LQ6ZN32 361 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 TEX45Q8NA69 505 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 OR51H1Q8NH63 302 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 GRPEL2Q8TAA5 225 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 ARPC1AQ92747 370 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 DUX3Q96PT4 197 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 SOSTQ9BQB4 213 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 ZFP57Q9NU63 452 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 A0A1W2PN81 502 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 PF4V1P10720 104 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 CHRNA7P36544 502 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 CXorf66Q5JRM2 361 aaPredicted RBP16.99■□□□□ 0.31
SCN1B-206ENST00000638536 VAX1Q5SQQ9 334 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 PYHIN1Q6K0P9 492 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 SPAG16Q8N0X2 631 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 KLHL30-AS1Q8NEE0 82 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 OR4S2Q8NH73 311 aa16.99■□□□□ 0.31
SCN1B-206ENST00000638536 PGLYRP1O75594 196 aaPredicted RBP16.98■□□□□ 0.31
SCN1B-206ENST00000638536 PRSS8Q16651 343 aa16.98■□□□□ 0.31
SCN1B-206ENST00000638536 VMA21Q3ZAQ7 101 aa16.98■□□□□ 0.31
SCN1B-206ENST00000638536 ASPHD1Q5U4P2 390 aa16.98■□□□□ 0.31
SCN1B-206ENST00000638536 UNQ5815/PRO19632Q6UWF5 114 aa16.98■□□□□ 0.31
SCN1B-206ENST00000638536 SMIM4Q8WVI0 70 aa16.98■□□□□ 0.31
SCN1B-206ENST00000638536 ZNF430Q9H8G1 570 aaPredicted RBP16.98■□□□□ 0.31
SCN1B-206ENST00000638536 CNIH1O95406 144 aa16.97■□□□□ 0.31
SCN1B-206ENST00000638536 RLN1P04808 185 aa16.97■□□□□ 0.31
SCN1B-206ENST00000638536 DEFB136Q30KP8 78 aa16.97■□□□□ 0.31
SCN1B-206ENST00000638536 FOXB2Q5VYV0 432 aa16.97■□□□□ 0.31
SCN1B-206ENST00000638536 FAAP20Q6NZ36 180 aa16.97■□□□□ 0.31
SCN1B-206ENST00000638536 SSX9Q7RTT3 188 aa16.97■□□□□ 0.31
SCN1B-206ENST00000638536 C1QL4Q86Z23 238 aa16.97■□□□□ 0.31
SCN1B-206ENST00000638536 MYOZ3Q8TDC0 251 aa16.97■□□□□ 0.31
SCN1B-206ENST00000638536 C15orf40Q8WUR7 153 aa16.97■□□□□ 0.31
SCN1B-206ENST00000638536 NUDT19A8MXV4 375 aa16.96■□□□□ 0.31
SCN1B-206ENST00000638536 ZNF701M0R085 212 aaPredicted RBP16.96■□□□□ 0.31
SCN1B-206ENST00000638536 APELAP0DMC3 54 aa16.96■□□□□ 0.31
SCN1B-206ENST00000638536 PHLDA2Q53GA4 152 aa16.96■□□□□ 0.31
SCN1B-206ENST00000638536 AKIRIN2Q53H80 203 aa16.96■□□□□ 0.31
SCN1B-206ENST00000638536 ZNF695Q8IW36 515 aa16.96■□□□□ 0.31
SCN1B-206ENST00000638536 TMEM229BQ8NBD8 167 aa16.96■□□□□ 0.31
SCN1B-206ENST00000638536 PRKDCP78527 4128 aaKnown RBP16.96■□□□□ 0.31
SCN1B-206ENST00000638536 G3V4G9 280 aa16.96■□□□□ 0.3
SCN1B-206ENST00000638536 CTDSPLO15194 276 aa16.96■□□□□ 0.3
SCN1B-206ENST00000638536 CD74P04233 296 aa16.96■□□□□ 0.3
SCN1B-206ENST00000638536 CDX1P47902 265 aaPredicted RBP16.96■□□□□ 0.3
SCN1B-206ENST00000638536 RAB9AP51151 201 aa16.96■□□□□ 0.3
SCN1B-206ENST00000638536 TNXAQ16473 311 aa16.96■□□□□ 0.3
SCN1B-206ENST00000638536 ACTBL2Q562R1 376 aa16.96■□□□□ 0.3
SCN1B-206ENST00000638536 RNASE10Q5GAN6 216 aaKnown RBP16.96■□□□□ 0.3
SCN1B-206ENST00000638536 C10orf55Q5SWW7 151 aa16.96■□□□□ 0.3
SCN1B-206ENST00000638536 PUSL1Q8N0Z8 303 aaKnown RBP16.96■□□□□ 0.3
SCN1B-206ENST00000638536 RSRP1Q9BUV0 290 aa16.96■□□□□ 0.3
SCN1B-206ENST00000638536 GNB4Q9HAV0 340 aa16.96■□□□□ 0.3
SCN1B-206ENST00000638536 FOXA2Q9Y261 457 aaPredicted RBP16.96■□□□□ 0.3
SCN1B-206ENST00000638536 DPPA5A6NC42 116 aa16.95■□□□□ 0.3
SCN1B-206ENST00000638536 GPR31O00270 319 aa16.95■□□□□ 0.3
SCN1B-206ENST00000638536 LHFPL1Q86WI0 220 aa16.95■□□□□ 0.3
SCN1B-206ENST00000638536 ZNF491Q8N8L2 437 aa16.95■□□□□ 0.3
SCN1B-206ENST00000638536 OR5T1Q8NG75 326 aa16.95■□□□□ 0.3
SCN1B-206ENST00000638536 RAX2Q96IS3 184 aa16.95■□□□□ 0.3
SCN1B-206ENST00000638536 RHOVQ96L33 236 aa16.95■□□□□ 0.3
SCN1B-206ENST00000638536 FABP12A6NFH5 140 aa16.94■□□□□ 0.3
SCN1B-206ENST00000638536 E7EUB6 86 aa16.94■□□□□ 0.3
SCN1B-206ENST00000638536 S1PR2O95136 353 aa16.94■□□□□ 0.3
SCN1B-206ENST00000638536 PF4P02776 101 aa16.94■□□□□ 0.3
SCN1B-206ENST00000638536 ZNF735P0CB33 412 aa16.94■□□□□ 0.3
SCN1B-206ENST00000638536 KIR2DS2P43631 304 aa16.94■□□□□ 0.3
SCN1B-206ENST00000638536 MRPS10P82664 201 aaKnown RBP16.94■□□□□ 0.3
SCN1B-206ENST00000638536 TMEM267Q0VDI3 215 aaPredicted RBP16.94■□□□□ 0.3
SCN1B-206ENST00000638536 CATR1Q13166 79 aa16.94■□□□□ 0.3
SCN1B-206ENST00000638536 STEAP1BQ6NZ63 245 aa16.94■□□□□ 0.3
SCN1B-206ENST00000638536 TMEM65Q6PI78 240 aa16.94■□□□□ 0.3
SCN1B-206ENST00000638536 MRGPRFQ96AM1 343 aa16.94■□□□□ 0.3
SCN1B-206ENST00000638536 MS4A10Q96PG2 267 aa16.94■□□□□ 0.3
SCN1B-206ENST00000638536 OR5B12Q96R08 314 aa16.94■□□□□ 0.3
SCN1B-206ENST00000638536 MSGN1A6NI15 193 aa16.93■□□□□ 0.3
SCN1B-206ENST00000638536 RBFOX2O43251 390 aaKnown RBP eCLIP16.93■□□□□ 0.31e-6■■■■□ 22.2
SCN1B-206ENST00000638536 KBTBD11O94819 623 aa16.93■□□□□ 0.3
SCN1B-206ENST00000638536 OR2A4O95047 310 aa16.93■□□□□ 0.3
SCN1B-206ENST00000638536 MYOD1P15172 320 aa16.93■□□□□ 0.3
SCN1B-206ENST00000638536 RPA2P15927 270 aa16.93■□□□□ 0.3
SCN1B-206ENST00000638536 PI3P19957 117 aa16.93■□□□□ 0.3
SCN1B-206ENST00000638536 TAS2R19P59542 299 aa16.93■□□□□ 0.3
SCN1B-206ENST00000638536 ZNF585BQ52M93 769 aa16.93■□□□□ 0.3
SCN1B-206ENST00000638536 OXLD1Q5BKU9 147 aa16.93■□□□□ 0.3
SCN1B-206ENST00000638536 MRPL41Q8IXM3 137 aaKnown RBP16.93■□□□□ 0.3
SCN1B-206ENST00000638536 WFDC9Q8NEX5 89 aa16.93■□□□□ 0.3
SCN1B-206ENST00000638536 OR2A7Q96R45 310 aa16.93■□□□□ 0.3
SCN1B-206ENST00000638536 V9GYH0 126 aa16.93■□□□□ 0.3
SCN1B-206ENST00000638536 TRAV3A0A0B4J244 114 aa16.92■□□□□ 0.3
SCN1B-206ENST00000638536 RAB3DO95716 219 aa16.92■□□□□ 0.3
SCN1B-206ENST00000638536 IFNA6P05013 189 aa16.92■□□□□ 0.3
SCN1B-206ENST00000638536 UCP3P55916 312 aa16.92■□□□□ 0.3
SCN1B-206ENST00000638536 TCTEX1D1Q8N7M0 179 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms