RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 OR5M8Q8NGP6 311 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 R3HDM4Q96D70 268 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 RHOVQ96L33 236 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 C2orf50Q96LR7 162 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 TSNAXQ99598 290 aaKnown RBP10.76□□□□□ -0.69
LINC00643-207ENST00000637212 SPIN2AQ99865 258 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 SPIN2BQ9BPZ2 258 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 ZNF436Q9C0F3 470 aaPredicted RBP10.76□□□□□ -0.69
LINC00643-207ENST00000637212 PRDM13Q9H4Q3 707 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 CACFD1Q9UGQ2 172 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 VPS13CQ709C8 3753 aa10.76□□□□□ -0.69
LINC00643-207ENST00000637212 IGHV3-72A0A0B4J1Y9 119 aa10.75□□□□□ -0.69
LINC00643-207ENST00000637212 C13orf42A0A1B0GVH6 325 aa10.75□□□□□ -0.69
LINC00643-207ENST00000637212 C5orf51A6NDU8 294 aa10.75□□□□□ -0.69
LINC00643-207ENST00000637212 MARCH11A6NNE9 402 aa10.75□□□□□ -0.69
LINC00643-207ENST00000637212 SRRM4A7MD48 611 aaKnown RBP10.75□□□□□ -0.69
LINC00643-207ENST00000637212 IL6RP08887 468 aaPredicted RBP10.75□□□□□ -0.69
LINC00643-207ENST00000637212 FGF2P09038 288 aa10.75□□□□□ -0.69
LINC00643-207ENST00000637212 CXCL3P19876 107 aa10.75□□□□□ -0.69
LINC00643-207ENST00000637212 G6PCP35575 357 aa10.75□□□□□ -0.69
LINC00643-207ENST00000637212 TEX45Q8NA69 505 aa10.75□□□□□ -0.69
LINC00643-207ENST00000637212 NPBQ8NG41 125 aa10.75□□□□□ -0.69
LINC00643-207ENST00000637212 OR8H1Q8NGG4 311 aa10.75□□□□□ -0.69
LINC00643-207ENST00000637212 OR4A5Q8NH83 315 aa10.75□□□□□ -0.69
LINC00643-207ENST00000637212 RNASE11Q8TAA1 199 aaKnown RBP10.75□□□□□ -0.69
LINC00643-207ENST00000637212 VSTM2AQ8TAG5 236 aa10.75□□□□□ -0.69
LINC00643-207ENST00000637212 GPR146Q96CH1 333 aa10.75□□□□□ -0.69
LINC00643-207ENST00000637212 COA4Q9NYJ1 87 aa10.75□□□□□ -0.69
LINC00643-207ENST00000637212 FAM25EA8MYX2 175 aa10.74□□□□□ -0.69
LINC00643-207ENST00000637212 SPDEFO95238 335 aa10.74□□□□□ -0.69
LINC00643-207ENST00000637212 LY6G6DO95868 133 aa10.74□□□□□ -0.69
LINC00643-207ENST00000637212 IGKV1D-33P01593 117 aa10.74□□□□□ -0.69
LINC00643-207ENST00000637212 IGKV1-33P01594 117 aa10.74□□□□□ -0.69
LINC00643-207ENST00000637212 SNRNP70P08621 437 aaKnown RBP10.74□□□□□ -0.69
LINC00643-207ENST00000637212 GIPP09681 153 aaPredicted RBP10.74□□□□□ -0.69
LINC00643-207ENST00000637212 AKR1C2P52895 323 aa10.74□□□□□ -0.69
LINC00643-207ENST00000637212 H2BFSP57053 126 aa10.74□□□□□ -0.69
LINC00643-207ENST00000637212 UBE2KP61086 200 aa10.74□□□□□ -0.69
LINC00643-207ENST00000637212 SCGB2A2Q13296 93 aa10.74□□□□□ -0.69
LINC00643-207ENST00000637212 IAH1Q2TAA2 248 aaPredicted RBP10.74□□□□□ -0.69
LINC00643-207ENST00000637212 VMA21Q3ZAQ7 101 aa10.74□□□□□ -0.69
LINC00643-207ENST00000637212 PUSL1Q8N0Z8 303 aaKnown RBP10.74□□□□□ -0.69
LINC00643-207ENST00000637212 Q8N6K4 173 aa10.74□□□□□ -0.69
LINC00643-207ENST00000637212 DMBX1Q8NFW5 382 aa10.74□□□□□ -0.69
LINC00643-207ENST00000637212 EAF1Q96JC9 268 aaPredicted RBP10.74□□□□□ -0.69
LINC00643-207ENST00000637212 HARBI1Q96MB7 349 aa10.74□□□□□ -0.69
LINC00643-207ENST00000637212 NMES1Q9C002 83 aa10.74□□□□□ -0.69
LINC00643-207ENST00000637212 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.74□□□□□ -0.69
LINC00643-207ENST00000637212 BET1LQ9NYM9 111 aa10.74□□□□□ -0.69
LINC00643-207ENST00000637212 SETD2Q9BYW2 2564 aaPredicted RBP10.73□□□□□ -0.69
LINC00643-207ENST00000637212 ABCA2Q9BZC7 2435 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 PITX3O75364 302 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 CCNKO75909 580 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 SNAPC5O75971 98 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 SIX6O95475 246 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 IGLV2-23P01705 113 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 SRP14P37108 136 aaKnown RBP10.73□□□□□ -0.69
LINC00643-207ENST00000637212 RAP2BP61225 183 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 IL15RAQ13261 267 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 SMCO1Q147U7 214 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 PSG5Q15238 335 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 TUSC1Q2TAM9 212 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 LRRC75BQ2VPJ9 315 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 THOC7Q6I9Y2 204 aaKnown RBP10.73□□□□□ -0.69
LINC00643-207ENST00000637212 AKAP14Q86UN6 197 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 PIFOQ8TCI5 191 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 RITA1Q96K30 269 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 OR10C1Q96KK4 312 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 SSX3Q99909 188 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 PDCD10Q9BUL8 212 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 FKBP11Q9NYL4 201 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 C1RLQ9NZP8 487 aa10.73□□□□□ -0.69
LINC00643-207ENST00000637212 CR1P17927 2039 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 A0A0G2JRQ6 117 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 MPTX1A8MV57 137 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 UPK2O00526 184 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 CCSO14618 274 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 PFDN1O60925 122 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 CRYGBP07316 175 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 PAX6P26367 422 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 HES1Q14469 280 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 DEFB112Q30KQ8 113 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 AARDQ4LEZ3 155 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 OR4A47Q6IF82 309 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 CLEC9AQ6UXN8 241 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 Q6YL49 198 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 Q6ZRM9 215 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 BCL6BQ8N143 479 aaPredicted RBP10.72□□□□□ -0.69
LINC00643-207ENST00000637212 ZBTB8BQ8NAP8 495 aaPredicted RBP10.72□□□□□ -0.69
LINC00643-207ENST00000637212 OR4A16Q8NH70 328 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 TMEM167AQ8TBQ9 72 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 FYTTD1Q96QD9 318 aaKnown RBP10.72□□□□□ -0.69
LINC00643-207ENST00000637212 NEURL2Q9BR09 285 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 RANBP3Q9H6Z4 567 aaPredicted RBP10.72□□□□□ -0.69
LINC00643-207ENST00000637212 ZFP57Q9NU63 452 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 TMEM140Q9NV12 185 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 GSKIPQ9P0R6 139 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 PRNDQ9UKY0 176 aa10.72□□□□□ -0.69
LINC00643-207ENST00000637212 SOX21Q9Y651 276 aaPredicted RBP10.72□□□□□ -0.69
LINC00643-207ENST00000637212 MAP1AP78559 2803 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms