RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 CENPVL3A0A0U1RRI6 287 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 K7EPK0 472 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 APOA2P02652 100 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 RRASP10301 218 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 PAX6P26367 422 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 DHRS7BQ6IAN0 325 aaPredicted RBP17.01■□□□□ 0.31
CLN8-213ENST00000637156 SLC7A5P1Q8MH63 180 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 FAM71E2Q8N5Q1 922 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 LINC01356Q8N9X3 169 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 DMBX1Q8NFW5 382 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 RITA1Q96K30 269 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 RHOVQ96L33 236 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 HSPB11Q9Y547 144 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 CCDC168Q8NDH2 2452 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 ARPC5O15511 151 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 NXPH3O95157 252 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 MC5RP33032 325 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 NKX2-1P43699 371 aaPredicted RBP17.01■□□□□ 0.31
CLN8-213ENST00000637156 PRSS54Q6PEW0 395 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 MOB3BQ86TA1 216 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 WFDC11Q8NEX6 87 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 OR1S1Q8NH92 325 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 FLYWCH2Q96CP2 140 aaKnown RBP17.01■□□□□ 0.31
CLN8-213ENST00000637156 COA4Q9NYJ1 87 aa17.01■□□□□ 0.31
CLN8-213ENST00000637156 LSM5Q9Y4Y9 91 aaKnown RBP17.01■□□□□ 0.31
CLN8-213ENST00000637156 A0A1W2PPI3 338 aa17■□□□□ 0.31
CLN8-213ENST00000637156 ST8SIA3O43173 380 aa17■□□□□ 0.31
CLN8-213ENST00000637156 DEDDO75618 318 aa17■□□□□ 0.31
CLN8-213ENST00000637156 OR9G9P0C7N8 305 aa17■□□□□ 0.31
CLN8-213ENST00000637156 LYL1P12980 280 aa17■□□□□ 0.31
CLN8-213ENST00000637156 CXCL2P19875 107 aa17■□□□□ 0.31
CLN8-213ENST00000637156 CEACAM3P40198 252 aa17■□□□□ 0.31
CLN8-213ENST00000637156 TMEM177Q53S58 311 aa17■□□□□ 0.31
CLN8-213ENST00000637156 PDPNQ86YL7 162 aa17■□□□□ 0.31
CLN8-213ENST00000637156 DYNAPQ8N1N2 210 aa17■□□□□ 0.31
CLN8-213ENST00000637156 AJUBAQ96IF1 538 aa17■□□□□ 0.31
CLN8-213ENST00000637156 C7orf69Q9H7B7 122 aa17■□□□□ 0.31
CLN8-213ENST00000637156 NSG2Q9Y328 171 aa17■□□□□ 0.31
CLN8-213ENST00000637156 WASHC3Q9Y3C0 194 aa17■□□□□ 0.31
CLN8-213ENST00000637156 AUP1Q9Y679 476 aa17■□□□□ 0.31
CLN8-213ENST00000637156 TXNL1O43396 289 aa16.99■□□□□ 0.31
CLN8-213ENST00000637156 HRASP01112 189 aa16.99■□□□□ 0.31
CLN8-213ENST00000637156 LGALS4P56470 323 aa16.99■□□□□ 0.31
CLN8-213ENST00000637156 POLR2GP62487 172 aaKnown RBP eCLIP16.99■□□□□ 0.31
CLN8-213ENST00000637156 SSX2Q16385 188 aa16.99■□□□□ 0.31
CLN8-213ENST00000637156 POU2AF1Q16633 256 aa16.99■□□□□ 0.31
CLN8-213ENST00000637156 OR4C13Q8NGP0 309 aa16.99■□□□□ 0.31
CLN8-213ENST00000637156 OSR1Q8TAX0 266 aaPredicted RBP16.99■□□□□ 0.31
CLN8-213ENST00000637156 MAGT1Q9H0U3 335 aa16.99■□□□□ 0.31
CLN8-213ENST00000637156 TMEM140Q9NV12 185 aa16.99■□□□□ 0.31
CLN8-213ENST00000637156 POMT1Q9Y6A1 747 aa16.99■□□□□ 0.31
CLN8-213ENST00000637156 TRAV3A0A0B4J244 114 aa16.99■□□□□ 0.31
CLN8-213ENST00000637156 TRAV20A0A0B4J274 112 aa16.99■□□□□ 0.31
CLN8-213ENST00000637156 IL6RP08887 468 aaPredicted RBP16.99■□□□□ 0.31
CLN8-213ENST00000637156 ERVK-16P61578 105 aa16.99■□□□□ 0.31
CLN8-213ENST00000637156 MINOS1Q5TGZ0 78 aa16.99■□□□□ 0.31
CLN8-213ENST00000637156 PIP4P2Q8N4L2 257 aa16.99■□□□□ 0.31
CLN8-213ENST00000637156 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.99■□□□□ 0.31
CLN8-213ENST00000637156 TNFSF18Q9UNG2 199 aa16.99■□□□□ 0.31
CLN8-213ENST00000637156 RCL1Q9Y2P8 373 aaKnown RBP16.99■□□□□ 0.31
CLN8-213ENST00000637156 MINOS1-NBL1R4GNA1 71 aa16.99■□□□□ 0.31
CLN8-213ENST00000637156 SHOXO15266 292 aa16.98■□□□□ 0.31
CLN8-213ENST00000637156 AVPP01185 164 aa16.98■□□□□ 0.31
CLN8-213ENST00000637156 RLN2P04090 185 aa16.98■□□□□ 0.31
CLN8-213ENST00000637156 TMEM249Q2WGJ8 235 aa16.98■□□□□ 0.31
CLN8-213ENST00000637156 OR4A47Q6IF82 309 aa16.98■□□□□ 0.31
CLN8-213ENST00000637156 ZFP57Q9NU63 452 aa16.98■□□□□ 0.31
CLN8-213ENST00000637156 ZFHX3Q15911 3703 aa16.98■□□□□ 0.31
CLN8-213ENST00000637156 TIMM23O14925 209 aa16.97■□□□□ 0.31
CLN8-213ENST00000637156 TGFAP01135 160 aa16.97■□□□□ 0.31
CLN8-213ENST00000637156 RAB13P51153 203 aa16.97■□□□□ 0.31
CLN8-213ENST00000637156 DCUN1D4Q92564 292 aa16.97■□□□□ 0.31
CLN8-213ENST00000637156 MFFQ9GZY8 342 aa16.97■□□□□ 0.31
CLN8-213ENST00000637156 CHST1O43916 411 aa16.97■□□□□ 0.31
CLN8-213ENST00000637156 PET100P0DJ07 73 aa16.97■□□□□ 0.31
CLN8-213ENST00000637156 IGHV4-31P0DP07 118 aa16.97■□□□□ 0.31
CLN8-213ENST00000637156 GATA3P23771 443 aa16.97■□□□□ 0.31
CLN8-213ENST00000637156 RPS16P62249 146 aaKnown RBP16.97■□□□□ 0.31
CLN8-213ENST00000637156 RELBQ01201 579 aa16.97■□□□□ 0.31
CLN8-213ENST00000637156 CFHR4Q92496 578 aa16.97■□□□□ 0.31
CLN8-213ENST00000637156 MALSU1Q96EH3 234 aa16.97■□□□□ 0.31
CLN8-213ENST00000637156 HARBI1Q96MB7 349 aa16.97■□□□□ 0.31
CLN8-213ENST00000637156 FOXC2Q99958 501 aa16.97■□□□□ 0.31
CLN8-213ENST00000637156 C11orf1Q9H5F2 150 aa16.97■□□□□ 0.31
CLN8-213ENST00000637156 TBL2Q9Y4P3 447 aaKnown RBP16.97■□□□□ 0.31
CLN8-213ENST00000637156 RNF222A6NCQ9 220 aa16.96■□□□□ 0.31
CLN8-213ENST00000637156 FAM90A9PA6NNJ1 464 aa16.96■□□□□ 0.31
CLN8-213ENST00000637156 IGLV2-23P01705 113 aa16.96■□□□□ 0.31
CLN8-213ENST00000637156 HABP2Q14520 560 aaPredicted RBP16.96■□□□□ 0.31
CLN8-213ENST00000637156 OR8H3Q8N146 312 aa16.96■□□□□ 0.31
CLN8-213ENST00000637156 MS4A7Q9GZW8 240 aaPredicted RBP16.96■□□□□ 0.31
CLN8-213ENST00000637156 AKAP9Q99996 3911 aa16.95■□□□□ 0.3
CLN8-213ENST00000637156 IGHV3OR16-10A0A075B7F0 116 aa16.95■□□□□ 0.3
CLN8-213ENST00000637156 NPFFO15130 113 aa16.95■□□□□ 0.3
CLN8-213ENST00000637156 TMEM50AO95807 157 aa16.95■□□□□ 0.3
CLN8-213ENST00000637156 SAA4P35542 130 aa16.95■□□□□ 0.3
CLN8-213ENST00000637156 ARHGDIBP52566 201 aa16.95■□□□□ 0.3
CLN8-213ENST00000637156 AP2S1P53680 142 aaPredicted RBP16.95■□□□□ 0.3
CLN8-213ENST00000637156 QTRT1Q9BXR0 403 aaKnown RBP16.95■□□□□ 0.3
CLN8-213ENST00000637156 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.95■□□□□ 0.34e-15■■■■□ 21.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms