RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 RNF185Q96GF1 192 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 RITA1Q96K30 269 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 PGLYRP4Q96LB8 373 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 HYLS1Q96M11 299 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 FAM218AQ96MZ4 157 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 NMNAT3Q96T66 252 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 SDF2Q99470 211 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 S100A13Q99584 98 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 PAXXQ9BUH6 204 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 TMEM191AQ9H0A3 160 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 POLR2J3Q9H1A7 115 aaKnown RBP2.35□□□□□ -2.03
VIM-210ENST00000637053 TCEAL2Q9H3H9 227 aaPredicted RBP2.35□□□□□ -2.03
VIM-210ENST00000637053 RPRMQ9NS64 109 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 DEPPQ9NTK1 212 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 ZNF586Q9NXT0 402 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 NUFIP1Q9UHK0 495 aaKnown RBP2.35□□□□□ -2.03
VIM-210ENST00000637053 SIGLEC7Q9Y286 467 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 FOCADQ5VW36 1801 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 XIRP1Q702N8 1843 aaKnown RBP2.35□□□□□ -2.03
VIM-210ENST00000637053 ZMYM2Q9UBW7 1377 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 DICER1Q9UPY3 1922 aaKnown RBP2.34□□□□□ -2.03
VIM-210ENST00000637053 TRAPPC8Q9Y2L5 1435 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 MYOM2P54296 1465 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 CASZ1Q86V15 1759 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 IGLV9-49A0A0B4J1Y8 123 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 PGPA6NDG6 321 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 GABARAPH6UMI1 98 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 UPK2O00526 184 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 FFAR1O14842 300 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 MYL12BO14950 172 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 ANGPTL7O43827 346 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 SRSF10O75494 262 aaKnown RBP2.34□□□□□ -2.03
VIM-210ENST00000637053 NCR2O95944 276 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 IGHV3-9P01782 118 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 IGLC1P0CG04 106 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 IGHV4-30-4P0DP06 118 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 GZMBP10144 247 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 GADD45AP24522 165 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 FCGR2CP31995 323 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 CD70P32970 193 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 RBMXP38159 391 aaKnown RBP2.34□□□□□ -2.03
VIM-210ENST00000637053 CSRP3P50461 194 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 DIO3P55073 304 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 PPP1CAP62136 330 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 RPS23P62266 143 aaKnown RBP2.34□□□□□ -2.03
VIM-210ENST00000637053 FKBP1AP62942 108 aaKnown RBP2.34□□□□□ -2.03
VIM-210ENST00000637053 EIF3IQ13347 325 aaKnown RBP2.34□□□□□ -2.03
VIM-210ENST00000637053 IQCJQ1A5X6 159 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 VMA21Q3ZAQ7 101 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 ABCA11PQ4W5N1 156 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 TMEM236Q5W0B7 351 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 LCN12Q6JVE5 192 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 LCN15Q6UWW0 184 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 CLEC20AQ6ZU45 233 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 FOXL2NBQ6ZUU3 175 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 PIP4P1Q86T03 277 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 LRRTM1Q86UE6 522 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 ZNF429Q86V71 674 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 HIST3H2BBQ8N257 126 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 RNF175Q8N4F7 328 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 LINC00471Q8N535 108 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 TEX29Q8N6K0 151 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 ZNF491Q8N8L2 437 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 C11orf72Q8NBR9 251 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 OR5D14Q8NGL3 314 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 OR8D4Q8NGM9 314 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 OR52P1PQ8NH57 321 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 OSR1Q8TAX0 266 aaPredicted RBP2.34□□□□□ -2.03
VIM-210ENST00000637053 LMX1AQ8TE12 382 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 CHCHD10Q8WYQ3 142 aaPredicted RBP2.34□□□□□ -2.03
VIM-210ENST00000637053 FXYD5Q96DB9 178 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 MRPS24Q96EL2 167 aaKnown RBP2.34□□□□□ -2.03
VIM-210ENST00000637053 ZC2HC1AQ96GY0 325 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 SLC25A21Q9BQT8 299 aaPredicted RBP2.34□□□□□ -2.03
VIM-210ENST00000637053 RNF126Q9BV68 326 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 SPANXDQ9BXN6 97 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 MRPL32Q9BYC8 188 aaKnown RBP2.34□□□□□ -2.03
VIM-210ENST00000637053 LIME1Q9H400 295 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 TUBA4BQ9H853 241 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 PLAC1Q9HBJ0 212 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 SMCO4Q9NRQ5 59 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 HEBP1Q9NRV9 189 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 BET1LQ9NYM9 111 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 MDFICQ9P1T7 246 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 SPRR3Q9UBC9 169 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 TRMT112Q9UI30 125 aaKnown RBP2.34□□□□□ -2.03
VIM-210ENST00000637053 PCTPQ9UKL6 214 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 ANAPC10Q9UM13 185 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 ZNF443Q9Y2A4 671 aaPredicted RBP2.34□□□□□ -2.03
VIM-210ENST00000637053 PYGO1Q9Y3Y4 419 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 V9GY05 133 aa2.34□□□□□ -2.03
VIM-210ENST00000637053 KIF21AQ7Z4S6 1674 aa2.34□□□□□ -2.04
VIM-210ENST00000637053 BCORL1Q5H9F3 1711 aa2.34□□□□□ -2.04
VIM-210ENST00000637053 PRDM15P57071 1507 aaPredicted RBP2.33□□□□□ -2.04
VIM-210ENST00000637053 ZNF106Q9H2Y7 1883 aaKnown RBP2.33□□□□□ -2.04
VIM-210ENST00000637053 TDRD15B5MCY1 1934 aaKnown RBP2.33□□□□□ -2.04
VIM-210ENST00000637053 BAZ2AQ9UIF9 1905 aaKnown RBP2.33□□□□□ -2.04
VIM-210ENST00000637053 TMEM131LA2VDJ0 1609 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 A0A087X0T9 212 aa2.33□□□□□ -2.04
VIM-210ENST00000637053 TRAV8-3A0A0A6YYJ7 113 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms