RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 TEX13DA0A0J9YY54 714 aaPredicted RBP12.69□□□□□ -0.38
CLN6-216ENST00000636876 C3orf85A0A1B0GTC6 90 aa12.69□□□□□ -0.38
CLN6-216ENST00000636876 HPRT1P00492 218 aa12.69□□□□□ -0.38
CLN6-216ENST00000636876 HRASP01112 189 aa12.69□□□□□ -0.38
CLN6-216ENST00000636876 SLC6A1P30531 599 aa12.69□□□□□ -0.38
CLN6-216ENST00000636876 LPAR6P43657 344 aa12.69□□□□□ -0.38
CLN6-216ENST00000636876 UBE2KP61086 200 aa12.69□□□□□ -0.38
CLN6-216ENST00000636876 PLGLAQ15195 96 aa12.69□□□□□ -0.38
CLN6-216ENST00000636876 VMA21Q3ZAQ7 101 aa12.69□□□□□ -0.38
CLN6-216ENST00000636876 Q6ZS46 218 aa12.69□□□□□ -0.38
CLN6-216ENST00000636876 TMED4Q7Z7H5 227 aa12.69□□□□□ -0.38
CLN6-216ENST00000636876 OR4F5Q8NH21 305 aa12.69□□□□□ -0.38
CLN6-216ENST00000636876 TP53RKQ96S44 253 aa12.69□□□□□ -0.38
CLN6-216ENST00000636876 C19orf24Q9BVV8 132 aa12.69□□□□□ -0.38
CLN6-216ENST00000636876 C16orf95Q9H693 158 aa12.69□□□□□ -0.38
CLN6-216ENST00000636876 NAA60Q9H7X0 242 aa12.69□□□□□ -0.38
CLN6-216ENST00000636876 COMMD9Q9P000 198 aa12.69□□□□□ -0.38
CLN6-216ENST00000636876 B3GALNT1O75752 331 aa12.68□□□□□ -0.38
CLN6-216ENST00000636876 HLA-DRB1P01911 266 aa12.68□□□□□ -0.38
CLN6-216ENST00000636876 SERPINE2P07093 398 aa12.68□□□□□ -0.38
CLN6-216ENST00000636876 CRYGBP07316 175 aa12.68□□□□□ -0.38
CLN6-216ENST00000636876 SAA1P0DJI8 122 aaPredicted RBP12.68□□□□□ -0.38
CLN6-216ENST00000636876 AKR1C4P17516 323 aa12.68□□□□□ -0.38
CLN6-216ENST00000636876 TAS2R31P59538 309 aa12.68□□□□□ -0.38
CLN6-216ENST00000636876 C9orf152Q5JTZ5 239 aa12.68□□□□□ -0.38
CLN6-216ENST00000636876 CENPSQ8N2Z9 138 aa12.68□□□□□ -0.38
CLN6-216ENST00000636876 TEX45Q8NA69 505 aa12.68□□□□□ -0.38
CLN6-216ENST00000636876 RHOVQ96L33 236 aa12.68□□□□□ -0.38
CLN6-216ENST00000636876 AIFM2Q9BRQ8 373 aa12.68□□□□□ -0.38
CLN6-216ENST00000636876 TPSG1Q9NRR2 321 aa12.68□□□□□ -0.38
CLN6-216ENST00000636876 FLVCR2Q9UPI3 526 aa12.68□□□□□ -0.38
CLN6-216ENST00000636876 SIGLEC9Q9Y336 463 aa12.68□□□□□ -0.38
CLN6-216ENST00000636876 TENM1Q9UKZ4 2725 aa12.68□□□□□ -0.38
CLN6-216ENST00000636876 PLXNB1O43157 2135 aa12.68□□□□□ -0.38
CLN6-216ENST00000636876 TNCP24821 2201 aa12.68□□□□□ -0.38
CLN6-216ENST00000636876 FAM240BA0A1B0GVZ2 78 aa12.67□□□□□ -0.38
CLN6-216ENST00000636876 TMEM89A2RUT3 159 aa12.67□□□□□ -0.38
CLN6-216ENST00000636876 NQO2P16083 231 aa12.67□□□□□ -0.38
CLN6-216ENST00000636876 UCP1P25874 307 aa12.67□□□□□ -0.38
CLN6-216ENST00000636876 DEFA1P59665 94 aa12.67□□□□□ -0.38
CLN6-216ENST00000636876 DEFA3P59666 94 aa12.67□□□□□ -0.38
CLN6-216ENST00000636876 POU2AF1Q16633 256 aa12.67□□□□□ -0.38
CLN6-216ENST00000636876 SP6Q3SY56 376 aa12.67□□□□□ -0.38
CLN6-216ENST00000636876 LIN54Q6MZP7 749 aa12.67□□□□□ -0.38
CLN6-216ENST00000636876 SLC25A42Q86VD7 318 aa12.67□□□□□ -0.38
CLN6-216ENST00000636876 SGPP2Q8IWX5 399 aa12.67□□□□□ -0.38
CLN6-216ENST00000636876 VKORC1L1Q8N0U8 176 aa12.67□□□□□ -0.38
CLN6-216ENST00000636876 OR2T6Q8NHC8 308 aa12.67□□□□□ -0.38
CLN6-216ENST00000636876 R3HDM4Q96D70 268 aa12.67□□□□□ -0.38
CLN6-216ENST00000636876 FCN1O00602 326 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 ARPC1BO15143 372 aaKnown RBP12.66□□□□□ -0.38
CLN6-216ENST00000636876 IGKV1-39P01597 117 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 IGHG2P01859 326 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 IGKV1D-39P04432 117 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 TCRBP04435 133 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 OR5AC1P0C628 307 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 RPA2P15927 270 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 MDKP21741 143 aaPredicted RBP12.66□□□□□ -0.38
CLN6-216ENST00000636876 ERVK-16P61578 105 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 SUPT4H1P63272 117 aaKnown RBP12.66□□□□□ -0.38
CLN6-216ENST00000636876 FOXL1Q12952 345 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 TMEM128Q5BJH2 165 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 ARSJQ5FYB0 599 aaPredicted RBP12.66□□□□□ -0.38
CLN6-216ENST00000636876 SSX9Q7RTT3 188 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 PPP1R27Q86WC6 154 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 PUSL1Q8N0Z8 303 aaKnown RBP12.66□□□□□ -0.38
CLN6-216ENST00000636876 LINC01006Q8NI28 216 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 VSTM2AQ8TAG5 236 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 GALNT14Q96FL9 552 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 CLCC1Q96S66 551 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 HSPB9Q9BQS6 159 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 TMEM222Q9H0R3 208 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 BEX1Q9HBH7 125 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 KCNIP3Q9Y2W7 256 aa12.66□□□□□ -0.38
CLN6-216ENST00000636876 IGHV7-81A0A0B4J1V7 117 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 CLPSL1A2RUU4 121 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 MARCH11A6NNE9 402 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 KCNAB3O43448 404 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 OR2A4O95047 310 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 VDAC2P45880 294 aaPredicted RBP12.65□□□□□ -0.38
CLN6-216ENST00000636876 UBE2MP61081 183 aaKnown RBP12.65□□□□□ -0.38
CLN6-216ENST00000636876 DHODHQ02127 395 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 PJVKQ0ZLH3 352 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 PRSS8Q16651 343 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 MRGPRG-AS1Q2M3A8 158 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 TRIM16LQ309B1 348 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 TMEM95Q3KNT9 176 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 SLC35E3Q7Z769 313 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 DMBX1Q8NFW5 382 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 TMEM167AQ8TBQ9 72 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 GLYATL2Q8WU03 294 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 OR2A7Q96R45 310 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 C20orf85Q9H1P6 137 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 PALMDQ9NP74 551 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 SERTAD4Q9NUC0 356 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 MMP24Q9Y5R2 645 aa12.65□□□□□ -0.38
CLN6-216ENST00000636876 NBEAL1Q6ZS30 2694 aa12.64□□□□□ -0.39
CLN6-216ENST00000636876 A0A1B0GUS0 222 aa12.64□□□□□ -0.39
CLN6-216ENST00000636876 LINC01548A6NM66 108 aa12.64□□□□□ -0.39
CLN6-216ENST00000636876 KBTBD11O94819 623 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms