RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 SCAND1P57086 179 aa13.76□□□□□ -0.21
PNKP-225ENST00000636214 DEFA5Q01523 94 aa13.76□□□□□ -0.21
PNKP-225ENST00000636214 CDK10Q15131 360 aa13.76□□□□□ -0.21
PNKP-225ENST00000636214 RPEL1Q2QD12 228 aa13.76□□□□□ -0.21
PNKP-225ENST00000636214 OR2B11Q5JQS5 317 aa13.76□□□□□ -0.21
PNKP-225ENST00000636214 IDNKQ5T6J7 187 aa13.76□□□□□ -0.21
PNKP-225ENST00000636214 OVCH2Q7RTZ1 564 aa13.76□□□□□ -0.21
PNKP-225ENST00000636214 OR4S2Q8NH73 311 aa13.76□□□□□ -0.21
PNKP-225ENST00000636214 VSTM2AQ8TAG5 236 aa13.76□□□□□ -0.21
PNKP-225ENST00000636214 HSD17B10Q99714 261 aaKnown RBP13.76□□□□□ -0.21
PNKP-225ENST00000636214 OR51E2Q9H255 320 aa13.76□□□□□ -0.21
PNKP-225ENST00000636214 ZMAT4Q9H898 229 aa13.76□□□□□ -0.21
PNKP-225ENST00000636214 ETV7Q9Y603 341 aa13.76□□□□□ -0.21
PNKP-225ENST00000636214 H0Y980 276 aa13.75□□□□□ -0.21
PNKP-225ENST00000636214 SYNJ2BPP57105 145 aa13.75□□□□□ -0.21
PNKP-225ENST00000636214 SLC25A42Q86VD7 318 aa13.75□□□□□ -0.21
PNKP-225ENST00000636214 SGPP2Q8IWX5 399 aa13.75□□□□□ -0.21
PNKP-225ENST00000636214 SNAPC3Q92966 411 aa13.75□□□□□ -0.21
PNKP-225ENST00000636214 ZNF430Q9H8G1 570 aaPredicted RBP13.75□□□□□ -0.21
PNKP-225ENST00000636214 KMT2CQ8NEZ4 4911 aaKnown RBP13.75□□□□□ -0.21
PNKP-225ENST00000636214 TRAV18A0A075B6X5 111 aa13.74□□□□□ -0.21
PNKP-225ENST00000636214 DPPA5A6NC42 116 aa13.74□□□□□ -0.21
PNKP-225ENST00000636214 FAM223BA6NKX1 122 aa13.74□□□□□ -0.21
PNKP-225ENST00000636214 FRMD6-AS1P0C7T7 363 aa13.74□□□□□ -0.21
PNKP-225ENST00000636214 RHOGP84095 191 aa13.74□□□□□ -0.21
PNKP-225ENST00000636214 ATP5G2Q06055 141 aa13.74□□□□□ -0.21
PNKP-225ENST00000636214 NEDD8Q15843 81 aa13.74□□□□□ -0.21
PNKP-225ENST00000636214 ZNF343Q6P1L6 599 aa13.74□□□□□ -0.21
PNKP-225ENST00000636214 HAPLN4Q86UW8 402 aa13.74□□□□□ -0.21
PNKP-225ENST00000636214 FAM223AQ8IWN6 122 aa13.74□□□□□ -0.21
PNKP-225ENST00000636214 ADAD2Q8NCV1 583 aaKnown RBP13.74□□□□□ -0.21
PNKP-225ENST00000636214 OR9G4Q8NGQ1 327 aa13.74□□□□□ -0.21
PNKP-225ENST00000636214 DIABLOQ9NR28 239 aa13.74□□□□□ -0.21
PNKP-225ENST00000636214 SPATA2Q9UM82 520 aa13.74□□□□□ -0.21
PNKP-225ENST00000636214 TRIM64CA6NLI5 447 aa13.73□□□□□ -0.21
PNKP-225ENST00000636214 IGLV1-51P01701 117 aa13.73□□□□□ -0.21
PNKP-225ENST00000636214 KIR2DS2P43631 304 aa13.73□□□□□ -0.21
PNKP-225ENST00000636214 DYRK1AQ13627 763 aa13.73□□□□□ -0.21
PNKP-225ENST00000636214 KLF5Q13887 457 aaPredicted RBP13.73□□□□□ -0.21
PNKP-225ENST00000636214 SBSPONQ8IVN8 264 aa13.73□□□□□ -0.21
PNKP-225ENST00000636214 BEST4Q8NFU0 473 aa13.73□□□□□ -0.21
PNKP-225ENST00000636214 RCHY1Q96PM5 261 aa13.73□□□□□ -0.21
PNKP-225ENST00000636214 PEMTQ9UBM1 199 aa13.73□□□□□ -0.21
PNKP-225ENST00000636214 A0A0A6YYH2 397 aa13.72□□□□□ -0.21
PNKP-225ENST00000636214 IGKV1D-13A0A0B4J2D9 117 aa13.72□□□□□ -0.21
PNKP-225ENST00000636214 A6NJ64 397 aa13.72□□□□□ -0.21
PNKP-225ENST00000636214 OR2A4O95047 310 aa13.72□□□□□ -0.21
PNKP-225ENST00000636214 CLEC2LP0C7M8 214 aa13.72□□□□□ -0.21
PNKP-225ENST00000636214 IGKV1-13P0DP09 117 aa13.72□□□□□ -0.21
PNKP-225ENST00000636214 EXOSC2Q13868 293 aaKnown RBP13.72□□□□□ -0.21
PNKP-225ENST00000636214 TIMM50Q3ZCQ8 353 aa13.72□□□□□ -0.21
PNKP-225ENST00000636214 FAM209BQ5JX69 171 aa13.72□□□□□ -0.21
PNKP-225ENST00000636214 LCN12Q6JVE5 192 aa13.72□□□□□ -0.21
PNKP-225ENST00000636214 ZNF66Q6ZN08 573 aa13.72□□□□□ -0.21
PNKP-225ENST00000636214 SECTM1Q8WVN6 248 aa13.72□□□□□ -0.21
PNKP-225ENST00000636214 OR2A7Q96R45 310 aa13.72□□□□□ -0.21
PNKP-225ENST00000636214 TAS2R8Q9NYW2 309 aa13.72□□□□□ -0.21
PNKP-225ENST00000636214 C3orf84H3BNL1 204 aa13.71□□□□□ -0.21
PNKP-225ENST00000636214 SSX5O60225 188 aa13.71□□□□□ -0.21
PNKP-225ENST00000636214 KBTBD11O94819 623 aa13.71□□□□□ -0.21
PNKP-225ENST00000636214 HRASP01112 189 aa13.71□□□□□ -0.21
PNKP-225ENST00000636214 MRGPRG-AS1Q2M3A8 158 aa13.71□□□□□ -0.21
PNKP-225ENST00000636214 GTSCR1Q86UQ5 136 aa13.71□□□□□ -0.21
PNKP-225ENST00000636214 MFSD4AQ8N468 514 aa13.71□□□□□ -0.21
PNKP-225ENST00000636214 AIFM2Q9BRQ8 373 aa13.71□□□□□ -0.21
PNKP-225ENST00000636214 RNF167Q9H6Y7 350 aa13.71□□□□□ -0.21
PNKP-225ENST00000636214 VCX3AQ9NNX9 186 aa13.71□□□□□ -0.21
PNKP-225ENST00000636214 AKIP1Q9NQ31 210 aa13.71□□□□□ -0.21
PNKP-225ENST00000636214 TMEM127O75204 238 aa13.7□□□□□ -0.22
PNKP-225ENST00000636214 DHFRP00374 187 aa13.7□□□□□ -0.22
PNKP-225ENST00000636214 PRH1P02810 166 aa13.7□□□□□ -0.22
PNKP-225ENST00000636214 FCGR2CP31995 323 aa13.7□□□□□ -0.22
PNKP-225ENST00000636214 MAS1LP35410 378 aa13.7□□□□□ -0.22
PNKP-225ENST00000636214 CBX5P45973 191 aa13.7□□□□□ -0.22
PNKP-225ENST00000636214 RPL27AP46776 148 aaKnown RBP13.7□□□□□ -0.22
PNKP-225ENST00000636214 RPL30P62888 115 aaKnown RBP13.7□□□□□ -0.22
PNKP-225ENST00000636214 CATR1Q13166 79 aa13.7□□□□□ -0.22
PNKP-225ENST00000636214 KCTD21Q4G0X4 260 aa13.7□□□□□ -0.22
PNKP-225ENST00000636214 C10orf55Q5SWW7 151 aa13.7□□□□□ -0.22
PNKP-225ENST00000636214 CROCCP3Q8IVE0 287 aa13.7□□□□□ -0.22
PNKP-225ENST00000636214 VKORC1L1Q8N0U8 176 aa13.7□□□□□ -0.22
PNKP-225ENST00000636214 TTC9CQ8N5M4 171 aa13.7□□□□□ -0.22
PNKP-225ENST00000636214 NECAP1Q8NC96 275 aa13.7□□□□□ -0.22
PNKP-225ENST00000636214 OR13F1Q8NGS4 319 aa13.7□□□□□ -0.22
PNKP-225ENST00000636214 OR5H6Q8NGV6 325 aa13.7□□□□□ -0.22
PNKP-225ENST00000636214 FYTTD1Q96QD9 318 aaKnown RBP13.7□□□□□ -0.22
PNKP-225ENST00000636214 IFT46Q9NQC8 304 aa13.7□□□□□ -0.22
PNKP-225ENST00000636214 ZNF257Q9Y2Q1 563 aa13.7□□□□□ -0.22
PNKP-225ENST00000636214 AIREO43918 545 aa13.69□□□□□ -0.22
PNKP-225ENST00000636214 TRBV12-3P01733 135 aa13.69□□□□□ -0.22
PNKP-225ENST00000636214 IGHV4-30-4P0DP06 118 aa13.69□□□□□ -0.22
PNKP-225ENST00000636214 SSX9Q7RTT3 188 aa13.69□□□□□ -0.22
PNKP-225ENST00000636214 HOGA1Q86XE5 327 aa13.69□□□□□ -0.22
PNKP-225ENST00000636214 Q8N402 240 aa13.69□□□□□ -0.22
PNKP-225ENST00000636214 GVQW1Q8N7I0 195 aa13.69□□□□□ -0.22
PNKP-225ENST00000636214 ZBTB34Q8NCN2 500 aa13.69□□□□□ -0.22
PNKP-225ENST00000636214 SLC25A38Q96DW6 304 aa13.69□□□□□ -0.22
PNKP-225ENST00000636214 TNFSF12O43508 249 aa13.68□□□□□ -0.22
PNKP-225ENST00000636214 OR2J3O76001 311 aa13.68□□□□□ -0.22
PNKP-225ENST00000636214 PPYP01298 95 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms