RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 ASPHD2Q6ICH7 369 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 RARRES2Q99969 163 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 SH3BGRL3Q9H299 93 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 TNS1Q9HBL0 1735 aaKnown RBP10.92□□□□□ -0.66
SCN8A-209ENST00000627620 THY1P04216 161 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 ANOS1P23352 680 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 CX3CL1P78423 397 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 FAM209AQ5JX71 171 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 SMIM8Q96KF7 97 aa10.92□□□□□ -0.66
SCN8A-209ENST00000627620 NPIPB11E5RHQ5 1161 aa10.91□□□□□ -0.66
SCN8A-209ENST00000627620 SIGLEC5O15389 551 aa10.91□□□□□ -0.66
SCN8A-209ENST00000627620 CFDP00746 253 aaPredicted RBP10.91□□□□□ -0.66
SCN8A-209ENST00000627620 RPLP1P05386 114 aaKnown RBP10.91□□□□□ -0.66
SCN8A-209ENST00000627620 UCP3P55916 312 aa10.91□□□□□ -0.66
SCN8A-209ENST00000627620 PUSL1Q8N0Z8 303 aaKnown RBP10.91□□□□□ -0.66
SCN8A-209ENST00000627620 RAX2Q96IS3 184 aa10.91□□□□□ -0.66
SCN8A-209ENST00000627620 H0YL77 283 aa10.91□□□□□ -0.66
SCN8A-209ENST00000627620 CSRP2Q16527 193 aa10.91□□□□□ -0.66
SCN8A-209ENST00000627620 C2orf83Q53S99 150 aa10.91□□□□□ -0.66
SCN8A-209ENST00000627620 HLA-DQA1P01909 254 aa10.91□□□□□ -0.66
SCN8A-209ENST00000627620 ZNF25P17030 456 aaPredicted RBP10.91□□□□□ -0.66
SCN8A-209ENST00000627620 ZNF146Q15072 292 aa10.91□□□□□ -0.66
SCN8A-209ENST00000627620 RSPO4Q2I0M5 234 aaPredicted RBP10.91□□□□□ -0.66
SCN8A-209ENST00000627620 ELOVL1Q9BW60 279 aa10.91□□□□□ -0.66
SCN8A-209ENST00000627620 IGHV3-48P01763 117 aa10.91□□□□□ -0.66
SCN8A-209ENST00000627620 CRYBB3P26998 211 aa10.91□□□□□ -0.66
SCN8A-209ENST00000627620 APOBEC3AP31941 199 aaPredicted RBP10.91□□□□□ -0.66
SCN8A-209ENST00000627620 FAM27E3Q08E93 113 aa10.91□□□□□ -0.66
SCN8A-209ENST00000627620 TIMM23BQ5SRD1 257 aa10.91□□□□□ -0.66
SCN8A-209ENST00000627620 PEAR1Q5VY43 1037 aaPredicted RBP10.91□□□□□ -0.66
SCN8A-209ENST00000627620 LHFPL5Q8TAF8 219 aa10.91□□□□□ -0.66
SCN8A-209ENST00000627620 NPIPB3Q92617 1050 aa10.91□□□□□ -0.66
SCN8A-209ENST00000627620 FOXH1O75593 365 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 CA2P00918 260 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 GLRXP35754 106 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 SRSF12Q8WXF0 261 aaKnown RBP10.9□□□□□ -0.66
SCN8A-209ENST00000627620 SPSB4Q96A44 273 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 RND3P61587 244 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 RAB37Q96AX2 223 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 MEGF10Q96KG7 1140 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 GP6Q9HCN6 339 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 GCGP01275 180 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 RPS20P60866 119 aaKnown RBP10.9□□□□□ -0.66
SCN8A-209ENST00000627620 RPL39P5Q59GN2 51 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 EEF1AKMT3Q96AZ1 226 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 SGK494Q96LW2 274 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 TP53RKQ96S44 253 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 GDF9O60383 454 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 AMY1AP04745 511 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 GPX1P07203 203 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 NPPCP23582 126 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 HERPUD1Q15011 391 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 NABP2Q9BQ15 211 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 DCTN5Q9BTE1 182 aa10.9□□□□□ -0.66
SCN8A-209ENST00000627620 MRPL18Q9H0U6 180 aaKnown RBP10.9□□□□□ -0.66
SCN8A-209ENST00000627620 AKIRIN1Q9H9L7 192 aaPredicted RBP10.9□□□□□ -0.66
SCN8A-209ENST00000627620 LAIR2Q6ISS4 152 aa10.9□□□□□ -0.67
SCN8A-209ENST00000627620 IGHV3-35A0A0C4DH35 117 aa10.89□□□□□ -0.67
SCN8A-209ENST00000627620 NUDT3O95989 172 aa10.89□□□□□ -0.67
SCN8A-209ENST00000627620 RELQ04864 619 aaPredicted RBP10.89□□□□□ -0.67
SCN8A-209ENST00000627620 CENPVQ7Z7K6 275 aaPredicted RBP10.89□□□□□ -0.67
SCN8A-209ENST00000627620 DUX5Q96PT3 197 aa10.89□□□□□ -0.67
SCN8A-209ENST00000627620 FOXD3Q9UJU5 478 aaPredicted RBP10.89□□□□□ -0.67
SCN8A-209ENST00000627620 ASXL3Q9C0F0 2248 aa10.89□□□□□ -0.67
SCN8A-209ENST00000627620 IGKV3D-11A0A0A0MRZ8 115 aa10.89□□□□□ -0.67
SCN8A-209ENST00000627620 ZNF883P0CG24 379 aa10.89□□□□□ -0.67
SCN8A-209ENST00000627620 WDR25Q64LD2 544 aaPredicted RBP10.89□□□□□ -0.67
SCN8A-209ENST00000627620 GALNT14Q96FL9 552 aa10.89□□□□□ -0.67
SCN8A-209ENST00000627620 TGIF2-C20orf24A0A0A6YYL0 155 aa10.89□□□□□ -0.67
SCN8A-209ENST00000627620 CECR9P0C854 216 aa10.89□□□□□ -0.67
SCN8A-209ENST00000627620 ACP7Q6ZNF0 438 aa10.89□□□□□ -0.67
SCN8A-209ENST00000627620 POC1AQ8NBT0 407 aa10.89□□□□□ -0.67
SCN8A-209ENST00000627620 NEU1Q99519 415 aa10.89□□□□□ -0.67
SCN8A-209ENST00000627620 C19orf24Q9BVV8 132 aa10.89□□□□□ -0.67
SCN8A-209ENST00000627620 MAP1LC3AQ9H492 121 aa10.89□□□□□ -0.67
SCN8A-209ENST00000627620 TMEM106BQ9NUM4 274 aa10.89□□□□□ -0.67
SCN8A-209ENST00000627620 CKAP5Q14008 2032 aa10.89□□□□□ -0.67
SCN8A-209ENST00000627620 C1QL2Q7Z5L3 287 aa10.89□□□□□ -0.67
SCN8A-209ENST00000627620 COL11A1P12107 1806 aaPredicted RBP10.89□□□□□ -0.67
SCN8A-209ENST00000627620 FAM181BA6NEQ2 426 aa10.88□□□□□ -0.67
SCN8A-209ENST00000627620 FAM186AA6NE01 2351 aa10.88□□□□□ -0.67
SCN8A-209ENST00000627620 IGKV1D-43A0A0B4J1Z2 117 aa10.88□□□□□ -0.67
SCN8A-209ENST00000627620 IL4P05112 153 aa10.88□□□□□ -0.67
SCN8A-209ENST00000627620 AGAP20933 346 aa10.88□□□□□ -0.67
SCN8A-209ENST00000627620 RAB9AP51151 201 aa10.88□□□□□ -0.67
SCN8A-209ENST00000627620 TGFBR3LH3BV60 316 aa10.88□□□□□ -0.67
SCN8A-209ENST00000627620 LEPROTL1O95214 131 aa10.88□□□□□ -0.67
SCN8A-209ENST00000627620 MOSP00540 346 aa10.88□□□□□ -0.67
SCN8A-209ENST00000627620 DANCRP0C864 163 aa10.88□□□□□ -0.67
SCN8A-209ENST00000627620 OR11H4Q8NGC9 324 aa10.88□□□□□ -0.67
SCN8A-209ENST00000627620 COL25A1Q9BXS0 654 aaPredicted RBP10.88□□□□□ -0.67
SCN8A-209ENST00000627620 MRPL32Q9BYC8 188 aaKnown RBP10.88□□□□□ -0.67
SCN8A-209ENST00000627620 A0A0G2JMM0 328 aa10.87□□□□□ -0.67
SCN8A-209ENST00000627620 A0A1W2PPB8 328 aa10.87□□□□□ -0.67
SCN8A-209ENST00000627620 A0A1W2PRS3 328 aa10.87□□□□□ -0.67
SCN8A-209ENST00000627620 KIR3DP1A8MWS1 328 aa10.87□□□□□ -0.67
SCN8A-209ENST00000627620 H7C2G1 150 aa10.87□□□□□ -0.67
SCN8A-209ENST00000627620 TSPOP30536 169 aa10.87□□□□□ -0.67
SCN8A-209ENST00000627620 ZNFX1Q9P2E3 1918 aaKnown RBP10.87□□□□□ -0.67
SCN8A-209ENST00000627620 GOLT1AQ6ZVE7 132 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms